Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 7.6e-55 216.9 104 100.0
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 3.4e-23 111.7 106 54.7
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 2.7e-20 102.1 101 57.4
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 3.5e-20 101.7 99 55.6
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 6.1e-20 100.9 100 55.0
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 6.1e-20 100.9 99 55.6
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 6.1e-20 100.9 100 54.0
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 7.9e-20 100.5 99 54.5
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 7.9e-20 100.5 97 56.7
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 1.0e-19 100.1 97 54.6
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 1.3e-19 99.8 99 56.6
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 1.8e-19 99.4 97 55.7
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 1.8e-19 99.4 99 55.6
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 2.3e-19 99.0 99 55.6
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 2.3e-19 99.0 95 55.8
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 3.9e-19 98.2 101 52.5
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 5.1e-19 97.8 97 54.6
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 5.1e-19 97.8 99 54.5
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 5.1e-19 97.8 99 54.5
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 6.7e-19 97.4 102 53.9
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 8.7e-19 97.1 102 53.9
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 8.7e-19 97.1 99 55.6
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.5e-18 96.3 99 53.5
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 1.9e-18 95.9 97 56.7
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.9e-18 95.9 99 53.5
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 2.5e-18 95.5 101 56.4
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 2.5e-18 95.5 99 53.5
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 2.5e-18 95.5 101 54.5
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 3.3e-18 95.1 98 54.1
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 4.3e-18 94.7 99 51.5
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 4.3e-18 94.7 100 56.0
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 4.3e-18 94.7 101 55.4
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 5.7e-18 94.4 102 55.9
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 5.7e-18 94.4 102 55.9
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 5.7e-18 94.4 102 55.9
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 5.7e-18 94.4 92 57.6
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 7.4e-18 94.0 102 53.9
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 7.4e-18 94.0 100 56.0
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 9.7e-18 93.6 96 55.2
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 9.7e-18 93.6 92 59.8
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 9.7e-18 93.6 93 57.0
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 1.3e-17 93.2 105 52.4
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 1.3e-17 93.2 102 53.9
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.8e-17 92.0 105 52.4
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 3.7e-17 91.7 97 52.6
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 3.7e-17 91.7 104 51.9
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 3.7e-17 91.7 106 51.9
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 4.8e-17 91.3 102 53.9
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 4.8e-17 91.3 97 53.6
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 6.3e-17 90.9 93 54.8
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 6.3e-17 90.9 97 52.6
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 6.3e-17 90.9 102 52.9
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 8.2e-17 90.5 102 53.9
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 8.2e-17 90.5 97 51.5
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 8.2e-17 90.5 106 51.9
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 8.2e-17 90.5 106 51.9
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.1e-16 90.1 93 54.8
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 1.1e-16 90.1 97 51.5
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.4e-16 89.7 100 53.0
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 1.4e-16 89.7 94 57.4
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.8e-16 89.4 107 51.4
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 2.4e-16 89.0 107 51.4
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 2.4e-16 89.0 104 51.0
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 2.4e-16 89.0 98 51.0
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 3.1e-16 88.6 107 51.4
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 4.1e-16 88.2 107 51.4
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 4.1e-16 88.2 100 51.0
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 5.3e-16 87.8 106 50.0
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 5.3e-16 87.8 101 52.5
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 6.9e-16 87.4 103 50.5
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 1.2e-15 86.7 87 52.9
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.5e-15 86.3 100 52.0
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 2.0e-15 85.9 100 52.0
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 3.4e-15 85.1 100 48.0
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 3.4e-15 85.1 106 49.1
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 4.5e-15 84.7 102 49.0
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 5.9e-15 84.3 97 53.6
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 5.9e-15 84.3 101 50.5
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 7.7e-15 84.0 98 46.9
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 1.0e-14 83.6 101 49.5
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 1.7e-14 82.8 89 52.8
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 8.5e-14 80.5 100 47.0
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.9e-13 79.3 100 49.0
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 2.5e-13 79.0 88 53.4
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 3.2e-13 78.6 106 49.1
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 3.2e-13 78.6 106 49.1
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 7.2e-13 77.4 101 47.5
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 7.2e-13 77.4 104 47.1
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 7.2e-13 77.4 102 50.0
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 9.4e-13 77.0 113 45.1
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 1.2e-12 76.6 104 46.2
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.4e-11 73.2 83 51.8
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 7.4e-10 67.4 112 41.1
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 9.7e-10 67.0 90 47.8
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.1e-08 63.5 86 46.5
SEGI_05572 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 9.1e-08 60.5 75 41.3
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 3.4e-07 58.5 70 50.0
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.0e-06 57.0 79 46.8
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 2.2e-06 55.8 106 39.6
Mapoly0047s0010 Marchantia polymorpha HOM05D026638 ORTHO05D030127 3.8e-06 55.1 119 33.6
AagrBONN_evm.TU.Sc2ySwM_228.5007 Anthoceros agrestis HOM05D007473 ORTHO05D070065 8.5e-06 53.9 41 53.7


User provided reference genes

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