Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 4.5e-307 1057.4 640 100.0
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.2e-57 228.8 167 62.3
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.5e-57 228.4 167 62.3
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 1.8e-53 214.9 208 48.6
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 3.0e-53 214.2 158 57.6
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 3.0e-53 214.2 161 59.0
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.1e-52 212.2 157 59.2
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 1.5e-52 211.8 155 58.7
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 2.6e-52 211.1 184 52.2
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.3e-52 210.7 122 69.7
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 3.3e-52 210.7 161 57.1
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 9.7e-52 209.1 174 54.6
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 9.7e-52 209.1 164 54.3
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 1.3e-51 208.8 176 56.8
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 1.3e-51 208.8 156 56.4
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 1.3e-51 208.8 194 51.0
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.3e-51 208.8 177 55.4
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 2.2e-51 208.0 176 56.8
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 2.2e-51 208.0 142 62.0
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 2.8e-51 207.6 181 50.3
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 2.8e-51 207.6 127 69.3
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 2.8e-51 207.6 120 71.7
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 3.7e-51 207.2 195 50.3
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 3.7e-51 207.2 195 50.3
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 3.7e-51 207.2 177 55.4
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 3.7e-51 207.2 156 57.1
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 4.8e-51 206.8 148 61.5
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 6.3e-51 206.5 135 63.7
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 8.2e-51 206.1 194 51.5
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 8.2e-51 206.1 190 50.0
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 8.2e-51 206.1 152 59.2
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.1e-50 205.7 156 57.7
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.4e-50 205.3 182 51.1
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.4e-50 205.3 126 67.5
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 1.4e-50 205.3 135 63.0
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 1.4e-50 205.3 121 69.4
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.4e-50 205.3 172 55.2
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.8e-50 204.9 191 51.8
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.8e-50 204.9 121 69.4
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 1.8e-50 204.9 195 49.2
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 1.8e-50 204.9 184 52.2
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 1.8e-50 204.9 161 54.7
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 1.8e-50 204.9 126 65.9
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 2.4e-50 204.5 120 69.2
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 2.4e-50 204.5 248 42.3
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 2.4e-50 204.5 199 50.8
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 3.1e-50 204.1 127 66.9
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 4.1e-50 203.8 195 49.7
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 4.1e-50 203.8 126 64.3
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 5.3e-50 203.4 158 56.3
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 5.3e-50 203.4 181 50.3
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 5.3e-50 203.4 129 65.9
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 7.0e-50 203.0 133 63.9
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 9.1e-50 202.6 138 63.8
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 1.2e-49 202.2 146 61.0
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 1.2e-49 202.2 138 63.8
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 1.2e-49 202.2 138 63.8
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 1.6e-49 201.8 121 67.8
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.6e-49 201.8 153 57.5
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 1.6e-49 201.8 127 65.4
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 2.0e-49 201.4 121 68.6
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.0e-49 201.4 141 59.6
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.0e-49 201.4 141 59.6
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 2.0e-49 201.4 141 59.6
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.6e-49 201.1 128 65.6
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 3.5e-49 200.7 162 58.0
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 3.5e-49 200.7 159 56.0
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 3.5e-49 200.7 150 57.3
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 4.5e-49 200.3 132 64.4
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 5.9e-49 199.9 170 55.9
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 5.9e-49 199.9 120 66.7
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 5.9e-49 199.9 120 66.7
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 5.9e-49 199.9 120 67.5
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 7.7e-49 199.5 132 64.4
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.0e-48 199.1 121 67.8
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 1.0e-48 199.1 146 59.6
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 2.9e-48 197.6 161 53.4
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 2.9e-48 197.6 121 66.9
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.9e-48 197.6 121 66.1
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.9e-48 197.6 121 66.1
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 2.9e-48 197.6 160 56.2
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.8e-48 197.2 125 66.4
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 3.8e-48 197.2 129 60.5
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 5.0e-48 196.8 121 66.1
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 5.0e-48 196.8 175 51.4
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 6.5e-48 196.4 120 66.7
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 6.5e-48 196.4 129 64.3
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 8.5e-48 196.1 121 66.1
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 1.1e-47 195.7 121 63.6
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.1e-47 195.7 127 63.8
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.5e-47 195.3 143 62.9
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 1.9e-47 194.9 145 56.6
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 2.5e-47 194.5 143 62.9
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 3.2e-47 194.1 121 66.9
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 3.2e-47 194.1 121 65.3
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 2.7e-46 191.0 150 54.7
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 4.7e-46 190.3 170 52.4
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 4.7e-46 190.3 121 63.6
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 8.0e-46 189.5 121 65.3
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 8.0e-46 189.5 121 65.3
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 8.0e-46 189.5 121 65.3
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 1.0e-45 189.1 160 53.8
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 1.4e-45 188.7 121 64.5
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 1.8e-45 188.3 144 55.6
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 2.3e-45 188.0 106 71.7
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 3.0e-45 187.6 186 50.0
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 4.0e-45 187.2 138 58.7
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 2.6e-44 184.5 150 52.7
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 7.5e-44 183.0 181 50.3
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 9.7e-44 182.6 151 53.6
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.3e-43 182.2 134 57.5
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 1.0e-40 172.6 137 54.7
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 3.8e-40 170.6 153 51.0
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.0e-37 162.5 130 53.1
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.2e-36 159.1 135 52.6
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 7.5e-36 156.4 92 65.2
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 1.8e-29 135.2 101 55.4
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 5.4e-26 123.6 138 46.4
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.3e-24 118.2 79 63.3


User provided reference genes

Program Settings