Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38416 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 2780.0 1392 100.0
SEGI_17338 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 1880.9 1077 89.0
SEGI_14650 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.0e-272 943.3 1454 41.4
SEGI_19179 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.7e-181 641.3 1530 32.9
SEGI_36560 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.2e-181 641.0 1382 33.9
SEGI_06175 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.2e-176 625.2 1373 33.7
SEGI_12606 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.0e-175 622.1 1525 31.9
SEGI_13951 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.4e-172 610.9 1277 34.0
SEGI_21161 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.5e-150 538.5 1334 31.7
SEGI_16158 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.4e-149 533.1 758 46.6
SEGI_03611 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.4e-135 488.8 1418 29.8
SEGI_41089 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.8e-135 488.4 1069 32.3
SEGI_19044 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 9.9e-126 456.1 1089 31.9
SEGI_28572 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.4e-125 453.4 1260 30.0
SEGI_11845 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.2e-116 424.5 1158 29.8
SEGI_28309 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 7.9e-115 419.9 1226 28.5
SEGI_20413 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.8e-112 411.4 1139 29.9
SEGI_11018 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 5.3e-111 407.1 1212 29.6
SEGI_14546 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.4e-110 404.4 1067 30.0
SEGI_28151 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.4e-108 399.1 708 35.3
SEGI_05804 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 7.1e-108 396.7 1154 29.3
SEGI_29838 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.1e-103 382.9 1086 30.0
SEGI_16474 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 9.0e-103 379.8 912 31.1
SEGI_23622 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.9e-100 372.1 1215 27.9
SEGI_34972 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.2e-100 371.3 514 41.1
SEGI_04171 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 7.2e-100 370.2 793 36.3
SEGI_39701 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.5e-97 361.7 1217 28.3
SEGI_08952 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.4e-95 355.1 1149 27.6
SEGI_03751 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 7.9e-91 340.1 979 28.9
SEGI_06464 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.0e-89 335.5 761 30.7
SEGI_27704 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 7.4e-89 333.6 737 33.5
SEGI_41445 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.8e-88 331.6 961 29.9
SEGI_16407 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.7e-88 331.3 745 31.3
SEGI_06130 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.7e-80 304.7 749 32.0
SEGI_28539 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 8.8e-74 283.5 1107 25.1
SEGI_28978 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 5.0e-61 241.1 550 33.3
SEGI_00368 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 5.7e-57 227.6 487 32.6
SEGI_02565 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 5.7e-57 227.6 487 32.6
SEGI_27891 Sequoiadendron giganteum HOM05D008033 ORTHO05D000004 1.1e-44 186.8 705 27.4
SEGI_00569 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.6e-41 175.6 108 75.9
SEGI_33726 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.6e-30 139.8 483 27.7
SEGI_41543 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 7.8e-30 137.5 432 29.4
SEGI_04805 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.7e-29 136.3 329 30.4
SEGI_27684 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.7e-29 136.3 329 30.4
SEGI_25935 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.0e-29 135.6 409 29.1
SEGI_38881 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.4e-26 126.7 200 39.0
SEGI_40392 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.8e-24 118.6 312 31.4
SEGI_01049 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.1e-23 117.1 425 29.9
SEGI_04657 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.9e-23 116.3 331 29.0
SEGI_30865 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.1e-20 107.1 378 27.0
SEGI_40658 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-19 103.2 201 36.8
SEGI_05380 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.0e-17 96.3 248 31.5
SEGI_41503 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.7e-16 93.2 121 41.3
SEGI_18707 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.4e-16 91.3 139 38.1
SEGI_37874 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.5e-14 85.5 101 43.6
SEGI_36134 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.3e-13 83.6 183 31.1
SEGI_23257 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 4.8e-11 75.1 270 27.4
SEGI_37766 Sequoiadendron giganteum HOM05D008033 ORTHO05D383897 6.9e-10 71.2 161 33.5
Cfa000149 Carpinus fangiana HOM05D000097 ORTHO05D000041 1.1e-07 63.9 133 30.8
SEGI_01193 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.1e-07 63.9 114 38.6
SEGI_14985 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.1e-07 63.9 114 38.6
Sed0015432 Sechium edule HOM05D000454 ORTHO05D000591 3.2e-07 62.4 117 37.6
SEGI_33068 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 4.2e-07 62.0 104 37.5
Hma1.2p1_0108F.1_g052110 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 7.1e-07 61.2 115 36.5
Manes.06G001000 Manihot esculenta HOM05D000264 ORTHO05D000152 7.1e-07 61.2 162 32.7
Manes.15G116900 Manihot esculenta HOM05D000097 ORTHO05D000041 7.1e-07 61.2 127 35.4
Lj4C905G2 Lonicera japonica HOM05D022195 ORTHO05D013569 1.6e-06 60.1 130 35.4
Haze_06873 Corylus avellana HOM05D000097 ORTHO05D000041 2.1e-06 59.7 136 28.7
Lj3A465G35 Lonicera japonica HOM05D000264 ORTHO05D000152 2.7e-06 59.3 86 39.5
CAN.G566.37 Capsicum annuum HOM05D000454 ORTHO05D000591 3.5e-06 58.9 115 35.7
Prupe.7G269500 Prunus persica HOM05D000454 ORTHO05D000591 3.5e-06 58.9 117 35.9
ECA247G3730 Erigeron canadensis HOM05D007464 ORTHO05D009388 4.6e-06 58.5 129 27.9
Ca_09570_v3 Cicer arietinum L. HOM05D000454 ORTHO05D000591 6.0e-06 58.2 112 35.7
Manes.06G001101 Manihot esculenta HOM05D000264 ORTHO05D000152 6.0e-06 58.2 162 31.5
CAN.G607.3 Capsicum annuum HOM05D000454 ORTHO05D000591 7.9e-06 57.8 118 32.2


User provided reference genes

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