Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 5.5e-53 210.7 106 100.0
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 7.5e-26 120.6 59 89.8
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 1.7e-25 119.4 61 85.2
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 3.7e-25 118.2 59 89.8
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 3.7e-25 118.2 60 88.3
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 4.9e-25 117.9 59 89.8
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 4.9e-25 117.9 59 88.1
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 6.4e-25 117.5 59 88.1
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 6.4e-25 117.5 59 88.1
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 8.3e-25 117.1 59 89.8
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 1.1e-24 116.7 59 88.1
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.1e-24 116.7 59 88.1
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 1.1e-24 116.7 59 88.1
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 1.1e-24 116.7 59 88.1
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 1.4e-24 116.3 59 84.7
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 1.9e-24 115.9 59 83.1
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 1.9e-24 115.9 59 88.1
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 1.9e-24 115.9 59 88.1
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 84.7
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 84.7
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 2.4e-24 115.5 59 86.4
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 3.2e-24 115.2 59 84.7
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 3.2e-24 115.2 59 83.1
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 3.2e-24 115.2 59 83.1
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 4.1e-24 114.8 58 84.5
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 4.1e-24 114.8 59 83.1
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 4.1e-24 114.8 59 86.4
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 4.1e-24 114.8 59 86.4
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 7.0e-24 114.0 59 84.7
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 7.0e-24 114.0 61 80.3
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 7.0e-24 114.0 59 86.4
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 9.2e-24 113.6 59 86.4
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 9.2e-24 113.6 59 83.1
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 9.2e-24 113.6 59 83.1
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 9.2e-24 113.6 59 83.1
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 1.2e-23 113.2 59 83.1
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 1.2e-23 113.2 59 81.4
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 1.2e-23 113.2 59 84.7
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 1.2e-23 113.2 56 89.3
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 1.2e-23 113.2 56 89.3
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 1.2e-23 113.2 59 84.7
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 1.2e-23 113.2 59 83.1
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 1.6e-23 112.8 56 89.3
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 1.6e-23 112.8 56 89.3
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 1.6e-23 112.8 59 83.1
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 1.6e-23 112.8 59 86.4
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 1.6e-23 112.8 59 83.1
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 2.0e-23 112.5 59 83.1
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 2.0e-23 112.5 59 83.1
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 2.0e-23 112.5 59 83.1
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 2.0e-23 112.5 56 89.3
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 2.0e-23 112.5 59 84.7
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 2.7e-23 112.1 59 84.7
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.7e-23 112.1 59 83.1
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 2.7e-23 112.1 59 83.1
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 2.7e-23 112.1 59 83.1
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 2.7e-23 112.1 60 83.3
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 2.7e-23 112.1 62 75.8
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 2.7e-23 112.1 59 81.4
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 2.7e-23 112.1 56 87.5
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 6.0e-23 110.9 59 81.4
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 6.0e-23 110.9 59 83.1
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 6.0e-23 110.9 59 83.1
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 6.0e-23 110.9 56 87.5
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 6.0e-23 110.9 59 83.1
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 6.0e-23 110.9 59 83.1
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 6.0e-23 110.9 59 83.1
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 7.8e-23 110.5 59 81.4
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 7.8e-23 110.5 56 85.7
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 7.8e-23 110.5 59 81.4
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 1.3e-22 109.8 59 81.4
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 1.3e-22 109.8 59 84.7
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 1.7e-22 109.4 59 81.4
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 3.9e-22 108.2 59 81.4
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 3.9e-22 108.2 59 81.4
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 6.6e-22 107.5 59 79.7
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 1.5e-21 106.3 59 78.0
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 1.5e-21 106.3 59 78.0
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 1.5e-21 106.3 59 78.0
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 1.5e-21 106.3 59 78.0
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 1.5e-21 106.3 59 78.0
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 2.5e-21 105.5 56 85.7
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.3e-21 105.1 57 84.2
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 3.6e-20 101.7 61 68.9
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 1.8e-19 99.4 61 70.5
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 1.5e-18 96.3 49 85.7
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 2.2e-17 92.4 71 59.2
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.7e-17 91.7 53 75.5
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 1.6e-15 86.3 60 66.7


User provided reference genes

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