Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 0.0e+00 1282.7 685 100.0
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 1.9e-170 603.6 339 99.7
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 2.5e-138 496.9 689 47.5
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 1.5e-135 487.6 691 47.3
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 2.9e-134 483.4 691 45.6
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 1.0e-131 474.9 705 44.8
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 1.4e-128 464.5 689 46.7
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.4e-128 464.5 679 47.1
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.8e-128 464.2 695 46.0
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 3.1e-128 463.4 682 45.9
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 6.8e-128 462.2 688 45.3
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 1.5e-127 461.1 686 45.9
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 3.4e-127 459.9 703 45.5
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 1.7e-126 457.6 696 43.8
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.7e-126 457.6 684 45.6
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 3.7e-126 456.4 693 44.6
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 1.1e-125 454.9 677 44.8
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 2.4e-125 453.8 693 45.9
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 1.2e-124 451.4 728 43.5
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 3.5e-124 449.9 706 44.9
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 3.5e-124 449.9 692 42.5
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 4.6e-124 449.5 686 45.3
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 1.7e-123 447.6 679 41.5
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 6.6e-123 445.7 684 41.5
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 8.6e-123 445.3 694 45.1
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 4.3e-122 443.0 687 42.5
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 4.3e-122 443.0 694 44.4
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 4.3e-122 443.0 585 48.0
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 7.3e-122 442.2 695 43.6
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.2e-121 441.4 682 42.7
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 2.1e-121 440.7 690 44.9
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 4.7e-121 439.5 683 44.5
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 4.7e-121 439.5 696 43.5
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 8.1e-121 438.7 693 44.4
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 1.1e-120 438.3 691 44.6
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 2.3e-120 437.2 704 44.3
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 3.1e-120 436.8 640 44.8
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.2e-119 434.9 693 41.3
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 2.0e-119 434.1 700 43.4
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 2.6e-119 433.7 691 44.6
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 2.6e-119 433.7 693 43.9
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 2.6e-119 433.7 692 42.9
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 3.4e-119 433.3 689 43.5
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 4.4e-119 433.0 695 43.7
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 7.5e-119 432.2 581 47.8
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 9.9e-119 431.8 689 41.4
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.3e-118 431.4 672 45.5
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 1.7e-118 431.0 693 43.7
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 2.9e-118 430.3 676 44.7
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 3.7e-118 429.9 688 43.2
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 1.1e-117 428.3 686 42.3
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 1.9e-117 427.6 685 44.4
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 2.4e-117 427.2 693 45.5
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 7.1e-117 425.6 694 41.6
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 2.7e-116 423.7 692 42.9
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 2.7e-116 423.7 680 43.4
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 4.6e-116 422.9 693 42.9
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 6.0e-116 422.5 685 43.2
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.0e-115 421.8 696 43.8
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 3.0e-115 420.2 681 43.0
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 8.6e-115 418.7 703 42.4
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 1.9e-114 417.5 692 42.5
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 2.5e-114 417.2 687 42.5
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 2.5e-114 417.2 700 40.4
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 4.7e-113 412.9 712 44.0
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.4e-112 411.4 679 44.2
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 6.8e-112 409.1 728 45.2
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 2.0e-111 407.5 718 42.9
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 7.6e-111 405.6 681 44.2
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 6.4e-110 402.5 696 41.7
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 1.9e-109 401.0 681 42.4
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 2.4e-109 400.6 691 41.0
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 1.0e-107 395.2 717 41.6
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 1.5e-106 391.3 692 40.6
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 9.6e-106 388.7 661 41.3
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 2.4e-104 384.0 670 42.1
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 2.4e-104 384.0 530 45.3
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 5.8e-103 379.4 701 39.5
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 1.3e-102 378.3 692 38.7
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 3.8e-102 376.7 686 39.8
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 4.9e-102 376.3 664 43.1
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 6.4e-102 375.9 694 37.9
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 1.1e-98 365.2 532 44.2
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.3e-98 363.6 532 44.0
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 4.3e-98 363.2 554 42.2
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 2.8e-97 360.5 533 42.8
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 7.6e-95 352.4 544 42.1
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 1.7e-94 351.3 524 42.9
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 6.4e-94 349.4 524 42.7
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 2.4e-93 347.4 521 44.0
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 7.1e-93 345.9 589 43.1
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 1.2e-92 345.1 678 37.0
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 2.1e-92 344.4 533 40.9
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 2.7e-92 344.0 524 42.4
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 1.9e-90 337.8 521 42.2
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 4.3e-90 336.7 570 41.6
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 5.6e-90 336.3 521 41.3
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 4.6e-84 316.6 618 39.2
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 6.7e-83 312.8 525 41.1
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 6.7e-83 312.8 525 41.1
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 1.5e-82 311.6 523 40.5
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.1e-74 285.4 332 47.6
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 3.7e-73 280.4 392 44.1
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 2.6e-63 247.7 384 41.1
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 5.0e-62 243.4 535 35.7
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 3.5e-55 220.7 573 31.6
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.0e-43 181.0 229 47.6
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 5.7e-42 176.8 306 40.8
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 6.3e-41 173.3 232 44.8
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 2.4e-40 171.4 514 29.6
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 7.2e-29 133.3 597 26.8
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 1.2e-15 89.4 190 47.9
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 1.9e-13 82.0 166 35.5
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 8.3e-09 66.6 51 56.9


User provided reference genes

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