Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 1.6e-91 339.7 216 100.0
SEGI_05341 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 1.3e-29 134.0 68 98.5
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 1.9e-15 87.0 138 42.0
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 2.1e-14 83.6 151 39.7
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 6.0e-14 82.0 149 36.9
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 1.8e-13 80.5 151 37.7
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 5.1e-13 79.0 132 38.6
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 8.7e-13 78.2 106 46.2
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 2.5e-12 76.6 133 41.4
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 3.3e-12 76.3 151 38.4
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 4.3e-12 75.9 129 36.4
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 5.7e-12 75.5 129 36.4
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 5.7e-12 75.5 104 44.2
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 5.7e-12 75.5 153 37.3
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 1.3e-11 74.3 146 38.4
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 1.6e-11 73.9 136 34.6
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 1.6e-11 73.9 98 46.9
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.1e-11 73.6 138 35.5
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.1e-11 73.6 138 35.5
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 2.1e-11 73.6 153 35.9
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 2.8e-11 73.2 148 39.9
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.7e-11 72.8 151 37.1
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 3.7e-11 72.8 141 38.3
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 4.8e-11 72.4 131 37.4
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 4.8e-11 72.4 135 35.6
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 6.3e-11 72.0 93 44.1
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 6.3e-11 72.0 147 37.4
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 6.3e-11 72.0 148 37.2
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 6.3e-11 72.0 148 35.1
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 8.2e-11 71.6 141 42.6
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 8.2e-11 71.6 129 34.9
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 8.2e-11 71.6 139 36.7
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.4e-10 70.9 135 34.8
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.8e-10 70.5 152 41.4
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 1.8e-10 70.5 130 37.7
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 1.8e-10 70.5 139 37.4
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 2.4e-10 70.1 149 41.6
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 2.4e-10 70.1 97 41.2
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 4.1e-10 69.3 147 36.1
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 4.1e-10 69.3 133 37.6
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 4.1e-10 69.3 130 37.7
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 5.3e-10 68.9 130 36.2
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 5.3e-10 68.9 85 44.7
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 5.3e-10 68.9 145 34.5
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 5.3e-10 68.9 103 44.7
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 9.0e-10 68.2 138 37.0
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 9.0e-10 68.2 150 38.7
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 1.2e-09 67.8 140 37.9
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.5e-09 67.4 142 37.3
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 1.5e-09 67.4 120 40.8
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 1.5e-09 67.4 130 36.9
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.5e-09 67.4 93 46.2
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.5e-09 67.4 93 46.2
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.5e-09 67.4 93 46.2
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 1.5e-09 67.4 152 36.2
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 2.0e-09 67.0 130 37.7
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 2.0e-09 67.0 140 35.0
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 3.4e-09 66.2 145 35.2
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 4.5e-09 65.9 155 33.5
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 4.5e-09 65.9 102 37.3
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 5.9e-09 65.5 137 35.8
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 5.9e-09 65.5 85 44.7
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 5.9e-09 65.5 151 31.8
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 7.6e-09 65.1 151 33.1
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 7.6e-09 65.1 85 42.4
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 7.6e-09 65.1 75 44.0
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 1.0e-08 64.7 146 40.4
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 1.0e-08 64.7 105 43.8
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 1.3e-08 64.3 133 36.8
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 1.3e-08 64.3 146 39.7
ATR0680G086 Amborella trichopoda HOM05D000509 ORTHO05D006393 1.7e-08 63.9 131 37.4
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 1.7e-08 63.9 91 39.6
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 2.2e-08 63.5 141 34.8
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 5.0e-08 62.4 138 37.0
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 8.5e-08 61.6 85 42.4
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 8.5e-08 61.6 130 36.9
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 1.1e-07 61.2 130 36.2
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 1.1e-07 61.2 109 37.6
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 1.4e-07 60.8 76 44.7
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 2.5e-07 60.1 139 39.6
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 3.2e-07 59.7 91 39.6
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 4.2e-07 59.3 82 37.8
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 4.2e-07 59.3 77 42.9
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 4.2e-07 59.3 85 38.8
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 1.6e-06 57.4 99 37.4
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 1.6e-06 57.4 99 36.4
Migut.B01755 Erythranthe guttata HOM05D000509 ORTHO05D006393 2.7e-06 56.6 133 35.3
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 2.7e-06 56.6 152 30.9
PSO782G0796 Papaver somniferum HOM05D000509 ORTHO05D006393 2.7e-06 56.6 83 36.1
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 2.7e-06 56.6 129 32.6
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 2.7e-06 56.6 131 35.9
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 3.6e-06 56.2 86 39.5
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 3.6e-06 56.2 138 31.2
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 4.6e-06 55.8 149 30.9
Pp3c7_5630 Physcomitrium patens HOM05D000509 ORTHO05D006393 4.6e-06 55.8 132 37.1
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 4.6e-06 55.8 129 34.1
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 4.6e-06 55.8 131 36.6
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 6.1e-06 55.5 85 37.6
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 6.1e-06 55.5 130 39.2
Peaxi162Scf00020g00322 Petunia axillaris HOM05D000509 ORTHO05D006393 6.1e-06 55.5 79 44.3
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 7.9e-06 55.1 147 34.0
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 7.9e-06 55.1 173 33.5


User provided reference genes

Program Settings