Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38048 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 4.6e-100 367.9 181 100.0
PSO541G4668 Papaver somniferum HOM05D006825 ORTHO05D008510 1.3e-41 173.7 163 55.8
MBI02_g07022_MAGBIO Magnolia biondii HOM05D006825 ORTHO05D008510 8.3e-41 171.0 165 55.8
Potri.007G056800 Populus trichocarpa HOM05D006825 ORTHO05D008510 3.9e-38 162.2 161 50.9
Nitab4.5_0004340g0050 Nicotiana tabacum HOM05D006825 ORTHO05D008510 6.6e-38 161.4 163 50.9
Lsat_1_v5_gn_4_145960 Lactuca sativa HOM05D006825 ORTHO05D008510 2.5e-37 159.5 161 50.3
Sabra07G0048700 Salix brachista HOM05D006825 ORTHO05D008510 2.5e-37 159.5 161 52.2
PGSC0003DMG400022529 Solanum tuberosum HOM05D006825 ORTHO05D008510 2.5e-37 159.5 161 50.9
ECA232G1215 Erigeron canadensis HOM05D006825 ORTHO05D008510 4.3e-37 158.7 161 49.1
EL10Ac6g15487 Beta vulgaris HOM05D006825 ORTHO05D008510 7.3e-37 157.9 161 48.4
Cc07_g10910 Coffea canephora HOM05D006825 ORTHO05D008510 7.3e-37 157.9 165 49.7
CAN.G1817.4 Capsicum annuum HOM05D006825 ORTHO05D008510 1.2e-36 157.1 161 50.9
Nn3g20374 Nelumbo nucifera HOM05D006825 ORTHO05D008510 1.2e-36 157.1 161 52.8
ATR1098G103 Amborella trichopoda HOM05D006825 ORTHO05D008510 1.6e-36 156.8 166 51.8
CSS0030622 Camellia sinensis var. sinensis HOM05D006825 ORTHO05D008510 2.1e-36 156.4 164 50.6
CSS0032071 Camellia sinensis var. sinensis HOM05D006825 ORTHO05D008510 2.1e-36 156.4 164 50.6
Solyc03g033450.4 Solanum lycopersicum HOM05D006825 ORTHO05D008510 4.7e-36 155.2 161 50.9
Gohir.D03G008700 Gossypium hirsutum HOM05D006825 ORTHO05D008510 6.1e-36 154.8 162 47.5
Gorai.003G008900 Gossypium raimondii HOM05D006825 ORTHO05D008510 6.1e-36 154.8 162 47.5
Oeu053236.1 Olea europaea HOM05D006825 ORTHO05D008510 6.1e-36 154.8 161 49.1
Os02g0320100 Oryza sativa ssp. japonica HOM05D006825 ORTHO05D008510 6.1e-36 154.8 161 50.9
Actinidia17432 Actinidia chinensis HOM05D006825 ORTHO05D008510 8.0e-36 154.5 161 50.3
Gohir.A02G171400 Gossypium hirsutum HOM05D006825 ORTHO05D008510 8.0e-36 154.5 162 47.5
Manes.01G148100 Manihot esculenta HOM05D006825 ORTHO05D008510 8.0e-36 154.5 163 52.1
AUR62029480 Chenopodium quinoa HOM05D006825 ORTHO05D008510 1.0e-35 154.1 161 49.1
DCAR_021509 Daucus carota HOM05D006825 ORTHO05D008510 1.0e-35 154.1 161 50.3
Lj4A220T100 Lonicera japonica HOM05D006825 ORTHO05D008510 1.4e-35 153.7 162 51.2
AUR62003356 Chenopodium quinoa HOM05D006825 ORTHO05D008510 1.8e-35 153.3 161 49.1
TAR626G0952 Trochodendron aralioides HOM05D006825 ORTHO05D008510 2.3e-35 152.9 163 48.5
HanXRQChr09g0256941 Helianthus annuus HOM05D006825 ORTHO05D008510 3.1e-35 152.5 162 48.8
PGR119G0791 Punica granatum HOM05D006825 ORTHO05D008510 3.1e-35 152.5 162 48.1
Sopen03g006200 Solanum pennellii HOM05D006825 ORTHO05D008510 3.1e-35 152.5 161 50.3
Zm00001eb417020 Zea mays HOM05D006825 ORTHO05D008510 3.1e-35 152.5 161 51.6
Ciclev10025798m.g Citrus clementina HOM05D006825 ORTHO05D008510 4.0e-35 152.1 161 47.2
Nitab4.5_0000438g0130 Nicotiana tabacum HOM05D006825 ORTHO05D008510 4.0e-35 152.1 161 49.1
QL06p050789 Quercus lobata HOM05D006825 ORTHO05D008510 5.2e-35 151.8 162 49.4
Aqoxy2G04041 Aquilegia oxysepala HOM05D006825 ORTHO05D008510 8.9e-35 151.0 161 51.6
Lalb_Chr05g0229811 Lupinus albus HOM05D006825 ORTHO05D008510 8.9e-35 151.0 164 48.2
vmacro22141 Vaccinium macrocarpon HOM05D006825 ORTHO05D008510 2.0e-34 149.8 161 46.6
VMungo0251G0870 Vigna mungo HOM05D006825 ORTHO05D008510 2.0e-34 149.8 164 51.2
Dinv33645 Davidia involucrata HOM05D006825 ORTHO05D008510 2.6e-34 149.4 161 48.4
PSO675G9026 Papaver somniferum HOM05D006825 ORTHO05D008510 2.6e-34 149.4 226 41.2
Phvul.003G264100 Phaseolus vulgaris HOM05D006825 ORTHO05D008510 3.4e-34 149.1 163 51.5
RcHm_v2.0_Chr2g0099251 Rosa chinensis HOM05D006825 ORTHO05D008510 3.4e-34 149.1 161 49.7
HPP92_013273 Vanilla planifolia HOM05D006825 ORTHO05D008510 3.4e-34 149.1 161 49.7
Hund14052 Selenicereus undatus HOM05D006825 ORTHO05D008510 4.4e-34 148.7 161 46.0
MSTRG.14307 Avicennia marina HOM05D006825 ORTHO05D008510 5.8e-34 148.3 161 46.6
TWI09G1238 Tripterygium wilfordii HOM05D006825 ORTHO05D008510 9.8e-34 147.5 161 48.4
arahy.Tifrunner.gnm1.ann1.89Z5DT Arachis hypogaea HOM05D006825 ORTHO05D008510 1.3e-33 147.1 162 46.9
arahy.Tifrunner.gnm1.ann1.JPTZ14 Arachis hypogaea HOM05D006825 ORTHO05D008510 1.3e-33 147.1 162 46.9
Thecc.01G016500 Theobroma cacao HOM05D006825 ORTHO05D008510 1.3e-33 147.1 162 47.5
CANSAT25G1468 Cannabis sativa HOM05D006825 ORTHO05D008510 2.2e-33 146.4 161 47.2
Migut.H02145 Erythranthe guttata HOM05D006825 ORTHO05D008510 2.2e-33 146.4 162 47.5
FvH4_1g11660 Fragaria vesca HOM05D006825 ORTHO05D008510 2.2e-33 146.4 161 47.8
Peaxi162Scf00635g00623 Petunia axillaris HOM05D006825 ORTHO05D008510 2.9e-33 146.0 161 47.8
Rhsim10G0211100 Rhododendron simsii HOM05D006825 ORTHO05D008510 2.9e-33 146.0 161 46.6
FAN19G1602 Fragaria x ananassa HOM05D006825 ORTHO05D008510 4.9e-33 145.2 161 47.8
Duzib147G0784 Durio zibethinus HOM05D006825 ORTHO05D008510 8.3e-33 144.4 161 45.3
Eucgr.I02337 Eucalyptus grandis HOM05D006825 ORTHO05D008510 1.1e-32 144.1 161 46.6
Ca_22387_v3 Cicer arietinum L. HOM05D006825 ORTHO05D008510 1.9e-32 143.3 163 47.2
Haze_03748 Corylus avellana HOM05D006825 ORTHO05D008510 1.9e-32 143.3 162 46.9
Cpa.g.sc6.269 Carica papaya HOM05D006825 ORTHO05D008510 2.4e-32 142.9 161 50.3
unitig_744.g24494 Utricularia gibba HOM05D000120 ORTHO05D008510 2.4e-32 142.9 161 46.0
FAN26G0347 Fragaria x ananassa HOM05D006825 ORTHO05D008510 3.2e-32 142.5 161 48.4
FAN28G2055 Fragaria x ananassa HOM05D006825 ORTHO05D008510 3.2e-32 142.5 161 46.6
MD02G1129700 Malus domestica HOM05D006825 ORTHO05D008510 3.2e-32 142.5 162 46.9
Medtr8g075430 Medicago truncatula HOM05D006825 ORTHO05D008510 3.2e-32 142.5 163 46.6
Lj4g0003754 Lotus japonicus HOM05D006825 ORTHO05D008510 5.4e-32 141.7 163 48.5
MELO3C007916.2 Cucumis melo HOM05D006825 ORTHO05D008510 7.0e-32 141.4 162 46.3
Cfa006985 Carpinus fangiana HOM05D000348 ORTHO05D000244 9.2e-32 141.0 161 46.6
MD15G1244000 Malus domestica HOM05D006825 ORTHO05D008510 1.2e-31 140.6 162 47.5
Prupe.7G169900 Prunus persica HOM05D006825 ORTHO05D008510 2.0e-31 139.8 162 45.7
Sed0006507 Sechium edule HOM05D000348 ORTHO05D000244 2.0e-31 139.8 161 44.7
ClCG01G020380 Citrullus lanatus HOM05D000348 ORTHO05D000244 2.7e-31 139.4 161 46.0
Lsat_1_v5_gn_4_145901 Lactuca sativa HOM05D006825 ORTHO05D008510 1.0e-30 137.5 162 45.7
CiPaw.08G130700 Carya illinoinensis HOM05D006825 ORTHO05D008510 1.3e-30 137.1 162 45.1
AT5G66180 Arabidopsis thaliana HOM05D006825 ORTHO05D008510 1.7e-30 136.7 163 44.8
THA.LOC104821331 Tarenaya hassleriana HOM05D006825 ORTHO05D008510 2.3e-30 136.3 161 46.0
Mapoly0052s0057 Marchantia polymorpha HOM05D006825 ORTHO05D008510 3.0e-30 136.0 179 45.8
SHI46760 Sapria himalayana HOM05D006825 ORTHO05D008510 3.0e-30 136.0 161 44.1
Sc03g0003620 Simmondsia chinensis HOM05D006825 ORTHO05D008510 3.9e-30 135.6 161 46.0
Glyma.02G047100 Glycine max HOM05D006825 ORTHO05D008510 5.0e-30 135.2 161 45.3
AL8G45350 Arabidopsis lyrata HOM05D006825 ORTHO05D008510 4.3e-29 132.1 163 44.2
Sp2g30510 Schrenkiella parvula HOM05D006825 ORTHO05D008510 4.3e-29 132.1 161 44.1
Carub.0008s2832 Capsella rubella HOM05D006825 ORTHO05D008510 7.3e-29 131.3 163 44.2
CARHR281560 Cardamine hirsuta HOM05D006825 ORTHO05D008510 9.5e-29 131.0 162 45.1
CDE01G0266 Ceratophyllum demersum HOM05D006825 ORTHO05D008510 1.6e-28 130.2 163 45.4
Thhalv10004380m.g Eutrema salsugineum HOM05D006825 ORTHO05D008510 1.6e-28 130.2 161 44.7
AagrBONN_evm.TU.Sc2ySwM_344.4862 Anthoceros agrestis HOM05D006825 ORTHO05D008510 2.8e-28 129.4 167 44.9
Aa31LG1G14680 Aethionema arabicum HOM05D006825 ORTHO05D008510 2.3e-27 126.3 163 41.7
CsaV3_6G047250 Cucumis sativus L. HOM05D006825 ORTHO05D008510 8.9e-27 124.4 161 42.9
Ah.03g148930 Amaranthus hybridus HOM05D006825 ORTHO05D008510 1.5e-26 123.6 148 45.3
A02p44590 Brassica napus HOM05D006825 ORTHO05D008510 2.0e-26 123.2 161 42.9
BraA02t09375Z Brassica rapa HOM05D006825 ORTHO05D008510 2.0e-26 123.2 161 42.9
SGA_v2.0_scaffold80G25916 Striga asiatica HOM05D006825 ORTHO05D008510 2.6e-26 122.9 165 44.8
BolC2t12557H Brassica oleracea HOM05D006825 ORTHO05D008510 3.4e-26 122.5 161 42.2
FAN23G1707 Fragaria x ananassa HOM05D000348 ORTHO05D000244 3.4e-26 122.5 169 42.0
GSVIVG01018762001 Vitis vinifera HOM05D006825 ORTHO05D008510 7.5e-26 121.3 161 41.0
Pp3c17_24030 Physcomitrium patens HOM05D006825 ORTHO05D008510 7.0e-24 114.8 176 42.0
SMO347G0256 Selaginella moellendorffii HOM05D006825 ORTHO05D008510 6.6e-22 108.2 159 42.8
SalBow7G2494 Salvia bowleyana HOM05D006825 ORTHO05D008510 8.6e-22 107.8 161 38.5
BcaC03g18427 Brassica carinata HOM05D006825 ORTHO05D008510 9.5e-21 104.4 137 43.1
SEGI_17861 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 3.1e-19 99.4 52 92.3
TPR.G8413 Trifolium pratense HOM05D006825 ORTHO05D008510 6.8e-19 98.2 62 72.6
SEGI_00238 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 6.6e-14 81.6 39 100.0
CBR_g38194 Chara braunii HOM05D006825 ORTHO05D008510 1.5e-13 80.5 62 61.3
Atru.chr6.2520 Acer truncatum HOM05D006825 ORTHO05D008510 4.7e-12 75.5 111 41.4
Psat4g100720 Pisum sativum HOM05D006825 ORTHO05D008510 1.2e-10 70.9 163 30.7
TPR.G39556 Trifolium pratense HOM05D006825 ORTHO05D008510 4.6e-07 58.9 78 35.9
Medtr8g075450 Medicago truncatula HOM05D006825 ORTHO05D048890 3.0e-06 56.2 40 62.5


User provided reference genes

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