Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38788 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 0.0e+00 1376.7 715 100.0
CSS0049486 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 0.0e+00 1128.6 704 81.7
CSS0032490 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 0.0e+00 1127.9 704 81.8
Dinv37416 Davidia involucrata HOM05D004914 ORTHO05D006512 0.0e+00 1127.9 702 81.2
TAR375G1103 Trochodendron aralioides HOM05D004914 ORTHO05D006512 0.0e+00 1127.5 700 80.9
Medtr5g026640 Medicago truncatula HOM05D004914 ORTHO05D006512 0.0e+00 1126.3 705 79.9
Atru.chr6.2105 Acer truncatum HOM05D004914 ORTHO05D006512 0.0e+00 1121.7 700 81.7
Nn1g02045 Nelumbo nucifera HOM05D004914 ORTHO05D006512 0.0e+00 1121.7 702 80.5
Ciclev10000444m.g Citrus clementina HOM05D004914 ORTHO05D006512 0.0e+00 1121.3 702 80.2
Eucgr.E01217 Eucalyptus grandis HOM05D004914 ORTHO05D006512 0.0e+00 1119.8 701 80.7
MSTRG.25735 Avicennia marina HOM05D004914 ORTHO05D006512 0.0e+00 1115.9 702 79.5
ATR0829G119 Amborella trichopoda HOM05D004914 ORTHO05D006512 0.0e+00 1114.8 704 79.7
Peaxi162Scf00053g00525 Petunia axillaris HOM05D004914 ORTHO05D006512 0.0e+00 1112.8 699 80.3
CiPaw.13G121600 Carya illinoinensis HOM05D004914 ORTHO05D006512 0.0e+00 1112.1 697 79.2
GSVIVG01022810001 Vitis vinifera HOM05D004914 ORTHO05D006512 0.0e+00 1112.1 699 79.7
HanXRQChr13g0411091 Helianthus annuus HOM05D004914 ORTHO05D006512 0.0e+00 1108.2 695 80.3
Psat2g142640 Pisum sativum HOM05D004914 ORTHO05D006512 0.0e+00 1107.4 703 79.1
Cc08_g05310 Coffea canephora HOM05D004914 ORTHO05D006512 0.0e+00 1106.7 706 79.2
Aqoxy7G00885 Aquilegia oxysepala HOM05D004914 ORTHO05D006512 0.0e+00 1105.9 704 79.4
CANSAT35G0949 Cannabis sativa HOM05D004914 ORTHO05D006512 0.0e+00 1105.9 699 79.1
Lj2g0015407 Lotus japonicus HOM05D004914 ORTHO05D006512 0.0e+00 1105.9 693 80.2
TPR.G17253 Trifolium pratense HOM05D004914 ORTHO05D006512 0.0e+00 1105.9 699 79.5
Oeu046797.1 Olea europaea HOM05D004914 ORTHO05D006512 0.0e+00 1104.7 708 78.8
Eucgr.E01215 Eucalyptus grandis HOM05D004914 ORTHO05D006512 0.0e+00 1104.4 701 80.3
Nn3g19257 Nelumbo nucifera HOM05D004914 ORTHO05D006512 0.0e+00 1103.6 705 79.7
TWI12G0750 Tripterygium wilfordii HOM05D004914 ORTHO05D006512 0.0e+00 1103.2 698 79.8
Solyc08g075570.4 Solanum lycopersicum HOM05D004914 ORTHO05D006512 0.0e+00 1102.8 699 79.4
Phvul.002G127200 Phaseolus vulgaris HOM05D004914 ORTHO05D006512 0.0e+00 1102.4 704 78.3
Potri.003G104000 Populus trichocarpa HOM05D004914 ORTHO05D006512 0.0e+00 1102.4 694 79.5
ECA240G3397 Erigeron canadensis HOM05D004914 ORTHO05D006512 0.0e+00 1101.7 695 79.4
MD06G1017300 Malus domestica HOM05D004914 ORTHO05D006512 0.0e+00 1100.9 699 80.1
PGR042G1968 Punica granatum HOM05D004914 ORTHO05D006512 0.0e+00 1100.1 702 78.6
VMungo1215G3133 Vigna mungo HOM05D004914 ORTHO05D006512 0.0e+00 1099.3 697 79.2
RcHm_v2.0_Chr7g0213721 Rosa chinensis HOM05D004914 ORTHO05D006512 0.0e+00 1099.0 696 80.5
Sopen08g024250 Solanum pennellii HOM05D004914 ORTHO05D006512 0.0e+00 1099.0 699 79.4
Prupe.5G019100 Prunus persica HOM05D004914 ORTHO05D006512 0.0e+00 1098.2 699 79.5
FvH4_5g24140 Fragaria vesca HOM05D004914 ORTHO05D006512 0.0e+00 1095.5 699 79.5
CSS0043328 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 0.0e+00 1094.3 704 79.8
Manes.17G007000 Manihot esculenta HOM05D004914 ORTHO05D006512 0.0e+00 1092.0 706 77.3
Glyma.04G123700 Glycine max HOM05D004914 ORTHO05D006512 0.0e+00 1089.7 697 79.3
Duzib205G0746 Durio zibethinus HOM05D004914 ORTHO05D006512 0.0e+00 1089.3 706 77.5
RcHm_v2.0_Chr7g0213811 Rosa chinensis HOM05D004914 ORTHO05D006512 0.0e+00 1089.3 699 80.0
Lsat_1_v5_gn_5_55660 Lactuca sativa HOM05D004914 ORTHO05D006512 0.0e+00 1085.9 695 77.7
Thecc.03G324700 Theobroma cacao HOM05D004914 ORTHO05D006512 0.0e+00 1082.0 695 78.7
Sabra03G0071100 Salix brachista HOM05D004914 ORTHO05D006512 0.0e+00 1081.6 722 75.8
SalBow4G0569 Salvia bowleyana HOM05D004914 ORTHO05D006512 0.0e+00 1079.3 696 77.9
HPP92_015125 Vanilla planifolia HOM05D004914 ORTHO05D006512 0.0e+00 1077.8 700 78.0
Gorai.005G228700 Gossypium raimondii HOM05D004914 ORTHO05D006512 0.0e+00 1075.5 695 78.4
RcHm_v2.0_Chr4g0401521 Rosa chinensis HOM05D004914 ORTHO05D006512 9.8e-311 1069.7 699 78.0
Lalb_Chr05g0215361 Lupinus albus HOM05D004914 ORTHO05D006512 6.3e-310 1067.0 683 78.6
arahy.Tifrunner.gnm1.ann1.AE6EEZ Arachis hypogaea HOM05D004914 ORTHO05D006512 3.5e-308 1061.2 692 78.5
arahy.Tifrunner.gnm1.ann1.Q0IN0Q Arachis hypogaea HOM05D004914 ORTHO05D006512 3.5e-308 1061.2 692 78.5
RcHm_v2.0_Chr4g0401421 Rosa chinensis HOM05D004914 ORTHO05D006512 3.5e-308 1061.2 699 77.1
Gohir.D02G202952 Gossypium hirsutum HOM05D004914 ORTHO05D006512 5.9e-308 1060.4 695 77.6
CSS0023780 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.2e-306 1054.7 704 78.1
Aa31LG9G7630 Aethionema arabicum HOM05D004914 ORTHO05D006512 7.2e-306 1053.5 696 76.9
CARHR176690 Cardamine hirsuta HOM05D004914 ORTHO05D006512 2.7e-305 1051.6 697 76.3
Carub.0008s0273 Capsella rubella HOM05D004914 ORTHO05D006512 8.0e-305 1050.0 697 76.3
PSO717G0130 Papaver somniferum HOM05D004914 ORTHO05D006512 8.0e-305 1050.0 698 77.7
BcaB07g30888 Brassica carinata HOM05D004914 ORTHO05D006512 1.4e-304 1049.3 696 76.3
CDE12G0485 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 4.0e-304 1047.7 692 75.9
BcaC04g21765 Brassica carinata HOM05D004914 ORTHO05D006512 8.8e-304 1046.6 696 76.1
BolC9t55648H Brassica oleracea HOM05D004914 ORTHO05D006512 8.8e-304 1046.6 696 76.1
A02p29100 Brassica napus HOM05D004914 ORTHO05D006512 1.2e-303 1046.2 695 75.5
C09p27840 Brassica napus HOM05D004914 ORTHO05D006512 1.2e-303 1046.2 696 76.1
BraA09t37776Z Brassica rapa HOM05D004914 ORTHO05D006512 1.2e-303 1046.2 696 76.1
A09p21740 Brassica napus HOM05D004914 ORTHO05D006512 1.5e-303 1045.8 696 76.0
BraA02t07943Z Brassica rapa HOM05D004914 ORTHO05D006512 1.5e-303 1045.8 695 75.4
CsaV3_3G001000 Cucumis sativus L. HOM05D004914 ORTHO05D006512 2.0e-303 1045.4 698 75.2
MELO3C013790.2 Cucumis melo HOM05D004914 ORTHO05D006512 2.6e-303 1045.0 698 74.8
Sed0010004 Sechium edule HOM05D004914 ORTHO05D006512 2.6e-303 1045.0 705 74.8
DCAR_006313 Daucus carota HOM05D004914 ORTHO05D006512 4.4e-303 1044.3 702 76.5
Sp2g10330 Schrenkiella parvula HOM05D004914 ORTHO05D006512 1.3e-302 1042.7 696 75.4
BcaC03g16746 Brassica carinata HOM05D004914 ORTHO05D006512 3.7e-302 1041.2 695 75.4
BolC2t10674H Brassica oleracea HOM05D004914 ORTHO05D006512 3.7e-302 1041.2 695 75.4
AT5G45380 Arabidopsis thaliana HOM05D004914 ORTHO05D006512 1.1e-301 1039.6 697 75.2
C02p46180 Brassica napus HOM05D004914 ORTHO05D006512 1.1e-301 1039.6 695 75.3
BcaB07g30458 Brassica carinata HOM05D004914 ORTHO05D006512 1.4e-301 1039.3 696 75.1
QL12p001913 Quercus lobata HOM05D004914 ORTHO05D006512 9.1e-301 1036.6 699 75.8
Rhsim11G0034500 Rhododendron simsii HOM05D004914 ORTHO05D006512 9.1e-301 1036.6 701 76.9
Thhalv10000803m.g Eutrema salsugineum HOM05D004914 ORTHO05D006512 7.7e-300 1033.5 694 74.6
CSS0040630 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.2e-299 1031.9 727 74.0
Actinidia01258 Actinidia chinensis HOM05D004914 ORTHO05D006512 5.0e-299 1030.8 673 78.9
Eucgr.E01216 Eucalyptus grandis HOM05D004914 ORTHO05D006512 6.5e-299 1030.4 622 83.9
Pp3c1_21890 Physcomitrium patens HOM05D004914 ORTHO05D006512 6.5e-299 1030.4 713 73.1
ClCG10G000930 Citrullus lanatus HOM05D004914 ORTHO05D006512 1.9e-298 1028.9 697 74.7
vmacro00075 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 2.5e-298 1028.5 704 76.0
SMO134G0146 Selaginella moellendorffii HOM05D004914 ORTHO05D006512 4.2e-298 1027.7 664 78.8
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 1.8e-296 1022.3 659 79.1
Zm00001eb279810 Zea mays HOM05D004914 ORTHO05D006512 2.2e-294 1015.4 694 74.8
Os10g0580400 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D006512 5.4e-293 1010.7 691 74.8
Ca_25087_v3 Cicer arietinum L. HOM05D004914 ORTHO05D006512 2.3e-291 1005.4 616 81.7
Mapoly0022s0194 Marchantia polymorpha HOM05D004914 ORTHO05D006512 1.5e-290 1002.7 697 74.2
QL12p001923 Quercus lobata HOM05D004914 ORTHO05D006512 1.5e-290 1002.7 686 75.5
CAN.G1731.1 Capsicum annuum HOM05D004914 ORTHO05D006512 2.5e-290 1001.9 700 73.4
Migut.A00542 Erythranthe guttata HOM05D004914 ORTHO05D006512 1.5e-287 992.6 653 77.8
AL8G13420 Arabidopsis lyrata HOM05D004914 ORTHO05D006512 3.4e-287 991.5 697 72.3
FAN13G2505 Fragaria x ananassa HOM05D004914 ORTHO05D006512 5.7e-287 990.7 720 72.6
SGA_v2.0_scaffold96G29079 Striga asiatica HOM05D004914 ORTHO05D006512 2.9e-286 988.4 700 74.1
EL10Ac5g11909 Beta vulgaris HOM05D004914 ORTHO05D006512 8.3e-286 986.9 711 70.7
Pp3c14_7160 Physcomitrium patens HOM05D004914 ORTHO05D006512 2.8e-281 971.8 648 75.6
FAN04G0884 Fragaria x ananassa HOM05D004914 ORTHO05D006512 1.2e-276 956.4 689 73.0
unitig_92.g28131 Utricularia gibba HOM05D004914 ORTHO05D006512 6.6e-275 950.7 695 71.8
Gohir.A03G179800 Gossypium hirsutum HOM05D004914 ORTHO05D006512 1.8e-272 942.6 586 81.2
AUR62027313 Chenopodium quinoa HOM05D004914 ORTHO05D006512 3.2e-269 931.8 700 68.3
Nitab4.5_0016045g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 2.0e-263 912.5 541 84.8
CSS0001315 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 6.4e-262 907.5 725 67.3
FAN18G4324 Fragaria x ananassa HOM05D004914 ORTHO05D006512 1.1e-253 880.2 569 79.1
CDE01G0684 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 1.3e-241 840.1 696 63.4
vmacro00050 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 1.5e-239 833.2 722 63.4
AagrBONN_evm.TU.Sc2ySwM_344.881 Anthoceros agrestis HOM05D004914 ORTHO05D006512 4.5e-239 831.6 566 74.9
Lj8C331T9 Lonicera japonica HOM05D004914 ORTHO05D006512 1.6e-236 823.2 698 64.8
Mapoly0244s0005 Marchantia polymorpha HOM05D004914 ORTHO05D006512 8.7e-235 817.4 538 79.2
AUR62007419 Chenopodium quinoa HOM05D004914 ORTHO05D006512 1.1e-226 790.4 528 75.0
PGSC0003DMG401007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 2.2e-217 759.6 448 85.9
SEGI_28013 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 1.7e-209 733.4 396 94.7
SEGI_09515 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 3.1e-208 729.2 406 92.1
MCO16G134 Micromonas commoda HOM05D004914 ORTHO05D006512 1.3e-206 723.8 678 55.8
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 3.6e-196 689.1 618 57.8
COL.COLO4_37234 Corchorus olitorius HOM05D004914 ORTHO05D006512 8.2e-193 677.9 608 60.9
CSS0015562 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 4.1e-184 649.0 550 66.2
Cre08.g360200 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 1.7e-174 617.1 646 50.3
Cre17.g703800 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 1.2e-167 594.3 670 47.5
Cre08.g360250 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 5.0e-166 589.0 643 47.9
Nitab4.5_0011552g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 1.2e-164 584.3 517 62.5
SEGI_18257 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 6.8e-155 552.0 319 89.0
CSS0048600 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.4e-147 527.7 393 73.0
Mapoly0006s0303 Marchantia polymorpha HOM05D004914 ORTHO05D006512 3.2e-144 516.5 642 43.9
AagrBONN_evm.TU.Sc2ySwM_117.1801 Anthoceros agrestis HOM05D004914 ORTHO05D006512 5.1e-142 509.2 656 44.2
AagrBONN_evm.TU.Sc2ySwM_117.1769 Anthoceros agrestis HOM05D004914 ORTHO05D006512 9.9e-138 495.0 635 42.7
AagrBONN_evm.TU.Sc2ySwM_228.2050 Anthoceros agrestis HOM05D004914 ORTHO05D006512 4.6e-135 486.1 631 44.4
Oeu046798.1 Olea europaea HOM05D004914 ORTHO05D006512 6.2e-116 422.5 713 38.3
AagrBONN_evm.TU.Sc2ySwM_228.2053 Anthoceros agrestis HOM05D004914 ORTHO05D006512 9.0e-107 392.1 399 53.1
Mapoly0339s0001 Marchantia polymorpha HOM05D004914 ORTHO05D006512 2.5e-104 384.0 249 79.9
CSS0040069 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.0e-102 377.1 399 57.6
SEGI_16876 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 3.2e-80 303.9 228 72.8
PGSC0003DMG402007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 6.7e-78 296.2 213 68.1
FAN18G1875 Fragaria x ananassa HOM05D004914 ORTHO05D006512 4.9e-52 210.3 124 81.5
CSS0006727 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.4e-51 208.0 171 68.4
Mapoly1910s0001 Marchantia polymorpha HOM05D004914 ORTHO05D006512 4.9e-36 157.1 132 56.8
CSS0011428 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 6.8e-30 136.7 78 83.3
AagrBONN_evm.TU.Sc2ySwM_117.1738 Anthoceros agrestis HOM05D004914 ORTHO05D038447 7.1e-27 126.7 101 64.4
CBR_g12519 Chara braunii HOM05D004914 ORTHO05D006512 2.1e-23 115.2 92 59.8
arahy.Tifrunner.gnm1.ann1.N8W4DB Arachis hypogaea HOM05D004914 ORTHO05D000389 4.8e-23 114.0 63 79.4
arahy.Tifrunner.gnm1.ann1.3D8EL1 Arachis hypogaea HOM05D004914 ORTHO05D000389 2.6e-21 108.2 59 81.4
Os02g0689066 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D038447 3.1e-14 84.7 56 75.0
CSS0022246 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D112219 3.5e-10 71.2 55 61.8


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