Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 4.0e-114 414.8 217 100.0
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 1.8e-34 150.2 160 48.8
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 6.9e-34 148.3 187 46.5
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 1.2e-33 147.5 165 51.5
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 1.5e-33 147.1 133 57.9
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.6e-33 146.4 197 45.7
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 3.4e-33 146.0 132 59.8
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 5.8e-33 145.2 156 50.0
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 5.8e-33 145.2 132 58.3
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 5.8e-33 145.2 167 48.5
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 1.3e-32 144.1 153 52.9
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 2.9e-32 142.9 159 50.9
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 2.9e-32 142.9 159 50.9
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 2.9e-32 142.9 148 52.7
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 3.8e-32 142.5 132 56.8
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 3.8e-32 142.5 161 50.3
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 3.8e-32 142.5 189 45.0
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 4.9e-32 142.1 159 50.9
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 4.9e-32 142.1 157 51.6
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 6.5e-32 141.7 151 57.0
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 1.1e-31 141.0 159 50.3
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 1.1e-31 141.0 151 51.7
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.1e-31 141.0 132 56.8
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 1.4e-31 140.6 131 57.3
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 1.4e-31 140.6 131 55.7
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 1.4e-31 140.6 130 57.7
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.4e-31 140.6 198 44.9
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.9e-31 140.2 158 48.1
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 1.9e-31 140.2 135 55.6
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.9e-31 140.2 153 49.7
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.5e-31 139.8 159 50.3
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 2.5e-31 139.8 154 50.6
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 2.5e-31 139.8 131 56.5
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 3.2e-31 139.4 130 57.7
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 3.2e-31 139.4 131 57.3
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 3.2e-31 139.4 146 53.4
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 3.2e-31 139.4 144 52.8
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 3.2e-31 139.4 177 46.9
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 3.2e-31 139.4 133 53.4
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 3.2e-31 139.4 163 48.5
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 4.2e-31 139.0 160 51.2
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 4.2e-31 139.0 147 51.0
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 4.2e-31 139.0 132 55.3
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 7.1e-31 138.3 207 44.4
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 9.3e-31 137.9 188 41.5
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 1.2e-30 137.5 130 56.2
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 1.2e-30 137.5 129 54.3
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 1.6e-30 137.1 186 46.8
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 1.6e-30 137.1 131 53.4
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 2.1e-30 136.7 158 49.4
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 2.7e-30 136.3 117 58.1
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 2.7e-30 136.3 160 46.9
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 2.7e-30 136.3 155 49.0
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 3.5e-30 136.0 158 49.4
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 3.5e-30 136.0 129 54.3
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 6.0e-30 135.2 186 45.7
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.0e-30 135.2 132 51.5
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 6.0e-30 135.2 134 51.5
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 6.0e-30 135.2 132 54.5
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 7.9e-30 134.8 132 54.5
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 1.0e-29 134.4 192 42.7
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.3e-29 134.0 158 49.4
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.3e-29 134.0 158 49.4
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.8e-29 133.7 202 40.6
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.8e-29 133.7 145 51.0
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.3e-29 133.3 202 40.6
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 2.3e-29 133.3 203 43.3
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 3.0e-29 132.9 167 46.7
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 3.9e-29 132.5 188 44.1
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 3.9e-29 132.5 194 42.3
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 5.1e-29 132.1 168 46.4
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 8.7e-29 131.3 112 61.6
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.1e-28 131.0 185 43.8
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.1e-28 131.0 185 43.8
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.9e-28 130.2 122 53.3
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.9e-28 130.2 161 47.8
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.5e-28 129.8 160 46.2
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 3.3e-28 129.4 135 51.9
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 4.3e-28 129.0 151 48.3
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 5.7e-28 128.6 132 49.2
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 5.7e-28 128.6 167 45.5
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 2.1e-27 126.7 167 42.5
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 6.3e-27 125.2 160 45.6
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 8.2e-27 124.8 133 51.1
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 8.2e-27 124.8 191 40.8
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 1.4e-26 124.0 87 63.2
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.8e-26 123.6 147 46.3
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 1.8e-26 123.6 89 61.8
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 4.1e-26 122.5 130 50.0
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 4.1e-26 122.5 154 48.1
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 2.0e-25 120.2 213 39.9
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 2.0e-25 120.2 179 44.7
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 4.5e-25 119.0 143 49.0
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 1.3e-24 117.5 117 57.3
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 1.3e-24 117.5 110 53.6
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 5.0e-24 115.5 87 59.8
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 8.5e-24 114.8 88 56.8
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 3.2e-23 112.8 89 56.2
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 9.3e-23 111.3 124 48.4
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 1.1e-20 104.4 73 67.1
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.5e-20 104.0 200 38.5
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 5.0e-16 89.0 111 46.8
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 3.3e-12 76.3 125 42.4
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 1.4e-10 70.9 111 40.5
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 9.1e-10 68.2 111 38.7
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.4e-07 60.8 97 42.3
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 1.2e-06 57.8 78 47.4


User provided reference genes

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