Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 5.2e-96 354.4 179 100.0
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.4e-53 213.4 111 98.2
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 1.5e-34 150.2 115 65.2
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 7.4e-34 147.9 108 65.7
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 7.4e-34 147.9 108 65.7
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 7.4e-34 147.9 108 65.7
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 7.4e-34 147.9 108 65.7
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 7.4e-34 147.9 114 64.9
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 9.7e-34 147.5 110 64.5
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 9.7e-34 147.5 114 64.9
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 2.2e-33 146.4 114 64.0
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 8.2e-33 144.4 108 63.9
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 1.1e-32 144.1 107 63.6
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 1.1e-32 144.1 107 66.4
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 1.4e-32 143.7 107 65.4
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 2.4e-32 142.9 107 62.6
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 2.4e-32 142.9 107 66.4
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 3.1e-32 142.5 107 62.6
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 3.1e-32 142.5 107 64.5
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 7.0e-32 141.4 107 62.6
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 7.0e-32 141.4 107 63.6
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 7.0e-32 141.4 107 63.6
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 7.0e-32 141.4 108 63.9
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.2e-31 140.6 107 63.6
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 1.2e-31 140.6 112 63.4
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 2.0e-31 139.8 107 62.6
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 2.0e-31 139.8 107 62.6
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 2.0e-31 139.8 107 63.6
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 2.0e-31 139.8 107 65.4
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 2.0e-31 139.8 107 64.5
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 2.0e-31 139.8 107 63.6
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 2.0e-31 139.8 108 61.1
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 2.6e-31 139.4 125 57.6
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 3.5e-31 139.0 107 62.6
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 3.5e-31 139.0 107 62.6
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 4.5e-31 138.7 107 62.6
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 4.5e-31 138.7 107 62.6
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 4.5e-31 138.7 108 63.0
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 5.9e-31 138.3 107 63.6
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 5.9e-31 138.3 108 60.2
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 7.7e-31 137.9 107 61.7
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 7.7e-31 137.9 107 61.7
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 7.7e-31 137.9 107 64.5
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 7.7e-31 137.9 125 56.8
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 7.7e-31 137.9 107 61.7
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 7.7e-31 137.9 113 58.4
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 7.7e-31 137.9 109 61.5
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.0e-30 137.5 107 60.7
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 1.0e-30 137.5 107 64.5
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 1.0e-30 137.5 120 57.5
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 1.3e-30 137.1 107 61.7
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 1.3e-30 137.1 107 61.7
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.7e-30 136.7 97 67.0
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 1.7e-30 136.7 107 65.4
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 1.7e-30 136.7 107 63.6
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 1.7e-30 136.7 107 64.5
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 1.7e-30 136.7 108 59.3
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 1.7e-30 136.7 107 59.8
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 1.7e-30 136.7 124 56.5
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.2e-30 136.3 107 62.6
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 2.2e-30 136.3 107 60.7
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 2.9e-30 136.0 113 57.5
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 2.9e-30 136.0 107 60.7
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 2.9e-30 136.0 107 62.6
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 3.8e-30 135.6 107 61.7
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.8e-30 135.6 107 61.7
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 3.8e-30 135.6 107 59.8
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 3.8e-30 135.6 107 64.5
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 5.0e-30 135.2 106 64.2
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 8.5e-30 134.4 105 63.8
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 8.5e-30 134.4 107 60.7
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 8.5e-30 134.4 107 60.7
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 8.5e-30 134.4 107 61.7
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 1.1e-29 134.0 107 61.7
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 1.1e-29 134.0 110 60.0
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 1.1e-29 134.0 107 58.9
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 1.1e-29 134.0 107 61.7
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.5e-29 133.7 107 59.8
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 2.5e-29 132.9 97 67.0
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 2.5e-29 132.9 107 60.7
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 4.2e-29 132.1 107 60.7
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 4.2e-29 132.1 107 61.7
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 4.2e-29 132.1 119 56.3
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 4.2e-29 132.1 119 56.3
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 5.5e-29 131.7 107 59.8
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 1.2e-28 130.6 117 57.3
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 1.6e-28 130.2 107 60.7
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 2.1e-28 129.8 108 56.5
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 2.7e-28 129.4 107 58.9
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 1.4e-27 127.1 108 58.3
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 3.0e-27 125.9 140 49.3
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 6.7e-27 124.8 107 57.0
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 6.7e-27 124.8 107 59.8
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.5e-26 123.6 99 59.6
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 5.7e-26 121.7 96 63.5
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 7.4e-26 121.3 112 53.6
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 6.3e-25 118.2 107 54.2
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 8.2e-25 117.9 115 53.9
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 1.3e-22 110.5 76 71.1
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 1.3e-22 110.5 78 70.5
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 2.2e-22 109.8 74 70.3
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 3.8e-22 109.0 108 54.6
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 3.8e-22 109.0 76 71.1
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 6.5e-22 108.2 101 51.5
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 8.5e-22 107.8 76 69.7
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 5.5e-21 105.1 75 68.0
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 2.7e-20 102.8 73 71.2
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 1.3e-17 94.0 91 48.4
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 1.7e-17 93.6 66 66.7
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 5.9e-15 85.1 73 57.5
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 5.9e-15 85.1 75 54.7
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 1.5e-13 80.5 110 36.4
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 1.0e-11 74.3 131 37.4
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 3.0e-11 72.8 90 41.1


User provided reference genes

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