Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 3.8e-47 191.0 89 100.0
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.7e-39 165.6 96 85.4
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.1e-22 109.8 85 58.8
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 9.4e-22 106.7 79 58.2
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 1.2e-21 106.3 75 60.0
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 2.7e-21 105.1 69 62.3
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 3.6e-21 104.8 81 58.0
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 3.6e-21 104.8 81 56.8
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 8.0e-21 103.6 82 53.7
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 1.0e-20 103.2 76 55.3
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.8e-20 102.4 81 56.8
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.8e-20 102.4 71 64.8
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.8e-20 102.4 84 56.0
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 1.8e-20 102.4 84 56.0
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 2.3e-20 102.1 72 58.3
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 2.3e-20 102.1 72 58.3
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 2.3e-20 102.1 66 63.6
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 2.3e-20 102.1 81 56.8
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 3.0e-20 101.7 72 58.3
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 4.0e-20 101.3 73 56.2
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 4.0e-20 101.3 73 56.2
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 5.2e-20 100.9 72 61.1
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 5.2e-20 100.9 67 64.2
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 5.2e-20 100.9 72 56.9
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 5.2e-20 100.9 77 58.4
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 6.8e-20 100.5 61 67.2
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 6.8e-20 100.5 66 62.1
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 6.8e-20 100.5 83 53.0
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 6.8e-20 100.5 77 61.0
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 8.8e-20 100.1 72 56.9
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 1.2e-19 99.8 72 56.9
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 1.2e-19 99.8 62 66.1
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 1.2e-19 99.8 74 56.8
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 1.2e-19 99.8 72 55.6
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.5e-19 99.4 84 54.8
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 1.5e-19 99.4 66 62.1
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 3.4e-19 98.2 75 56.0
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 3.4e-19 98.2 85 49.4
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 4.4e-19 97.8 62 64.5
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 4.4e-19 97.8 59 67.8
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 5.7e-19 97.4 85 49.4
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 5.7e-19 97.4 62 62.9
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 5.7e-19 97.4 83 51.8
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 7.5e-19 97.1 78 51.3
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 7.5e-19 97.1 72 56.9
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 7.5e-19 97.1 72 55.6
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 7.5e-19 97.1 81 51.9
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 1.3e-18 96.3 72 56.9
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 1.3e-18 96.3 82 51.2
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.3e-18 96.3 66 60.6
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.3e-18 96.3 85 47.1
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 1.7e-18 95.9 72 54.2
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 1.7e-18 95.9 103 43.7
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 2.2e-18 95.5 61 60.7
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 2.2e-18 95.5 65 58.5
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 2.2e-18 95.5 78 53.8
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 2.8e-18 95.1 72 55.6
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 2.8e-18 95.1 62 64.5
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 3.7e-18 94.7 66 56.1
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 3.7e-18 94.7 76 53.9
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 3.7e-18 94.7 61 62.3
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 3.7e-18 94.7 61 63.9
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 4.8e-18 94.4 62 59.7
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 4.8e-18 94.4 65 56.9
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 6.3e-18 94.0 68 58.8
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 6.3e-18 94.0 68 58.8
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 6.3e-18 94.0 61 62.3
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 8.3e-18 93.6 62 59.7
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 8.3e-18 93.6 66 57.6
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 1.1e-17 93.2 62 59.7
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 1.1e-17 93.2 60 60.0
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 1.4e-17 92.8 66 57.6
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 1.4e-17 92.8 73 50.7
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.4e-17 92.8 73 50.7
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 2.4e-17 92.0 64 59.4
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 2.4e-17 92.0 62 64.5
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 2.4e-17 92.0 79 50.6
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 2.4e-17 92.0 79 50.6
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 2.4e-17 92.0 66 54.5
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 2.4e-17 92.0 66 54.5
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 3.1e-17 91.7 59 61.0
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 5.4e-17 90.9 85 47.1
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 5.4e-17 90.9 62 62.9
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 5.4e-17 90.9 65 55.4
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 5.4e-17 90.9 54 66.7
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 7.0e-17 90.5 73 49.3
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 1.2e-16 89.7 61 59.0
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 1.2e-16 89.7 61 60.7
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 2.7e-16 88.6 80 47.5
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 4.5e-16 87.8 69 56.5
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 4.5e-16 87.8 69 56.5
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 1.0e-15 86.7 69 49.3
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 2.9e-15 85.1 62 53.2
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 5.0e-15 84.3 48 70.8
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 1.1e-14 83.2 50 68.0
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.5e-14 82.0 49 67.3
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.5e-14 82.0 49 67.3
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 3.3e-14 81.6 46 71.7
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 9.5e-14 80.1 48 64.6
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 8.0e-13 77.0 55 60.0
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 8.0e-13 77.0 62 56.5
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 1.0e-12 76.6 86 44.2
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 1.4e-12 76.3 61 45.9
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.5e-11 72.8 61 55.7
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 2.2e-10 68.9 65 44.6
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 3.7e-10 68.2 47 59.6
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 1.4e-09 66.2 46 56.5
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 2.5e-06 55.5 28 78.6
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 5.6e-06 54.3 28 75.0


User provided reference genes

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