Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 3.5e-286 987.6 519 100.0
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 1.6e-222 776.2 521 77.5
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 7.5e-220 767.3 514 76.7
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 1.7e-219 766.1 515 77.3
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 2.4e-218 762.3 501 78.2
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 4.1e-218 761.5 501 77.2
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 7.0e-218 760.8 501 76.2
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 1.2e-217 760.0 512 75.6
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.6e-217 759.6 515 75.5
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 2.0e-217 759.2 502 77.3
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 2.7e-217 758.8 512 75.6
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 2.7e-217 758.8 515 75.5
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 3.5e-217 758.4 515 75.5
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 7.8e-217 757.3 503 76.3
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 7.8e-217 757.3 519 75.5
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.0e-216 756.9 515 75.3
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 1.0e-216 756.9 515 74.8
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 2.3e-216 755.7 519 75.5
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 2.9e-216 755.4 501 76.4
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 1.9e-215 752.7 517 74.3
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 3.3e-215 751.9 501 76.2
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 4.3e-215 751.5 517 74.9
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 5.6e-215 751.1 518 74.9
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 1.2e-214 750.0 501 76.2
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 1.2e-214 750.0 520 74.6
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 4.7e-214 748.0 514 74.3
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 4.7e-214 748.0 502 76.1
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 4.7e-214 748.0 511 75.3
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 6.2e-214 747.7 523 73.4
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 6.2e-214 747.7 517 73.9
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 1.4e-213 746.5 501 75.4
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 2.0e-212 742.7 518 73.7
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 2.0e-212 742.7 516 74.0
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 4.4e-212 741.5 521 72.6
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 4.4e-212 741.5 499 76.0
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 1.7e-211 739.6 507 75.7
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 8.3e-211 737.3 503 75.3
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 3.2e-210 735.3 501 73.7
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 5.4e-210 734.6 505 73.5
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 1.7e-208 729.6 505 73.1
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 3.0e-208 728.8 501 73.1
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 1.1e-207 726.9 508 74.2
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 1.1e-207 726.9 509 73.3
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 1.1e-207 726.9 515 72.2
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 1.5e-207 726.5 530 71.5
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 2.5e-207 725.7 501 73.3
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 3.3e-207 725.3 521 72.6
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 4.3e-207 724.9 515 72.2
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 4.3e-207 724.9 530 71.3
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 7.3e-207 724.2 517 71.0
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 8.1e-206 720.7 514 71.6
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 1.1e-205 720.3 530 70.8
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 5.2e-205 718.0 534 70.4
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 6.8e-205 717.6 500 71.4
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 8.9e-205 717.2 505 71.7
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 8.9e-205 717.2 509 72.1
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 2.6e-204 715.7 509 71.9
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 4.4e-204 714.9 517 71.4
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 9.8e-204 713.8 508 72.0
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 9.8e-204 713.8 528 69.7
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 1.9e-202 709.5 506 71.1
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 2.1e-201 706.1 501 73.3
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 2.7e-201 705.7 528 69.3
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 3.5e-201 705.3 520 70.4
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 3.9e-200 701.8 515 69.9
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 1.9e-199 699.5 502 72.7
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.5e-199 699.1 514 70.2
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 3.3e-199 698.7 522 69.0
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.3e-199 698.7 516 70.3
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 2.8e-198 695.7 502 71.9
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 8.1e-198 694.1 520 69.4
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 8.1e-198 694.1 516 69.6
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 2.3e-197 692.6 588 63.1
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 6.8e-197 691.0 507 73.0
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 8.9e-197 690.6 501 70.9
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.2e-196 690.3 503 71.2
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 3.4e-196 688.7 519 68.2
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 5.4e-194 681.4 501 70.9
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 7.1e-194 681.0 518 69.3
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 1.2e-193 680.2 524 67.9
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 3.5e-193 678.7 519 68.6
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 6.6e-192 674.5 486 74.5
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.6e-190 669.8 629 60.3
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 3.1e-189 665.6 514 67.7
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 3.4e-188 662.1 517 66.7
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 3.0e-184 649.0 515 65.0
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 1.1e-183 647.1 459 73.0
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 2.1e-182 642.9 502 65.1
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 2.1e-182 642.9 502 65.1
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 3.4e-180 635.6 503 66.4
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 6.0e-177 624.8 620 58.1
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 2.3e-176 622.9 462 69.5
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 3.3e-175 619.0 559 60.1
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 5.3e-173 611.7 524 63.2
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 7.6e-172 607.8 426 73.9
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 2.3e-168 596.3 528 58.7
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 8.7e-168 594.3 443 71.3
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 2.8e-158 562.8 487 58.7
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 4.2e-154 548.9 369 75.6
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 9.3e-154 547.7 432 67.4
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 4.1e-141 505.8 358 71.2
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 3.2e-138 496.1 381 68.5
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 4.4e-135 485.7 335 75.8
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 1.1e-130 471.1 328 74.1
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 2.1e-121 440.3 322 70.2
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 5.9e-108 395.6 249 79.1
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 7.7e-108 395.2 249 79.1
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 2.9e-107 393.3 518 44.2
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 4.4e-103 379.4 486 44.7
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 1.4e-96 357.8 446 51.1
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 2.9e-94 350.1 240 73.8
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 3.0e-91 340.1 489 39.9
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 6.4e-70 269.2 327 50.8
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 2.8e-65 253.8 173 72.3
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 9.6e-50 202.2 499 33.1
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-48 198.0 506 34.2
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 6.9e-48 196.1 172 61.6
Cfa023088 Carpinus fangiana HOM05D004787 ORTHO05D006972 5.8e-47 193.0 511 32.1
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 1.1e-42 178.7 112 78.6
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 4.1e-40 170.2 291 41.6
Medtr8g023320 Medicago truncatula HOM05D004787 ORTHO05D006972 2.3e-35 154.5 129 64.3
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 6.7e-35 152.9 514 30.0
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-32 145.6 471 31.0
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 1.4e-32 145.2 459 30.9
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 2.1e-28 131.3 298 35.6
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 4.6e-28 130.2 293 35.5
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 2.3e-27 127.9 86 67.4
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-24 119.0 222 39.2
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-23 115.5 331 32.9
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 3.4e-23 114.0 299 32.8
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 6.5e-22 109.8 208 38.0
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 4.2e-21 107.1 155 41.9
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 2.7e-20 104.4 210 38.1
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 1.0e-19 102.4 265 30.9
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 1.4e-19 102.1 155 40.6
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 2.0e-18 98.2 156 40.4
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 2.0e-18 98.2 156 40.4
Zm00001eb168130 Zea mays HOM05D004787 ORTHO05D001664 2.6e-18 97.8 149 42.3
HanXRQChr16g0532231 Helianthus annuus HOM05D004787 ORTHO05D006972 5.7e-18 96.7 59 72.9
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 3.7e-17 94.0 339 29.8
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 6.3e-17 93.2 366 28.1
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 1.8e-16 91.7 339 29.5
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 7.0e-16 89.7 244 29.9
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 5.9e-15 86.7 304 27.6
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 5.0e-14 83.6 340 28.5
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 2.5e-13 81.3 141 42.6
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 8.0e-12 76.3 294 28.9


User provided reference genes

Program Settings