Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 2.7e-48 194.9 91 100.0
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 3.5e-24 114.8 84 65.5
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 3.3e-22 108.2 66 72.7
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 7.4e-22 107.1 67 68.7
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 7.4e-22 107.1 67 68.7
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 1.6e-21 105.9 64 71.9
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 2.8e-21 105.1 74 62.2
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 3.7e-21 104.8 82 58.5
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 4.8e-21 104.4 66 65.2
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 6.3e-21 104.0 66 69.7
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 8.2e-21 103.6 67 65.7
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 8.2e-21 103.6 64 70.3
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 1.1e-20 103.2 74 67.6
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 1.4e-20 102.8 64 68.8
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 1.8e-20 102.4 67 67.2
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 1.8e-20 102.4 67 67.2
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 1.8e-20 102.4 74 62.2
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 1.8e-20 102.4 64 70.3
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 1.8e-20 102.4 64 70.3
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 1.8e-20 102.4 67 64.2
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.8e-20 102.4 66 68.2
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.4e-20 102.1 66 65.2
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 2.4e-20 102.1 74 62.2
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 2.4e-20 102.1 64 68.8
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 3.1e-20 101.7 66 65.2
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 3.1e-20 101.7 62 71.0
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 4.1e-20 101.3 64 68.8
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 4.1e-20 101.3 64 68.8
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 4.1e-20 101.3 64 68.8
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 4.1e-20 101.3 62 67.7
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 5.3e-20 100.9 78 61.5
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 5.3e-20 100.9 78 61.5
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 5.3e-20 100.9 78 61.5
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 5.3e-20 100.9 67 65.7
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 5.3e-20 100.9 74 59.5
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 5.3e-20 100.9 74 59.5
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 5.3e-20 100.9 74 59.5
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 6.9e-20 100.5 75 57.3
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.9e-20 100.5 73 60.3
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 9.0e-20 100.1 67 64.2
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 9.0e-20 100.1 74 56.8
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 9.0e-20 100.1 64 67.2
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 9.0e-20 100.1 64 68.8
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 1.5e-19 99.4 66 63.6
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 1.5e-19 99.4 64 65.6
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 1.5e-19 99.4 64 68.8
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.5e-19 99.4 73 58.9
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 1.5e-19 99.4 74 58.1
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 2.0e-19 99.0 64 67.2
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 2.0e-19 99.0 74 60.8
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 2.0e-19 99.0 64 67.2
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 2.6e-19 98.6 65 61.5
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 2.6e-19 98.6 74 59.5
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 2.6e-19 98.6 79 54.4
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 3.4e-19 98.2 66 63.6
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 3.4e-19 98.2 64 65.6
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 3.4e-19 98.2 66 62.1
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 3.4e-19 98.2 64 65.6
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 3.4e-19 98.2 66 62.1
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 5.9e-19 97.4 66 62.1
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 7.6e-19 97.1 62 67.7
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 7.6e-19 97.1 74 59.5
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 7.6e-19 97.1 65 63.1
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 7.6e-19 97.1 74 59.5
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 7.6e-19 97.1 74 60.8
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.0e-18 96.7 66 63.6
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 1.0e-18 96.7 64 65.6
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.0e-18 96.7 59 67.8
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 1.0e-18 96.7 74 59.5
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 1.0e-18 96.7 64 67.2
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 1.3e-18 96.3 63 66.7
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 1.3e-18 96.3 64 67.2
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 1.3e-18 96.3 63 65.1
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 2.2e-18 95.5 63 66.7
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.2e-18 95.5 74 58.1
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 2.2e-18 95.5 74 59.5
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 2.2e-18 95.5 64 65.6
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 2.9e-18 95.1 64 62.5
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 5.0e-18 94.4 64 62.5
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 5.0e-18 94.4 74 59.5
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 5.0e-18 94.4 62 67.7
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.0e-18 94.4 64 62.5
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 6.5e-18 94.0 64 64.1
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 6.5e-18 94.0 64 62.5
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 6.5e-18 94.0 64 62.5
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 8.5e-18 93.6 64 60.9
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 1.1e-17 93.2 75 54.7
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 1.1e-17 93.2 64 60.9
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.1e-17 93.2 64 62.5
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.1e-17 93.2 64 62.5
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 1.1e-17 93.2 64 62.5
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 1.4e-17 92.8 74 58.1
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 1.9e-17 92.4 75 54.7
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.9e-17 92.4 64 62.5
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 1.9e-17 92.4 74 56.8
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.9e-17 92.4 74 56.8
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 1.9e-17 92.4 74 56.8
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 2.5e-17 92.0 75 54.7
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 2.5e-17 92.0 64 59.4
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 2.5e-17 92.0 85 51.8
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 3.2e-17 91.7 74 56.8
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 3.2e-17 91.7 74 55.4
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 3.2e-17 91.7 64 59.4
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 4.2e-17 91.3 62 62.9
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 4.2e-17 91.3 74 55.4
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 5.5e-17 90.9 74 55.4
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 7.2e-17 90.5 63 61.9
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.2e-16 89.7 96 47.9
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 1.2e-16 89.7 64 57.8
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.6e-16 89.4 67 58.2
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 1.6e-16 89.4 65 60.0
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 2.1e-16 89.0 75 53.3
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.0e-15 85.1 53 66.0
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 3.9e-15 84.7 67 52.2
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 3.9e-15 84.7 64 54.7
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 2.5e-14 82.0 58 62.1
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 9.7e-14 80.1 86 45.3
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.7e-13 79.3 68 54.4
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 4.8e-13 77.8 59 55.9
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.2e-13 77.0 49 61.2
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 1.4e-12 76.3 47 70.2
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 7.7e-11 70.5 49 57.1
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 1.7e-10 69.3 48 62.5
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 2.5e-09 65.5 41 70.7
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.0e-07 58.5 39 61.5
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 6.7e-07 57.4 59 52.5
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 8.8e-07 57.0 35 65.7
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 2.6e-06 55.5 34 67.6


User provided reference genes

Program Settings