Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39006 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 2.8e-85 318.5 157 100.0
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 2.1e-32 142.9 85 77.6
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 2.1e-32 142.9 85 77.6
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 2.1e-32 142.9 85 80.0
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 2.1e-32 142.9 85 77.6
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 6.1e-32 141.4 88 73.9
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 8.0e-32 141.0 85 77.6
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 8.0e-32 141.0 85 76.5
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 1.4e-31 140.2 75 85.3
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 1.8e-31 139.8 85 76.5
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 2.3e-31 139.4 75 85.3
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 3.0e-31 139.0 85 75.3
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 3.0e-31 139.0 85 74.1
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 4.0e-31 138.7 88 71.6
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 5.2e-31 138.3 85 74.1
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 5.2e-31 138.3 85 75.3
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 6.7e-31 137.9 85 74.1
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 6.7e-31 137.9 85 74.1
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 6.7e-31 137.9 85 74.1
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 6.7e-31 137.9 85 74.1
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 6.7e-31 137.9 85 74.1
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 8.8e-31 137.5 117 57.3
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 8.8e-31 137.5 75 82.7
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 8.8e-31 137.5 75 82.7
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 8.8e-31 137.5 75 84.0
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 1.2e-30 137.1 85 72.9
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 1.2e-30 137.1 75 81.3
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 1.5e-30 136.7 85 74.1
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 1.5e-30 136.7 88 71.6
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 1.5e-30 136.7 85 74.1
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 1.5e-30 136.7 85 74.1
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 1.5e-30 136.7 85 72.9
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 1.5e-30 136.7 85 72.9
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 2.0e-30 136.3 83 73.5
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 2.6e-30 136.0 85 72.9
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 2.6e-30 136.0 85 70.6
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 2.6e-30 136.0 85 72.9
Sc12g0008350 Simmondsia chinensis HOM05D005969 ORTHO05D007407 2.6e-30 136.0 86 75.6
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 2.6e-30 136.0 85 71.8
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 2.6e-30 136.0 85 71.8
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 4.4e-30 135.2 85 71.8
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 4.4e-30 135.2 85 70.6
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 4.4e-30 135.2 75 81.3
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 4.4e-30 135.2 85 70.6
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 4.4e-30 135.2 85 70.6
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 5.7e-30 134.8 85 70.6
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 5.7e-30 134.8 75 81.3
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 5.7e-30 134.8 85 71.8
CBR_g50572 Chara braunii HOM05D000019 ORTHO05D000048 7.5e-30 134.4 76 80.3
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 7.5e-30 134.4 85 70.6
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 7.5e-30 134.4 85 70.6
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 9.7e-30 134.0 75 80.0
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 9.7e-30 134.0 75 80.0
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 9.7e-30 134.0 85 72.9
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 1.3e-29 133.7 75 80.0
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 1.3e-29 133.7 75 80.0
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 1.3e-29 133.7 75 78.7
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 1.3e-29 133.7 122 54.1
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 1.7e-29 133.3 85 70.6
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 1.7e-29 133.3 85 71.8
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 1.7e-29 133.3 75 80.0
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 1.7e-29 133.3 75 78.7
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 1.7e-29 133.3 88 67.0
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 1.7e-29 133.3 85 71.8
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 2.8e-29 132.5 85 69.4
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 2.8e-29 132.5 85 70.6
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 2.8e-29 132.5 75 80.0
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 3.7e-29 132.1 85 69.4
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 3.7e-29 132.1 85 70.6
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 3.7e-29 132.1 85 68.2
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 3.7e-29 132.1 83 72.3
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 4.8e-29 131.7 75 77.3
Ca_20538_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 4.8e-29 131.7 75 77.3
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 4.8e-29 131.7 75 77.3
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 4.8e-29 131.7 85 67.1
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 6.3e-29 131.3 85 70.6
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 8.2e-29 131.0 85 69.4
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 8.2e-29 131.0 75 78.7
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 8.2e-29 131.0 75 78.7
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 1.1e-28 130.6 84 69.0
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 1.1e-28 130.6 75 77.3
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 1.1e-28 130.6 75 77.3
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 1.1e-28 130.6 75 77.3
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 1.8e-28 129.8 85 67.1
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 2.4e-28 129.4 75 77.3
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 2.4e-28 129.4 75 76.0
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 3.1e-28 129.0 75 76.0
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 3.1e-28 129.0 83 72.3
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 4.1e-28 128.6 75 77.3
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 4.1e-28 128.6 75 77.3
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 5.3e-28 128.3 75 77.3
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 9.1e-28 127.5 75 76.0
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 1.2e-27 127.1 85 65.9
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 1.2e-27 127.1 73 76.7
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 4.5e-27 125.2 90 64.4
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 4.5e-27 125.2 73 74.0
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 4.5e-27 125.2 73 74.0
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 4.5e-27 125.2 73 74.0
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 1.1e-25 120.6 98 59.2
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 1.5e-25 120.2 75 73.3
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 5.2e-23 111.7 78 67.9
Hma1.2p1_0109F.1_g052630 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 6.8e-23 111.3 88 60.2
MCO01G214 Micromonas commoda HOM05D005969 ORTHO05D007407 1.3e-21 107.1 67 68.7
MCO01G215 Micromonas commoda HOM05D005969 ORTHO05D007407 1.3e-21 107.1 67 68.7
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 7.0e-20 101.3 64 70.3
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 2.0e-19 99.8 78 62.8
Cre03.g184550 Chlamydomonas reinhardtii HOM05D005969 ORTHO05D007407 3.5e-19 99.0 89 52.8
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 1.0e-18 97.4 55 72.7
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 3.8e-18 95.5 54 79.6
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 3.8e-18 95.5 54 79.6
PRCOL_00001281 Prasinoderma coloniale HOM05D005969 ORTHO05D007407 6.5e-18 94.7 65 66.2
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 1.6e-16 90.1 56 73.2
QL04p063552 Quercus lobata HOM05D005969 ORTHO05D007407 6.1e-16 88.2 76 57.9
MCO09G747 Micromonas commoda HOM05D005969 ORTHO05D007407 2.8e-13 79.3 90 46.7
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 1.4e-07 60.5 80 46.2


User provided reference genes

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