Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38426 Sequoiadendron giganteum HOM05D007553 ORTHO05D009123 3.7e-47 191.4 113 100.0
AL5G42060 Arabidopsis lyrata HOM05D007553 ORTHO05D009123 1.3e-07 60.1 67 53.7
BcaC07g40396 Brassica carinata HOM05D007553 ORTHO05D009123 1.7e-07 59.7 67 53.7
AT3G59900 Arabidopsis thaliana HOM05D007553 ORTHO05D009123 2.2e-07 59.3 67 50.7
Manes.01G009500 Manihot esculenta HOM05D007553 ORTHO05D009123 2.2e-07 59.3 62 54.8
BcaC08g45014 Brassica carinata HOM05D007553 ORTHO05D009123 2.9e-07 58.9 67 62.7
BolC6t37809H Brassica oleracea HOM05D007553 ORTHO05D009123 2.9e-07 58.9 67 62.7
BcaB02g07440 Brassica carinata HOM05D007553 ORTHO05D009123 3.7e-07 58.5 67 59.7
BraA07t30131Z Brassica rapa HOM05D007553 ORTHO05D009123 3.7e-07 58.5 67 61.2
Sc13g0008070 Simmondsia chinensis HOM05D007553 ORTHO05D009123 6.4e-07 57.8 65 52.3
CARHR170230 Cardamine hirsuta HOM05D007553 ORTHO05D009123 8.3e-07 57.4 67 52.2
A09p52250 Brassica napus HOM05D007553 ORTHO05D009123 1.1e-06 57.0 61 57.4
C06p26460 Brassica napus HOM05D007553 ORTHO05D009123 1.1e-06 57.0 67 52.2
BraA09t40654Z Brassica rapa HOM05D007553 ORTHO05D009123 1.1e-06 57.0 61 57.4
Carub.0005s2664 Capsella rubella HOM05D007553 ORTHO05D009123 1.1e-06 57.0 67 62.7
A07p24890 Brassica napus HOM05D007553 ORTHO05D009123 1.4e-06 56.6 67 49.3
BcaB01g03340 Brassica carinata HOM05D007553 ORTHO05D009123 3.2e-06 55.5 54 59.3
BcaB01g03341 Brassica carinata HOM05D007553 ORTHO05D009123 3.2e-06 55.5 54 59.3
BcaC07g40546 Brassica carinata HOM05D007553 ORTHO05D009123 3.2e-06 55.5 61 50.8
BolC8t51089H Brassica oleracea HOM05D007553 ORTHO05D009123 3.2e-06 55.5 61 50.8
BcaC01g05187 Brassica carinata HOM05D007553 ORTHO05D009123 4.1e-06 55.1 54 59.3
A03p24670 Brassica napus HOM05D007553 ORTHO05D009123 4.1e-06 55.1 54 59.3
C03p29410 Brassica napus HOM05D007553 ORTHO05D009123 4.1e-06 55.1 54 59.3
BolC3t15289H Brassica oleracea HOM05D007553 ORTHO05D009123 4.1e-06 55.1 54 59.3
Migut.N03014 Erythranthe guttata HOM05D007553 ORTHO05D009123 4.1e-06 55.1 58 58.6
THA.LOC104804341 Tarenaya hassleriana HOM05D007553 ORTHO05D009123 4.1e-06 55.1 54 57.4
THA.LOC104802351 Tarenaya hassleriana HOM05D007553 ORTHO05D009123 5.4e-06 54.7 69 49.3
Sc19g0002450 Simmondsia chinensis HOM05D007553 ORTHO05D009123 7.1e-06 54.3 57 50.9
AL4G42960 Arabidopsis lyrata HOM05D007553 ORTHO05D009123 9.2e-06 53.9 54 61.1
AT2G44080 Arabidopsis thaliana HOM05D007553 ORTHO05D009123 9.2e-06 53.9 54 61.1
CARHR139250 Cardamine hirsuta HOM05D007553 ORTHO05D009123 9.2e-06 53.9 54 61.1
TAR365G1148 Trochodendron aralioides HOM05D007553 ORTHO05D009123 9.2e-06 53.9 85 49.4


User provided reference genes

Program Settings