Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 1.5e-137 492.7 225 100.0
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 4.3e-79 298.5 152 86.8
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 4.3e-79 298.5 152 86.8
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 5.6e-79 298.1 152 84.9
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 7.3e-79 297.7 152 86.8
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 9.5e-79 297.4 152 86.8
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 9.5e-79 297.4 151 86.1
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 9.5e-79 297.4 152 85.5
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 1.2e-78 297.0 152 86.8
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 1.2e-78 297.0 154 83.8
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 1.6e-78 296.6 152 85.5
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 2.1e-78 296.2 152 86.2
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 2.8e-78 295.8 152 86.8
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 2.8e-78 295.8 152 84.2
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 2.8e-78 295.8 152 84.2
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 3.6e-78 295.4 152 84.2
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 4.7e-78 295.0 152 84.2
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 6.2e-78 294.7 152 84.9
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 8.1e-78 294.3 151 86.1
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 1.1e-77 293.9 152 82.9
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 1.4e-77 293.5 151 86.1
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 1.4e-77 293.5 152 84.9
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 1.8e-77 293.1 152 83.6
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 1.8e-77 293.1 152 83.6
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 2.3e-77 292.7 152 84.2
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 2.3e-77 292.7 152 84.2
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 3.1e-77 292.4 152 85.5
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 4.0e-77 292.0 152 83.6
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 5.2e-77 291.6 152 83.6
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 5.2e-77 291.6 152 82.2
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 5.2e-77 291.6 152 82.2
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 6.8e-77 291.2 152 82.9
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 8.9e-77 290.8 152 84.2
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 1.2e-76 290.4 152 82.9
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 1.2e-76 290.4 152 81.6
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 1.5e-76 290.0 152 81.6
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 1.5e-76 290.0 152 83.6
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 1.5e-76 290.0 154 80.5
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 1.5e-76 290.0 152 82.2
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 1.5e-76 290.0 152 82.2
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 1.5e-76 290.0 152 85.5
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 2.0e-76 289.7 152 82.2
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 2.6e-76 289.3 152 82.2
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 3.4e-76 288.9 155 80.0
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 3.4e-76 288.9 155 79.4
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 4.4e-76 288.5 154 80.5
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 4.4e-76 288.5 155 79.4
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 4.4e-76 288.5 152 81.6
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 5.8e-76 288.1 154 80.5
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 5.8e-76 288.1 151 84.8
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 7.6e-76 287.7 153 80.4
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 7.6e-76 287.7 151 83.4
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 9.9e-76 287.3 154 79.2
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 9.9e-76 287.3 154 79.2
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 9.9e-76 287.3 154 79.2
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 9.9e-76 287.3 154 79.2
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 9.9e-76 287.3 154 79.2
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 9.9e-76 287.3 153 81.7
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 1.3e-75 287.0 154 79.9
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 1.7e-75 286.6 152 79.6
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 1.7e-75 286.6 152 79.6
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 1.7e-75 286.6 152 81.6
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 1.7e-75 286.6 152 82.2
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 1.7e-75 286.6 151 82.1
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 2.9e-75 285.8 154 78.6
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 2.9e-75 285.8 151 80.1
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 2.9e-75 285.8 152 82.2
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 3.7e-75 285.4 152 82.2
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 3.7e-75 285.4 152 80.3
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 2.4e-74 282.7 143 88.1
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 5.4e-74 281.6 152 78.3
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 5.4e-74 281.6 152 82.2
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 5.4e-74 281.6 145 84.1
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 9.2e-74 280.8 151 82.8
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 2.1e-73 279.6 144 85.4
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 2.7e-73 279.3 145 84.8
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 2.7e-73 279.3 152 82.9
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 3.5e-73 278.9 149 83.9
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 7.8e-73 277.7 152 80.9
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 1.7e-72 276.6 153 76.5
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 2.3e-72 276.2 146 81.5
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 3.0e-72 275.8 171 73.7
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 8.6e-72 274.2 144 82.6
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 1.1e-71 273.9 143 83.2
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 1.6e-70 270.0 154 76.6
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 6.2e-70 268.1 152 78.3
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 1.4e-69 266.9 167 73.1
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 1.3e-67 260.4 152 77.6
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 1.9e-66 256.5 152 73.0
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 7.1e-66 254.6 152 73.7
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 3.5e-65 252.3 132 82.6
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 1.0e-64 250.8 154 74.0
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 1.3e-64 250.4 152 74.3
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 4.8e-62 241.9 151 71.5
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 1.5e-60 236.9 116 87.9
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 2.6e-60 236.1 151 68.9
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 5.6e-55 218.4 111 88.3
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 1.2e-52 210.7 99 91.9
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 4.3e-47 192.2 154 59.7
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 7.4e-31 138.3 61 90.2
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 2.4e-29 133.3 59 89.8
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.0e-27 127.9 90 71.1
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 3.8e-27 125.9 71 83.1


User provided reference genes

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