Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38081 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 9.9e-56 219.9 115 100.0
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 8.2e-10 67.4 60 53.3
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 4.1e-09 65.1 61 49.2
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 4.1e-09 65.1 61 49.2
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 4.1e-09 65.1 61 49.2
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 4.1e-09 65.1 61 49.2
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 5.3e-09 64.7 59 59.3
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 6.9e-09 64.3 55 58.2
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 3.4e-08 62.0 63 52.4
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 3.4e-08 62.0 55 56.4
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 5.9e-08 61.2 61 49.2
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 7.7e-08 60.8 60 51.7
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 7.7e-08 60.8 61 45.9
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 1.3e-07 60.1 61 47.5
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 1.3e-07 60.1 61 44.3
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 1.3e-07 60.1 46 56.5
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 1.7e-07 59.7 44 54.5
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 2.9e-07 58.9 44 56.8
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 3.8e-07 58.5 63 42.9
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 5.0e-07 58.2 54 53.7
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 6.5e-07 57.8 56 50.0
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 6.5e-07 57.8 59 50.8
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 8.5e-07 57.4 63 50.8
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 8.5e-07 57.4 60 48.3
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 1.4e-06 56.6 56 48.2
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 1.9e-06 56.2 60 48.3
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 2.5e-06 55.8 44 56.8
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 2.5e-06 55.8 60 48.3
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 3.2e-06 55.5 60 45.0
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 4.2e-06 55.1 44 54.5
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 4.2e-06 55.1 46 52.2
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 4.2e-06 55.1 44 52.3
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 5.5e-06 54.7 63 49.2
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 5.5e-06 54.7 62 45.2
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 7.2e-06 54.3 43 55.8
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 7.2e-06 54.3 55 47.3
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 7.2e-06 54.3 50 50.0
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 7.2e-06 54.3 59 44.1
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 9.4e-06 53.9 47 51.1
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 9.4e-06 53.9 58 43.1
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 9.4e-06 53.9 50 48.0
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 9.4e-06 53.9 44 54.5


User provided reference genes

Program Settings