Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38743 Sequoiadendron giganteum HOM05D004169 ORTHO05D004942 1.5e-126 456.1 215 100.0
Ca_02057_v3 Cicer arietinum L. HOM05D004169 ORTHO05D004942 3.2e-100 368.6 212 76.9
Sabra02G0021500 Salix brachista HOM05D004169 ORTHO05D004942 5.1e-98 361.3 212 74.5
Medtr3g113160 Medicago truncatula HOM05D004169 ORTHO05D004942 8.8e-98 360.5 212 75.0
Glyma.04G026500 Glycine max HOM05D004169 ORTHO05D004942 3.3e-97 358.6 212 74.5
MBI05_g16274_MAGBIO Magnolia biondii HOM05D004169 ORTHO05D004942 4.3e-97 358.2 214 73.4
Nn5g29242 Nelumbo nucifera HOM05D004169 ORTHO05D004942 4.3e-97 358.2 212 73.6
Atru.chr13.351 Acer truncatum HOM05D004169 ORTHO05D004942 5.7e-97 357.8 212 75.0
PGR083G1299 Punica granatum HOM05D004169 ORTHO05D004942 7.4e-97 357.5 212 73.6
Hma1.2p1_1386F.1_g279800 Hydrangea macrophylla HOM05D004169 ORTHO05D004942 1.3e-96 356.7 212 75.0
Aqoxy6G02346 Aquilegia oxysepala HOM05D004169 ORTHO05D004942 2.2e-96 355.9 213 74.6
Ciclev10001334m.g Citrus clementina HOM05D004169 ORTHO05D004942 4.8e-96 354.8 212 73.1
FvH4_2g39100 Fragaria vesca HOM05D004169 ORTHO05D004942 4.8e-96 354.8 212 72.6
Lalb_Chr08g0246061 Lupinus albus HOM05D004169 ORTHO05D004942 4.8e-96 354.8 212 72.6
TPR.G30291 Trifolium pratense HOM05D004169 ORTHO05D004942 1.8e-95 352.8 212 73.6
Manes.18G017100 Manihot esculenta HOM05D004169 ORTHO05D004942 2.4e-95 352.4 211 73.9
CsaV3_2G029300 Cucumis sativus L. HOM05D004169 ORTHO05D004942 5.3e-95 351.3 211 73.5
ATR0149G003 Amborella trichopoda HOM05D004169 ORTHO05D004942 6.9e-95 350.9 212 75.0
AUR62014419 Chenopodium quinoa HOM05D004169 ORTHO05D004942 9.1e-95 350.5 212 74.1
MELO3C010990.2 Cucumis melo HOM05D004169 ORTHO05D004942 9.1e-95 350.5 209 73.7
VMungo1309G1829 Vigna mungo HOM05D004169 ORTHO05D004942 9.1e-95 350.5 212 74.5
Oeu047750.1 Olea europaea HOM05D004169 ORTHO05D004942 1.2e-94 350.1 211 73.9
GSVIVG01009830001 Vitis vinifera HOM05D004169 ORTHO05D004942 1.5e-94 349.7 212 72.2
Cpa.g.sc140.24 Carica papaya HOM05D004169 ORTHO05D004942 2.0e-94 349.4 211 73.9
Lj4C791T8 Lonicera japonica HOM05D004169 ORTHO05D004942 2.0e-94 349.4 212 71.7
FAN20G1955 Fragaria x ananassa HOM05D004169 ORTHO05D004942 2.6e-94 349.0 212 71.7
CANSAT35G1895 Cannabis sativa HOM05D004169 ORTHO05D004942 3.4e-94 348.6 211 74.4
Potri.002G027300 Populus trichocarpa HOM05D004169 ORTHO05D004942 3.4e-94 348.6 212 72.6
FAN15G3243 Fragaria x ananassa HOM05D004169 ORTHO05D004942 4.5e-94 348.2 212 71.7
MSTRG.1220 Avicennia marina HOM05D004169 ORTHO05D004942 5.9e-94 347.8 211 71.1
ClCG08G014480 Citrullus lanatus HOM05D004169 ORTHO05D004942 5.9e-94 347.8 211 72.5
Sc15g0002560 Simmondsia chinensis HOM05D004169 ORTHO05D004942 5.9e-94 347.8 212 74.5
TAR628G0735 Trochodendron aralioides HOM05D004169 ORTHO05D004942 7.7e-94 347.4 211 72.5
Lj1g0021833 Lotus japonicus HOM05D004169 ORTHO05D004942 1.0e-93 347.1 212 72.6
Os09g0520200 Oryza sativa ssp. japonica HOM05D004169 ORTHO05D004942 1.0e-93 347.1 213 72.8
Sed0010010 Sechium edule HOM05D004169 ORTHO05D004942 1.0e-93 347.1 211 72.0
Potri.005G235200 Populus trichocarpa HOM05D004169 ORTHO05D004942 1.3e-93 346.7 212 73.1
Prupe.1G370200 Prunus persica HOM05D004169 ORTHO05D004942 2.2e-93 345.9 212 73.1
Aa31sc185G60 Aethionema arabicum HOM05D004169 ORTHO05D004942 2.9e-93 345.5 205 74.1
RcHm_v2.0_Chr6g0302201 Rosa chinensis HOM05D004169 ORTHO05D004942 2.9e-93 345.5 212 71.7
Atru.chr13.350 Acer truncatum HOM05D004169 ORTHO05D004942 5.0e-93 344.7 212 72.6
CiPaw.07G153600 Carya illinoinensis HOM05D004169 ORTHO05D004942 5.0e-93 344.7 212 73.1
Migut.C00795 Erythranthe guttata HOM05D004169 ORTHO05D004942 5.0e-93 344.7 211 70.1
Ah.05g171900 Amaranthus hybridus HOM05D004169 ORTHO05D004942 1.1e-92 343.6 212 71.7
C07p53400 Brassica napus HOM05D004169 ORTHO05D004942 1.1e-92 343.6 214 72.0
BraA03t14568Z Brassica rapa HOM05D004169 ORTHO05D004942 1.1e-92 343.6 214 72.0
Cc10_g02050 Coffea canephora HOM05D004169 ORTHO05D004942 1.1e-92 343.6 212 70.8
QL02p010782 Quercus lobata HOM05D004169 ORTHO05D004942 1.1e-92 343.6 214 71.5
ECA232G2227 Erigeron canadensis HOM05D004169 ORTHO05D004942 1.4e-92 343.2 209 73.2
AL7G29130 Arabidopsis lyrata HOM05D004169 ORTHO05D004942 2.5e-92 342.4 212 71.2
A03p55080 Brassica napus HOM05D004169 ORTHO05D004942 2.5e-92 342.4 214 72.0
BolC7t45834H Brassica oleracea HOM05D004169 ORTHO05D004942 2.5e-92 342.4 214 71.5
BcaC09g50903 Brassica carinata HOM05D004169 ORTHO05D004942 3.2e-92 342.0 211 71.6
BcaNung01121 Brassica carinata HOM05D004169 ORTHO05D004942 3.2e-92 342.0 212 71.2
Cfa013911 Carpinus fangiana HOM05D004169 ORTHO05D004942 3.2e-92 342.0 212 72.6
A01p15480 Brassica napus HOM05D004169 ORTHO05D004942 4.2e-92 341.7 212 71.2
C01p19380 Brassica napus HOM05D004169 ORTHO05D004942 5.5e-92 341.3 211 71.6
BolC1t01866H Brassica oleracea HOM05D004169 ORTHO05D004942 5.5e-92 341.3 211 71.6
BraA01t01487Z Brassica rapa HOM05D004169 ORTHO05D004942 5.5e-92 341.3 211 71.6
CARHR231560 Cardamine hirsuta HOM05D004169 ORTHO05D004942 7.2e-92 340.9 213 71.4
Hma1.2p1_0773F.1_g216220 Hydrangea macrophylla HOM05D004169 ORTHO05D004942 9.4e-92 340.5 212 70.3
Hund26864 Selenicereus undatus HOM05D004169 ORTHO05D004942 1.6e-91 339.7 212 71.7
AUR62019155 Chenopodium quinoa HOM05D004169 ORTHO05D004942 2.1e-91 339.3 216 70.8
Sp7g22120 Schrenkiella parvula HOM05D004169 ORTHO05D004942 2.1e-91 339.3 212 71.2
Eucgr.F01623 Eucalyptus grandis HOM05D004169 ORTHO05D004942 2.7e-91 339.0 212 69.8
TWI12G0121 Tripterygium wilfordii HOM05D004169 ORTHO05D004942 2.7e-91 339.0 212 70.8
Thhalv10025308m.g Eutrema salsugineum HOM05D004169 ORTHO05D004942 4.7e-91 338.2 212 71.7
DCAR_013851 Daucus carota HOM05D004169 ORTHO05D004942 6.1e-91 337.8 212 69.8
AT4G24160 Arabidopsis thaliana HOM05D004169 ORTHO05D004942 1.0e-90 337.0 205 72.7
MD15G1016400 Malus domestica HOM05D004169 ORTHO05D004942 1.0e-90 337.0 212 72.2
EL10Ac1g00441 Beta vulgaris HOM05D004169 ORTHO05D004942 1.4e-90 336.7 211 71.6
HanXRQChr09g0269701 Helianthus annuus HOM05D004169 ORTHO05D004942 1.4e-90 336.7 211 72.0
Phvul.009G014600 Phaseolus vulgaris HOM05D004169 ORTHO05D004942 1.4e-90 336.7 209 71.8
TWI56G0721 Tripterygium wilfordii HOM05D004169 ORTHO05D004942 1.4e-90 336.7 212 69.8
Sabra05G0181500 Salix brachista HOM05D004169 ORTHO05D004942 2.3e-90 335.9 212 70.8
HPP92_014629 Vanilla planifolia HOM05D004169 ORTHO05D004942 2.3e-90 335.9 215 68.4
Dinv39491 Davidia involucrata HOM05D004169 ORTHO05D004942 3.0e-90 335.5 211 69.7
Duzib093G0775 Durio zibethinus HOM05D004169 ORTHO05D004942 3.0e-90 335.5 212 71.7
Peaxi162Scf00186g00012 Petunia axillaris HOM05D004169 ORTHO05D004942 3.9e-90 335.1 212 69.8
Sc26g0003230 Simmondsia chinensis HOM05D004169 ORTHO05D004942 3.9e-90 335.1 201 74.6
MD08G1017500 Malus domestica HOM05D004169 ORTHO05D004942 6.7e-90 334.3 212 72.2
Hund17227 Selenicereus undatus HOM05D004169 ORTHO05D004942 6.7e-90 334.3 212 71.7
TAR376G0386 Trochodendron aralioides HOM05D004169 ORTHO05D004942 6.7e-90 334.3 212 71.2
unitig_37.g13009 Utricularia gibba HOM05D004169 ORTHO05D004942 8.8e-90 334.0 211 69.2
Thecc.08G038200 Theobroma cacao HOM05D004169 ORTHO05D004942 1.1e-89 333.6 212 71.7
vmacro21702 Vaccinium macrocarpon HOM05D004169 ORTHO05D004942 1.1e-89 333.6 211 69.2
Carub.0007s1694 Capsella rubella HOM05D004169 ORTHO05D004942 1.5e-89 333.2 212 70.3
Dinv31815 Davidia involucrata HOM05D004169 ORTHO05D004942 2.0e-89 332.8 212 69.3
ECA246G0823 Erigeron canadensis HOM05D004169 ORTHO05D004942 4.4e-89 331.6 212 71.2
Nitab4.5_0000352g0020 Nicotiana tabacum HOM05D004169 ORTHO05D004942 4.4e-89 331.6 211 68.2
Lsat_1_v5_gn_5_26101 Lactuca sativa HOM05D004169 ORTHO05D004942 5.7e-89 331.3 211 71.1
Zm00001eb102970 Zea mays HOM05D004169 ORTHO05D004942 5.7e-89 331.3 212 68.9
CSS0042982 Camellia sinensis var. sinensis HOM05D004169 ORTHO05D004942 9.7e-89 330.5 212 67.0
CSS0046054 Camellia sinensis var. sinensis HOM05D004169 ORTHO05D004942 9.7e-89 330.5 212 67.0
Glyma.17G255400 Glycine max HOM05D004169 ORTHO05D004942 9.7e-89 330.5 212 70.3
Duzib116G0263 Durio zibethinus HOM05D004169 ORTHO05D004942 1.7e-88 329.7 212 70.8
Migut.N03135 Erythranthe guttata HOM05D004169 ORTHO05D004942 1.7e-88 329.7 211 68.7
arahy.Tifrunner.gnm1.ann1.T5GNGC Arachis hypogaea HOM05D004169 ORTHO05D004942 2.2e-88 329.3 212 70.3
Glyma.14G216800 Glycine max HOM05D004169 ORTHO05D004942 2.2e-88 329.3 212 70.3
Actinidia37978 Actinidia chinensis HOM05D004169 ORTHO05D004942 3.7e-88 328.6 211 69.2
Actinidia22490 Actinidia chinensis HOM05D004169 ORTHO05D004942 4.8e-88 328.2 211 68.7
Actinidia22492 Actinidia chinensis HOM05D004169 ORTHO05D004942 4.8e-88 328.2 211 68.7
arahy.Tifrunner.gnm1.ann1.SD0DCP Arachis hypogaea HOM05D004169 ORTHO05D004942 6.3e-88 327.8 212 69.8
Haze_22591 Corylus avellana HOM05D004169 ORTHO05D004942 6.3e-88 327.8 236 66.1
Ca_13394_v3 Cicer arietinum L. HOM05D004169 ORTHO05D004942 8.2e-88 327.4 212 69.3
HanXRQChr05g0156291 Helianthus annuus HOM05D004169 ORTHO05D004942 8.2e-88 327.4 212 69.8
SGA_v2.0_scaffold17G08098 Striga asiatica HOM05D004169 ORTHO05D004942 8.2e-88 327.4 220 66.4
THA.LOC104804855 Tarenaya hassleriana HOM05D004169 ORTHO05D004942 8.2e-88 327.4 211 70.1
THA.LOC104806900 Tarenaya hassleriana HOM05D004169 ORTHO05D004942 8.2e-88 327.4 214 70.1
PSO675G0784 Papaver somniferum HOM05D004169 ORTHO05D004942 1.4e-87 326.6 212 68.9
PSO541G3059 Papaver somniferum HOM05D004169 ORTHO05D004942 4.1e-87 325.1 212 68.4
Oeu030387.1 Olea europaea HOM05D004169 ORTHO05D004942 5.3e-87 324.7 211 67.3
Oeu030389.1 Olea europaea HOM05D004169 ORTHO05D004942 5.3e-87 324.7 211 67.3
Sopen07g015700 Solanum pennellii HOM05D004169 ORTHO05D004942 1.6e-86 323.2 211 65.9
vmacro04328 Vaccinium macrocarpon HOM05D004169 ORTHO05D004942 1.6e-86 323.2 211 66.8
Lsat_1_v5_gn_4_116000 Lactuca sativa HOM05D004169 ORTHO05D004942 2.0e-86 322.8 198 70.2
Medtr1g023340 Medicago truncatula HOM05D004169 ORTHO05D004942 2.0e-86 322.8 212 68.9
VMungo0647G1986 Vigna mungo HOM05D004169 ORTHO05D004942 2.0e-86 322.8 211 68.7
Phvul.001G009400 Phaseolus vulgaris HOM05D004169 ORTHO05D004942 2.6e-86 322.4 212 67.9
Psat6g005200 Pisum sativum HOM05D004169 ORTHO05D004942 2.6e-86 322.4 212 68.9
TPR.G34338 Trifolium pratense HOM05D004169 ORTHO05D004942 2.6e-86 322.4 212 68.9
MSTRG.24262 Avicennia marina HOM05D004169 ORTHO05D004942 4.5e-86 321.6 212 67.9
arahy.Tifrunner.gnm1.ann1.CMA0H9 Arachis hypogaea HOM05D004169 ORTHO05D004942 2.9e-85 318.9 249 61.0
Actinidia15392 Actinidia chinensis HOM05D004169 ORTHO05D004942 2.5e-84 315.8 211 65.9
Lalb_Chr22g0354451 Lupinus albus HOM05D004169 ORTHO05D004942 5.5e-84 314.7 212 67.5
CAN.G541.46 Capsicum annuum HOM05D004169 ORTHO05D004942 7.2e-84 314.3 211 66.4
arahy.Tifrunner.gnm1.ann1.3VK2QG Arachis hypogaea HOM05D004169 ORTHO05D004942 9.4e-84 313.9 262 58.0
Gohir.A05G188120 Gossypium hirsutum HOM05D004169 ORTHO05D004942 4.7e-83 311.6 212 67.9
Rhsim06G0026100 Rhododendron simsii HOM05D004169 ORTHO05D004942 1.4e-82 310.1 211 65.4
Gorai.009G196500 Gossypium raimondii HOM05D004169 ORTHO05D004942 2.3e-82 309.3 212 67.5
Lj5g0006972 Lotus japonicus HOM05D004169 ORTHO05D004942 6.7e-82 307.8 211 66.8
DCAR_009941 Daucus carota HOM05D004169 ORTHO05D004942 2.0e-81 306.2 235 60.4
unitig_8.g3381 Utricularia gibba HOM05D004169 ORTHO05D004942 2.0e-81 306.2 212 66.5
AagrBONN_evm.TU.Sc2ySwM_362.1142 Anthoceros agrestis HOM05D004169 ORTHO05D004942 1.7e-80 303.1 215 64.7
Nitab4.5_0004368g0020 Nicotiana tabacum HOM05D004169 ORTHO05D004942 2.8e-80 302.4 211 64.5
Rhsim07G0244700 Rhododendron simsii HOM05D004169 ORTHO05D004942 1.8e-79 299.7 257 55.6
SMO266G0010 Selaginella moellendorffii HOM05D004169 ORTHO05D004942 2.9e-77 292.4 198 66.2
Mapoly0037s0009 Marchantia polymorpha HOM05D004169 ORTHO05D004942 7.2e-76 287.7 214 61.7
Pp3c9_570 Physcomitrium patens HOM05D004169 ORTHO05D004942 3.6e-75 285.4 215 61.4
BcaNung06401 Brassica carinata HOM05D004169 ORTHO05D004942 6.8e-74 281.2 204 64.2
Solyc07g032180.3 Solanum lycopersicum HOM05D004169 ORTHO05D004942 8.8e-74 280.8 179 66.5
Glyma.06G026500 Glycine max HOM05D004169 ORTHO05D004942 4.1e-71 271.9 178 70.8
MD00G1162000 Malus domestica HOM05D004169 ORTHO05D004942 1.7e-69 266.5 212 62.7
CBR_g53937 Chara braunii HOM05D004169 ORTHO05D004942 1.5e-60 236.9 193 56.5
Psat5g014480 Pisum sativum HOM05D004169 ORTHO05D004942 7.3e-60 234.6 139 76.3
SalBow7G3670 Salvia bowleyana HOM05D004169 ORTHO05D004942 2.8e-59 232.6 131 78.6
Gorai.009G270900 Gossypium raimondii HOM05D004169 ORTHO05D004942 9.8e-57 224.2 244 47.5
COL.COLO4_26191 Corchorus olitorius HOM05D004169 ORTHO05D004942 1.1e-55 220.7 150 68.0
Gohir.D05G259151 Gossypium hirsutum HOM05D004169 ORTHO05D004942 5.4e-55 218.4 231 48.5
Sed0000348 Sechium edule HOM05D004169 ORTHO05D004942 3.5e-54 215.7 132 73.5
SGA_v2.0_scaffold92G28285 Striga asiatica HOM05D004169 ORTHO05D004942 3.3e-44 182.6 173 52.6
Cre01.g000300 Chlamydomonas reinhardtii HOM05D004169 ORTHO05D004942 1.4e-39 167.2 220 41.4
Gohir.D05G191200 Gossypium hirsutum HOM05D004169 ORTHO05D004942 1.6e-35 153.7 106 65.1
CARHR269140 Cardamine hirsuta HOM05D004169 ORTHO05D004942 8.9e-34 147.9 85 71.8
Lsat_1_v5_gn_9_64701 Lactuca sativa HOM05D004169 ORTHO05D004942 1.3e-21 107.5 74 60.8
PRCOL_00002006 Prasinoderma coloniale HOM05D004169 ORTHO05D004942 9.6e-20 101.3 202 30.2
TPR.G34370 Trifolium pratense HOM05D004169 ORTHO05D004942 1.8e-18 97.1 70 58.6
DCAR_009944 Daucus carota HOM05D004169 ORTHO05D004942 4.0e-18 95.9 62 59.7
Cfa027320 Carpinus fangiana HOM05D004169 ORTHO05D004942 3.4e-17 92.8 191 29.8
MCO08G266 Micromonas commoda HOM05D004169 ORTHO05D004942 3.8e-16 89.4 211 30.3
CARHR269150 Cardamine hirsuta HOM05D004169 ORTHO05D004942 1.8e-10 70.5 37 86.5


User provided reference genes

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