Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38950 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 1.1e-280 969.5 562 100.0
SEGI_00740 Sequoiadendron giganteum HOM05D000047 ORTHO05D011008 7.9e-90 335.5 259 92.7
SEGI_00295 Sequoiadendron giganteum HOM05D000047 ORTHO05D011008 6.7e-89 332.4 249 95.2
SEGI_22773 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 2.2e-68 264.2 253 81.8
SEGI_17862 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 1.9e-67 261.2 250 80.0
SEGI_31842 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 9.4e-67 258.8 251 79.3
SEGI_15132 Sequoiadendron giganteum HOM05D000109 ORTHO05D011008 1.8e-57 228.0 170 67.1
SEGI_41541 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 3.0e-57 227.3 229 81.7
SEGI_04714 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 2.5e-51 207.6 297 65.3
SEGI_17955 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 5.2e-49 199.9 299 64.2
SEGI_16141 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 2.2e-44 184.5 282 66.0
SEGI_05418 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 5.0e-44 183.3 298 63.1
SEGI_33052 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 1.1e-43 182.2 298 62.4
SEGI_06696 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 1.6e-42 178.3 249 65.1
SEGI_40733 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 1.4e-41 175.3 250 66.8
SEGI_00748 Sequoiadendron giganteum HOM05D000622 ORTHO05D000475 7.5e-40 169.5 106 75.5
SEGI_01089 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 8.6e-36 156.0 257 62.6
SEGI_24097 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 1.1e-35 155.6 220 70.0
SEGI_19443 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 3.6e-34 150.6 223 69.5
SEGI_16701 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 2.3e-33 147.9 223 69.5
SEGI_09778 Sequoiadendron giganteum HOM05D000060 ORTHO05D004147 5.2e-33 146.7 89 79.8
SEGI_09710 Sequoiadendron giganteum HOM05D000006 ORTHO05D011008 4.4e-32 143.7 261 64.0
SEGI_40105 Sequoiadendron giganteum HOM05D000021 ORTHO05D037596 4.9e-31 140.2 251 64.5
SEGI_41530 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 3.2e-30 137.5 227 64.8
SEGI_28902 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 1.1e-27 129.0 269 63.2
SEGI_37285 Sequoiadendron giganteum HOM05D012660 ORTHO05D012113 5.6e-27 126.7 108 60.2
SEGI_38170 Sequoiadendron giganteum HOM05D000605 ORTHO05D011008 2.1e-26 124.8 211 67.8
SEGI_02564 Sequoiadendron giganteum HOM05D000379 ORTHO05D000254 1.4e-22 112.1 102 60.8
SEGI_25535 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 4.1e-22 110.5 240 63.3
SEGI_08801 Sequoiadendron giganteum HOM05D012660 ORTHO05D012113 7.0e-22 109.8 60 85.0
SEGI_30872 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 4.6e-21 107.1 85 70.6
SEGI_40170 Sequoiadendron giganteum HOM05D000042 ORTHO05D000028 4.6e-21 107.1 73 78.1
SEGI_13797 Sequoiadendron giganteum HOM05D000021 ORTHO05D011008 2.8e-18 97.8 119 57.1
SEGI_32598 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 9.8e-16 89.4 208 27.4
SEGI_15013 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 1.1e-14 85.9 187 25.1
SEGI_05863 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 3.5e-13 80.9 93 50.5
SEGI_24478 Sequoiadendron giganteum HOM05D010493 ORTHO05D012113 7.8e-13 79.7 88 45.5
AagrBONN_evm.TU.Sc2ySwM_368.1473 Anthoceros agrestis HOM05D013037 ORTHO05D017308 8.6e-12 76.3 244 48.4
SEGI_20438 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 5.6e-11 73.6 194 23.7
SMO014G0034 Selaginella moellendorffii HOM05D000071 ORTHO05D000029 9.5e-11 72.8 120 34.2
AagrBONN_evm.TU.Sc2ySwM_362.211 Anthoceros agrestis HOM05D013037 ORTHO05D017308 2.8e-10 71.2 183 58.5
SEGI_12253 Sequoiadendron giganteum HOM05D035279 ORTHO05D011008 3.6e-10 70.9 111 41.4
SEGI_09656 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 6.2e-10 70.1 171 23.4
SEGI_33054 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 8.1e-10 69.7 333 25.2
SEGI_38046 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 3.1e-09 67.8 174 28.7
SEGI_01196 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 8.9e-09 66.2 52 61.5
SEGI_15559 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 8.9e-09 66.2 56 53.6
Manes.03G091144 Manihot esculenta HOM05D000053 ORTHO05D000035 1.2e-08 65.9 255 49.8
Actinidia28181 Actinidia chinensis HOM05D000003 ORTHO05D000007 2.6e-08 64.7 196 26.5
SEGI_14645 Sequoiadendron giganteum HOM05D010493 ORTHO05D011008 2.6e-08 64.7 124 29.8
Ciclev10017448m.g Citrus clementina HOM05D000053 ORTHO05D000035 4.4e-08 63.9 253 49.0
Eucgr.F00512 Eucalyptus grandis HOM05D000053 ORTHO05D000035 5.8e-08 63.5 253 49.4
Actinidia11565 Actinidia chinensis HOM05D000053 ORTHO05D000448 1.3e-07 62.4 199 55.8
AagrBONN_evm.TU.Sc2ySwM_362.852 Anthoceros agrestis HOM05D013037 ORTHO05D017308 1.3e-07 62.4 67 44.8
AagrBONN_evm.TU.Sc2ySwM_362.1443 Anthoceros agrestis HOM05D013037 ORTHO05D000010 1.7e-07 62.0 186 58.1
SEGI_18939 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.2e-07 61.6 167 24.6
Ciclev10017514m.g Citrus clementina HOM05D000053 ORTHO05D000035 2.9e-07 61.2 254 46.9
Ciclev10018217m.g Citrus clementina HOM05D000053 ORTHO05D000035 2.9e-07 61.2 119 35.3
Ciclev10018245m.g Citrus clementina HOM05D000053 ORTHO05D000035 2.9e-07 61.2 262 47.7
DCAR_028661 Daucus carota HOM05D000053 ORTHO05D000035 2.9e-07 61.2 199 55.8
Lj8C67G6 Lonicera japonica HOM05D000053 ORTHO05D000035 3.8e-07 60.8 254 44.9
Actinidia20749 Actinidia chinensis HOM05D000053 ORTHO05D000448 4.9e-07 60.5 193 55.4
Potri.001G389100 Populus trichocarpa HOM05D000053 ORTHO05D000035 4.9e-07 60.5 251 48.2
Actinidia10935 Actinidia chinensis HOM05D000003 ORTHO05D000006 6.4e-07 60.1 214 24.8
Ciclev10017615m.g Citrus clementina HOM05D000053 ORTHO05D000035 6.4e-07 60.1 254 46.1
ECA240G4606 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.4e-07 60.1 195 25.1
Eucgr.F00281 Eucalyptus grandis HOM05D000053 ORTHO05D000035 6.4e-07 60.1 215 53.5
SalBow5G1696 Salvia bowleyana HOM05D000053 ORTHO05D000448 6.4e-07 60.1 195 53.8
Thecc.07G021300 Theobroma cacao HOM05D000053 ORTHO05D000035 6.4e-07 60.1 254 46.9
Carub.0001s3650 Capsella rubella HOM05D000053 ORTHO05D000035 8.4e-07 59.7 252 46.8
Actinidia29086 Actinidia chinensis HOM05D000053 ORTHO05D000448 1.1e-06 59.3 190 57.4
SMO137G0287 Selaginella moellendorffii HOM05D026225 ORTHO05D026132 1.1e-06 59.3 206 56.8
Ciclev10019718m.g Citrus clementina HOM05D000053 ORTHO05D000035 1.4e-06 58.9 253 48.2
DCAR_008732 Daucus carota HOM05D000053 ORTHO05D000035 1.4e-06 58.9 117 34.2
ECA246G5041 Erigeron canadensis HOM05D000003 ORTHO05D000007 1.4e-06 58.9 253 24.5
HanXRQChr15g0463951 Helianthus annuus HOM05D000053 ORTHO05D000448 1.4e-06 58.9 281 44.8
Manes.10G024026 Manihot esculenta HOM05D000053 ORTHO05D000035 1.4e-06 58.9 244 47.1
SalBow5G3751 Salvia bowleyana HOM05D000053 ORTHO05D000448 1.4e-06 58.9 195 53.3
SMO162G0002 Selaginella moellendorffii HOM05D026225 ORTHO05D026132 1.4e-06 58.9 213 55.4
TAR624G1398 Trochodendron aralioides HOM05D000053 ORTHO05D000035 1.4e-06 58.9 116 35.3
Pp3c20_20430 Physcomitrium patens HOM05D009352 ORTHO05D017073 1.9e-06 58.5 122 29.5
THA.LOC104818687 Tarenaya hassleriana HOM05D000053 ORTHO05D000035 1.9e-06 58.5 259 47.9
Thecc.07G021700 Theobroma cacao HOM05D000053 ORTHO05D000035 1.9e-06 58.5 254 46.5
TPR.G20719 Trifolium pratense HOM05D000071 ORTHO05D000029 1.9e-06 58.5 244 49.2
COL.COLO4_38381 Corchorus olitorius HOM05D000053 ORTHO05D000035 2.4e-06 58.2 250 46.4
THA.LOC104818688 Tarenaya hassleriana HOM05D000053 ORTHO05D000035 2.4e-06 58.2 264 48.5
TPR.G29942 Trifolium pratense HOM05D000071 ORTHO05D000029 2.4e-06 58.2 244 46.7
Dinv26617 Davidia involucrata HOM05D000053 ORTHO05D000035 3.2e-06 57.8 254 46.9
ECA238G4448 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.2e-06 57.8 110 31.8
Migut.L02032 Erythranthe guttata HOM05D000053 ORTHO05D000448 3.2e-06 57.8 181 61.3
Lsat_1_v5_gn_9_10221 Lactuca sativa HOM05D000053 ORTHO05D000035 3.2e-06 57.8 264 47.0
Os04g0480500 Oryza sativa ssp. japonica HOM05D000053 ORTHO05D000448 3.2e-06 57.8 243 50.2
Prupe.2G130600 Prunus persica HOM05D000053 ORTHO05D000035 3.2e-06 57.8 263 44.1
AagrBONN_evm.TU.Sc2ySwM_368.2811 Anthoceros agrestis HOM05D013037 ORTHO05D017308 4.1e-06 57.4 51 51.0
Eucgr.E01227 Eucalyptus grandis HOM05D000053 ORTHO05D000035 4.1e-06 57.4 243 48.1
Eucgr.F00285 Eucalyptus grandis HOM05D000053 ORTHO05D000035 4.1e-06 57.4 204 55.9
Manes.10G024300 Manihot esculenta HOM05D000053 ORTHO05D000035 4.1e-06 57.4 244 46.7
DCAR_004682 Daucus carota HOM05D000053 ORTHO05D000035 5.4e-06 57.0 116 34.5
Eucgr.F00292 Eucalyptus grandis HOM05D000053 ORTHO05D000035 5.4e-06 57.0 211 55.5
Oeu063386.1 Olea europaea HOM05D000053 ORTHO05D000448 5.4e-06 57.0 214 51.4
THA.LOC104799464 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 5.4e-06 57.0 182 28.6
Thecc.07G004600 Theobroma cacao HOM05D000053 ORTHO05D000035 5.4e-06 57.0 260 47.3
GSVIVG01012274001 Vitis vinifera HOM05D000053 ORTHO05D000035 5.4e-06 57.0 251 48.2
Migut.F01641 Erythranthe guttata HOM05D000053 ORTHO05D000035 7.1e-06 56.6 116 36.2
Manes.10G023801 Manihot esculenta HOM05D000053 ORTHO05D000035 7.1e-06 56.6 276 44.2
SHI19270 Sapria himalayana HOM05D000003 ORTHO05D000007 7.1e-06 56.6 162 29.0
Sopen12g007030 Solanum pennellii HOM05D000053 ORTHO05D000035 7.1e-06 56.6 257 46.7
Thecc.07G004300 Theobroma cacao HOM05D000053 ORTHO05D000035 7.1e-06 56.6 267 46.8
SMO228G0161 Selaginella moellendorffii HOM05D000053 ORTHO05D000035 9.2e-06 56.2 112 44.6
Solyc12g009780.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 9.2e-06 56.2 116 34.5


User provided reference genes

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