Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 0.0e+00 1150.2 664 100.0
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 4.1e-30 137.5 249 33.3
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 1.6e-29 135.6 262 36.6
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 7.7e-29 133.3 544 24.6
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 2.3e-28 131.7 240 35.8
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 6.5e-28 130.2 538 26.0
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 3.6e-26 124.4 177 40.1
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 1.0e-25 122.9 185 41.1
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.8e-25 122.1 190 38.9
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 1.8e-25 122.1 212 37.3
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 4.0e-25 120.9 253 34.4
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 8.9e-25 119.8 133 47.4
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 1.2e-24 119.4 173 39.3
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.2e-24 119.4 213 37.1
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.5e-24 119.0 133 49.6
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 1.5e-24 119.0 164 43.9
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.5e-24 119.0 248 34.7
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 2.0e-24 118.6 172 40.1
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 2.6e-24 118.2 238 35.3
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 3.4e-24 117.9 179 41.3
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 5.7e-24 117.1 191 36.6
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.3e-23 115.9 240 35.8
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 1.3e-23 115.9 179 38.5
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 1.7e-23 115.5 250 34.8
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.7e-23 115.5 179 39.7
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.8e-23 114.8 133 48.9
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 2.8e-23 114.8 248 34.3
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 3.7e-23 114.4 215 35.3
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 3.7e-23 114.4 169 37.9
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 4.9e-23 114.0 183 41.0
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 4.9e-23 114.0 172 39.0
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 8.3e-23 113.2 179 39.1
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 8.3e-23 113.2 201 35.3
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.1e-22 112.8 225 35.6
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.4e-22 112.5 538 24.2
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.4e-22 112.5 540 24.3
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 2.4e-22 111.7 196 39.8
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 2.4e-22 111.7 196 39.8
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 3.1e-22 111.3 240 32.9
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 4.1e-22 110.9 275 32.7
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 7.0e-22 110.2 259 30.9
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 9.2e-22 109.8 538 24.2
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 1.2e-21 109.4 143 43.4
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.6e-21 109.0 86 61.6
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 2.0e-21 108.6 174 42.5
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 2.0e-21 108.6 258 30.6
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 2.0e-21 108.6 279 32.6
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.7e-21 108.2 159 36.5
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 2.7e-21 108.2 228 32.5
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 5.9e-21 107.1 140 42.9
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 5.9e-21 107.1 133 42.1
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 5.9e-21 107.1 153 38.6
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 5.9e-21 107.1 142 44.4
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 7.8e-21 106.7 217 35.5
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.3e-20 105.9 213 35.7
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.3e-20 105.9 217 35.5
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 1.3e-20 105.9 228 32.0
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 1.7e-20 105.5 165 41.2
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 2.9e-20 104.8 267 31.8
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.9e-20 104.8 281 32.0
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 6.6e-20 103.6 133 38.3
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 6.6e-20 103.6 136 38.2
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 6.6e-20 103.6 217 35.0
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 7.3e-19 100.1 161 36.6
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 1.6e-18 99.0 66 68.2
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 2.1e-18 98.6 188 34.0
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 4.7e-18 97.4 263 28.9
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 1.4e-17 95.9 167 34.7
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 2.3e-17 95.1 133 43.6
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 3.0e-17 94.7 237 32.9
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 3.0e-17 94.7 69 65.2
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 5.2e-17 94.0 141 37.6
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 6.8e-17 93.6 248 30.6
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 2.0e-16 92.0 312 31.1
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 5.8e-16 90.5 171 34.5
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 5.8e-16 90.5 86 53.5
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 7.5e-16 90.1 67 61.2
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 1.3e-15 89.4 71 60.6
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 1.3e-15 89.4 74 58.1
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 1.7e-15 89.0 138 42.8
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 1.7e-15 89.0 61 67.2
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 3.7e-15 87.8 70 60.0
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.7e-15 87.8 62 71.0
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.7e-15 87.8 62 71.0
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 4.9e-15 87.4 234 31.2
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 8.3e-15 86.7 70 58.6
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 8.3e-15 86.7 70 58.6
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 1.4e-14 85.9 80 53.8
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 1.4e-14 85.9 70 58.6
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.8e-14 85.5 70 58.6
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.8e-14 85.5 70 58.6
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 1.8e-14 85.5 132 40.9
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 1.8e-14 85.5 70 58.6
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 3.2e-14 84.7 133 39.8
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 3.2e-14 84.7 133 39.8
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 5.0e-12 77.4 61 55.7
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 1.1e-11 76.3 110 44.5
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 9.5e-11 73.2 46 69.6
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 4.7e-10 70.9 205 28.3
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 6.2e-10 70.5 81 46.9


User provided reference genes

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