Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38760 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 2.8e-291 1004.6 522 100.0
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 6.3e-134 481.9 311 78.8
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 1.8e-133 480.3 312 78.2
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 7.0e-133 478.4 311 78.5
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 4.5e-132 475.7 346 72.5
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.0e-131 474.6 318 76.1
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 5.0e-131 472.2 303 79.2
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 8.6e-131 471.5 312 77.9
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 1.5e-130 470.7 344 72.4
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 4.2e-130 469.2 312 77.2
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 4.2e-130 469.2 312 77.6
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 9.5e-130 468.0 312 76.6
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 9.5e-130 468.0 312 76.9
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 1.6e-129 467.2 312 76.9
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 1.6e-129 467.2 311 76.5
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 2.1e-129 466.8 312 76.9
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 2.1e-129 466.8 303 78.5
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 2.8e-129 466.5 316 75.3
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 2.8e-129 466.5 312 76.6
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 3.6e-129 466.1 325 75.1
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 3.6e-129 466.1 315 75.9
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 3.6e-129 466.1 312 76.9
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 4.7e-129 465.7 311 77.2
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 6.1e-129 465.3 312 76.0
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 6.1e-129 465.3 320 76.6
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 8.0e-129 464.9 353 70.0
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 1.0e-128 464.5 312 76.0
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 1.4e-128 464.2 312 75.3
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.8e-128 463.8 318 74.5
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 1.8e-128 463.8 302 78.1
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 2.3e-128 463.4 311 76.5
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 2.3e-128 463.4 311 76.5
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 2.3e-128 463.4 311 76.5
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 2.3e-128 463.4 311 76.5
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 3.0e-128 463.0 311 75.2
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 3.0e-128 463.0 312 75.6
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 4.0e-128 462.6 312 76.6
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 4.0e-128 462.6 354 70.3
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 5.2e-128 462.2 311 76.2
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 5.2e-128 462.2 312 76.3
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 6.8e-128 461.8 312 75.6
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 8.9e-128 461.5 312 76.0
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 8.9e-128 461.5 376 66.0
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 8.9e-128 461.5 312 75.6
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 1.2e-127 461.1 312 76.9
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 1.5e-127 460.7 332 72.3
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 2.6e-127 459.9 312 76.3
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 2.6e-127 459.9 312 74.4
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 3.4e-127 459.5 313 76.0
Cpa.g.sc82.47 Carica papaya HOM05D003653 ORTHO05D004249 4.4e-127 459.1 312 76.0
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 5.7e-127 458.8 312 75.6
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 7.5e-127 458.4 312 76.0
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 9.8e-127 458.0 312 74.7
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 2.2e-126 456.8 312 74.4
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 2.2e-126 456.8 315 74.9
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 2.2e-126 456.8 311 74.3
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 2.2e-126 456.8 312 74.7
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 2.8e-126 456.4 304 76.3
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 2.8e-126 456.4 304 76.3
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 3.7e-126 456.1 312 76.3
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 4.9e-126 455.7 313 74.8
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 6.3e-126 455.3 302 77.2
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 6.3e-126 455.3 312 74.4
Zm00001eb040740 Zea mays HOM05D003653 ORTHO05D004249 1.1e-125 454.5 306 73.9
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 1.4e-125 454.1 311 75.2
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 1.8e-125 453.8 312 74.4
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 1.8e-125 453.8 313 74.8
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.8e-125 453.8 312 74.7
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 2.4e-125 453.4 326 72.7
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 3.1e-125 453.0 314 74.8
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 4.1e-125 452.6 313 74.4
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 5.4e-125 452.2 305 75.7
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 5.4e-125 452.2 313 73.8
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 5.4e-125 452.2 312 74.4
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 5.4e-125 452.2 302 74.5
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 5.4e-125 452.2 314 74.5
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 5.4e-125 452.2 315 73.3
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 1.2e-124 451.1 314 74.8
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.0e-124 450.3 312 74.0
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 4.5e-124 449.1 303 76.6
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.3e-123 447.6 311 74.0
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 2.3e-123 446.8 314 74.2
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 2.3e-123 446.8 315 73.3
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 2.9e-123 446.4 314 73.9
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 6.6e-123 445.3 326 71.5
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 6.6e-123 445.3 302 74.8
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 1.1e-122 444.5 416 61.8
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.5e-122 444.1 311 73.3
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 1.9e-122 443.7 333 69.7
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 2.5e-122 443.4 312 73.4
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 1.6e-121 440.7 333 69.4
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.8e-121 439.9 311 72.7
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 3.6e-121 439.5 333 69.1
HPP92_012790 Vanilla planifolia HOM05D003653 ORTHO05D004249 1.0e-120 438.0 379 63.1
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 1.8e-120 437.2 363 65.0
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 4.0e-120 436.0 384 63.0
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 1.5e-119 434.1 308 73.1
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 2.9e-118 429.9 354 65.3
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 1.9e-117 427.2 333 68.5
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 7.0e-117 425.2 313 71.2
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 2.0e-116 423.7 292 74.3
PSO675G3146 Papaver somniferum HOM05D003653 ORTHO05D004249 2.7e-116 423.3 346 67.3
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 3.3e-114 416.4 311 70.4
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 2.8e-113 413.3 309 70.2
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 2.8e-113 413.3 309 70.2
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 1.8e-112 410.6 313 70.3
Pp3c14_9870 Physcomitrium patens HOM05D003653 ORTHO05D004249 2.3e-112 410.2 302 68.9
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 3.1e-112 409.8 311 69.5
BolC2t09153H Brassica oleracea HOM05D003653 ORTHO05D004249 3.4e-111 406.4 298 71.8
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 1.3e-110 404.4 302 70.9
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 3.7e-110 402.9 280 75.0
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 1.6e-108 397.5 312 66.7
AUR62025332 Chenopodium quinoa HOM05D003653 ORTHO05D004249 3.0e-107 393.3 312 66.7
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 5.1e-107 392.5 312 66.3
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 3.3e-106 389.8 349 63.3
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 7.3e-106 388.7 314 66.6
C02p31060 Brassica napus HOM05D003653 ORTHO05D004249 3.1e-104 383.3 314 66.6
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 1.5e-98 364.4 332 57.8
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 3.3e-98 363.2 428 50.9
CAN.G1364.1 Capsicum annuum HOM05D003653 ORTHO05D004249 5.6e-98 362.5 363 57.9
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 5.2e-96 355.9 313 64.2
ClCG08G005060 Citrullus lanatus HOM05D003653 ORTHO05D004249 9.9e-95 351.7 394 52.3
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 2.3e-83 313.9 311 57.9
Nitab4.5_0022446g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 5.1e-75 286.2 212 70.8
Lj6C103G5 Lonicera japonica HOM05D003653 ORTHO05D004249 2.5e-74 283.9 320 53.8
BcaNung06460 Brassica carinata HOM05D003653 ORTHO05D004249 1.5e-66 258.1 184 70.1
Cre03.g203750 Chlamydomonas reinhardtii HOM05D003653 ORTHO05D004249 5.7e-66 256.1 421 39.4
Haze_06172 Corylus avellana HOM05D003653 ORTHO05D004249 3.7e-57 226.9 346 43.4
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 3.8e-54 216.9 302 46.0
PRCOL_00003556 Prasinoderma coloniale HOM05D003653 ORTHO05D004249 3.0e-51 207.2 335 40.3
Lsat_1_v5_gn_2_26321 Lactuca sativa HOM05D003653 ORTHO05D004249 1.8e-40 171.4 117 77.8
Lsat_1_v5_gn_7_58641 Lactuca sativa HOM05D003653 ORTHO05D004249 4.1e-40 170.2 108 82.4
CAN.G4608.1 Capsicum annuum HOM05D003653 ORTHO05D004249 9.1e-40 169.1 132 67.4
Lsat_1_v5_gn_4_28660 Lactuca sativa HOM05D003653 ORTHO05D004249 1.5e-39 168.3 107 82.2
Lsat_1_v5_gn_7_30301 Lactuca sativa HOM05D003653 ORTHO05D004249 1.5e-39 168.3 109 80.7
Lsat_1_v5_gn_2_82101 Lactuca sativa HOM05D003653 ORTHO05D004249 1.7e-38 164.9 108 79.6
Solyc07g017520.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 8.5e-38 162.5 138 63.0
Lsat_1_v5_gn_5_93841 Lactuca sativa HOM05D003653 ORTHO05D004249 1.9e-37 161.4 117 74.4
TAR383G1054 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.2e-36 158.7 221 49.3
Lsat_1_v5_gn_2_18300 Lactuca sativa HOM05D003653 ORTHO05D004249 2.7e-36 157.5 102 83.3
CSS0010075 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 1.4e-32 145.2 134 65.7
Cfa023740 Carpinus fangiana HOM05D003653 ORTHO05D004249 1.9e-29 134.8 321 32.7
Gorai.004G136800 Gossypium raimondii HOM05D003653 ORTHO05D004249 5.0e-22 110.2 105 56.2
Gohir.D08G133700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 3.2e-21 107.5 105 55.2
SEGI_17180 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 5.5e-21 106.7 62 82.3
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.4e-19 102.1 54 90.7
SEGI_13281 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 1.7e-17 95.1 71 71.8
SEGI_18923 Sequoiadendron giganteum HOM05D000428 ORTHO05D015400 6.3e-17 93.2 57 78.9
Lsat_1_v5_gn_6_63001 Lactuca sativa HOM05D003653 ORTHO05D004249 3.1e-16 90.9 50 90.0
SEGI_39357 Sequoiadendron giganteum HOM05D003144 ORTHO05D003539 4.1e-16 90.5 56 78.6
SEGI_26630 Sequoiadendron giganteum HOM05D001017 ORTHO05D001025 1.3e-14 85.5 47 87.2
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.3e-14 84.7 53 79.2
CSS0022673 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 6.6e-14 83.2 49 75.5
SEGI_38688 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 1.1e-13 82.4 69 63.8
SEGI_10799 Sequoiadendron giganteum HOM05D000423 ORTHO05D000284 9.5e-13 79.3 52 75.0
SEGI_16832 Sequoiadendron giganteum HOM05D000832 ORTHO05D012435 9.5e-13 79.3 53 71.7
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 4.7e-12 77.0 52 75.0
SEGI_08747 Sequoiadendron giganteum HOM05D000573 ORTHO05D000425 6.1e-12 76.6 50 78.0
SEGI_39599 Sequoiadendron giganteum HOM05D000070 ORTHO05D000722 8.0e-12 76.3 50 78.0
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 1.8e-11 75.1 50 76.0
SEGI_28531 Sequoiadendron giganteum HOM05D000038 ORTHO05D015287 1.8e-11 75.1 62 66.1
SEGI_24028 Sequoiadendron giganteum HOM05D000015 ORTHO05D018161 3.0e-11 74.3 55 72.7
SEGI_00950 Sequoiadendron giganteum HOM05D001582 ORTHO05D004409 6.8e-11 73.2 46 80.4
SEGI_39847 Sequoiadendron giganteum HOM05D000094 ORTHO05D383741 1.2e-10 72.4 49 73.5
SEGI_00748 Sequoiadendron giganteum HOM05D000622 ORTHO05D000475 1.5e-10 72.0 50 72.0
SEGI_09160 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 1.5e-10 72.0 49 71.4
SEGI_19895 Sequoiadendron giganteum HOM05D003912 ORTHO05D004409 2.6e-10 71.2 50 74.0
SEGI_36222 Sequoiadendron giganteum HOM05D000077 ORTHO05D015307 2.6e-10 71.2 59 64.4
SEGI_11287 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 2.2e-09 68.2 48 72.9
Nitab4.5_0000055g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 2.9e-09 67.8 49 71.4
SEGI_05910 Sequoiadendron giganteum HOM05D000119 ORTHO05D000054 2.9e-09 67.8 42 81.0
SEGI_27904 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 2.9e-09 67.8 84 52.4
SEGI_13157 Sequoiadendron giganteum HOM05D000038 ORTHO05D000689 4.9e-09 67.0 46 69.6
SEGI_07037 Sequoiadendron giganteum HOM05D000059 ORTHO05D001838 1.1e-08 65.9 46 73.9
Haze_16165 Corylus avellana HOM05D003653 ORTHO05D004249 2.4e-08 64.7 167 32.3
SEGI_22870 Sequoiadendron giganteum HOM05D018424 ORTHO05D010051 5.4e-08 63.5 46 69.6
SEGI_00028 Sequoiadendron giganteum HOM05D000103 ORTHO05D000049 9.2e-08 62.8 71 50.7
SEGI_04603 Sequoiadendron giganteum HOM05D012064 ORTHO05D016544 1.2e-07 62.4 49 69.4
CSS0016412 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 5.9e-07 60.1 34 79.4
SEGI_31400 Sequoiadendron giganteum HOM05D000046 ORTHO05D000457 1.0e-06 59.3 45 62.2
RcHm_v2.0_Chr2g0096141 Rosa chinensis HOM05D003653 ORTHO05D004249 3.9e-06 57.4 31 80.6
Lsat_1_v5_gn_2_35921 Lactuca sativa HOM05D003653 ORTHO05D004249 5.0e-06 57.0 41 65.9


User provided reference genes

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