Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37993 Sequoiadendron giganteum HOM05D000029 ORTHO05D023372 3.1e-103 378.6 212 100.0
SEGI_14389 Sequoiadendron giganteum HOM05D000029 ORTHO05D002500 5.0e-29 132.1 150 55.3
SEGI_36696 Sequoiadendron giganteum HOM05D000029 ORTHO05D002500 3.0e-26 122.9 147 51.7
SEGI_30584 Sequoiadendron giganteum HOM05D000029 ORTHO05D002500 3.7e-24 115.9 149 48.3
SEGI_35620 Sequoiadendron giganteum HOM05D000029 ORTHO05D002500 3.5e-22 109.4 139 48.9
SEGI_10319 Sequoiadendron giganteum HOM05D000029 ORTHO05D000455 7.2e-20 101.7 74 70.3
SEGI_21013 Sequoiadendron giganteum HOM05D000029 ORTHO05D023372 1.4e-18 97.4 121 52.9
Peaxi162Scf00391g00319 Petunia axillaris HOM05D000029 ORTHO05D006810 3.0e-10 69.7 168 34.5
CANSAT11G2530 Cannabis sativa HOM05D000029 ORTHO05D002500 6.8e-10 68.6 149 36.9
FAN25G0867 Fragaria x ananassa HOM05D001506 ORTHO05D000455 8.9e-10 68.2 170 32.4
Nn5g28014 Nelumbo nucifera HOM05D000029 ORTHO05D002500 8.9e-10 68.2 155 36.1
Sabra09G0063400 Salix brachista HOM05D000029 ORTHO05D002500 1.2e-09 67.8 145 34.5
Sed0002357 Sechium edule HOM05D000029 ORTHO05D006810 2.0e-09 67.0 151 33.1
DCAR_021924 Daucus carota HOM05D000029 ORTHO05D002500 2.6e-09 66.6 142 33.8
Nn1g05940 Nelumbo nucifera HOM05D000029 ORTHO05D002500 2.6e-09 66.6 143 37.1
CDE02G2357 Ceratophyllum demersum HOM05D000029 ORTHO05D002500 3.4e-09 66.2 250 30.0
AUR62023560 Chenopodium quinoa HOM05D000029 ORTHO05D006810 3.4e-09 66.2 124 37.9
Gohir.D04G172600 Gossypium hirsutum HOM05D000029 ORTHO05D002500 3.4e-09 66.2 120 39.2
Gorai.012G162000 Gossypium raimondii HOM05D000029 ORTHO05D002500 3.4e-09 66.2 120 39.2
Potri.009G081800 Populus trichocarpa HOM05D000029 ORTHO05D002500 3.4e-09 66.2 145 33.8
SGA_v2.0_scaffold269G46247 Striga asiatica HOM05D000029 ORTHO05D001395 3.4e-09 66.2 145 36.6
Prupe.8G157200 Prunus persica HOM05D000029 ORTHO05D002500 4.4e-09 65.9 144 35.4
Ciclev10027748m.g Citrus clementina HOM05D000029 ORTHO05D002500 5.7e-09 65.5 143 34.3
MD10G1115100 Malus domestica HOM05D000029 ORTHO05D002500 9.8e-09 64.7 144 35.4
Eucgr.C04312 Eucalyptus grandis HOM05D000311 ORTHO05D000183 1.7e-08 63.9 134 33.6
Atru.chr5.2144 Acer truncatum HOM05D000029 ORTHO05D002500 2.9e-08 63.2 143 33.6
Actinidia36399 Actinidia chinensis HOM05D000029 ORTHO05D001395 2.9e-08 63.2 108 34.3
Cc02_g20390 Coffea canephora HOM05D000029 ORTHO05D002500 2.9e-08 63.2 144 33.3
Duzib132G1037 Durio zibethinus HOM05D000029 ORTHO05D002500 2.9e-08 63.2 143 35.7
QL11p027678 Quercus lobata HOM05D000029 ORTHO05D002500 2.9e-08 63.2 143 35.0
HPP92_021666 Vanilla planifolia HOM05D000029 ORTHO05D001395 2.9e-08 63.2 93 38.7
Solyc11g020280.2 Solanum lycopersicum HOM05D000029 ORTHO05D006810 4.9e-08 62.4 140 35.0
HPP92_012268 Vanilla planifolia HOM05D000029 ORTHO05D002500 4.9e-08 62.4 156 34.0
Sopen11g010570 Solanum pennellii HOM05D000029 ORTHO05D006810 6.4e-08 62.0 140 35.0
DCAR_014393 Daucus carota HOM05D000029 ORTHO05D006810 8.3e-08 61.6 133 36.8
Cpa.g.sc20.68 Carica papaya HOM05D000029 ORTHO05D002500 1.1e-07 61.2 152 34.9
SalBow7G0903 Salvia bowleyana HOM05D000071 ORTHO05D000029 1.1e-07 61.2 127 37.0
Gohir.A04G127912 Gossypium hirsutum HOM05D000029 ORTHO05D002500 1.4e-07 60.8 136 36.0
GSVIVG01036966001 Vitis vinifera HOM05D000029 ORTHO05D002500 1.4e-07 60.8 143 35.0
CiPaw.05G025000 Carya illinoinensis HOM05D000029 ORTHO05D002500 1.8e-07 60.5 143 34.3
Manes.18G107100 Manihot esculenta HOM05D000029 ORTHO05D006810 1.8e-07 60.5 133 38.3
Nn3g21143 Nelumbo nucifera HOM05D000094 ORTHO05D005974 1.8e-07 60.5 217 27.2
SalBow7G3001 Salvia bowleyana HOM05D000071 ORTHO05D000029 1.8e-07 60.5 127 37.0
THA.LOC104826803 Tarenaya hassleriana HOM05D000517 ORTHO05D003374 1.8e-07 60.5 138 35.5
CiPaw.07G040300 Carya illinoinensis HOM05D000029 ORTHO05D001395 2.4e-07 60.1 103 35.0
COL.COLO4_24634 Corchorus olitorius HOM05D000029 ORTHO05D006810 2.4e-07 60.1 133 36.1
Nitab4.5_0000365g0170 Nicotiana tabacum HOM05D000029 ORTHO05D006810 2.4e-07 60.1 142 35.2
CsaV3_3G048330 Cucumis sativus L. HOM05D000029 ORTHO05D005879 3.2e-07 59.7 139 34.5
MD08G1217600 Malus domestica HOM05D000029 ORTHO05D006810 4.1e-07 59.3 142 33.8
Prupe.4G162000 Prunus persica HOM05D001506 ORTHO05D000455 5.4e-07 58.9 140 35.7
Prupe.6G009700 Prunus persica HOM05D001506 ORTHO05D000455 5.4e-07 58.9 144 34.0
RcHm_v2.0_Chr7g0207421 Rosa chinensis HOM05D000071 ORTHO05D000029 5.4e-07 58.9 135 38.5
Ah.02g119230 Amaranthus hybridus HOM05D000033 ORTHO05D001614 7.0e-07 58.5 160 32.5
CDE04G3000 Ceratophyllum demersum HOM05D000029 ORTHO05D002500 7.0e-07 58.5 151 31.8
FAN04G1307 Fragaria x ananassa HOM05D000029 ORTHO05D005879 7.0e-07 58.5 83 39.8
FAN08G1497 Fragaria x ananassa HOM05D000029 ORTHO05D005879 7.0e-07 58.5 83 39.8
Potri.004G058500 Populus trichocarpa HOM05D000094 ORTHO05D005974 7.0e-07 58.5 135 30.4
QL09p053110 Quercus lobata HOM05D000071 ORTHO05D000029 7.0e-07 58.5 130 33.1
TWI38G1952 Tripterygium wilfordii HOM05D000094 ORTHO05D005974 7.0e-07 58.5 180 26.1
TWI59G0548 Tripterygium wilfordii HOM05D000029 ORTHO05D002500 7.0e-07 58.5 144 33.3
Ca_24660_v3 Cicer arietinum L. HOM05D000029 ORTHO05D001395 9.2e-07 58.2 153 31.4
MELO3C014948.2 Cucumis melo HOM05D000029 ORTHO05D001395 9.2e-07 58.2 96 32.3
Dinv22027 Davidia involucrata HOM05D000029 ORTHO05D002500 9.2e-07 58.2 150 33.3
FvH4_5g33580 Fragaria vesca HOM05D000029 ORTHO05D005879 9.2e-07 58.2 83 39.8
FAN18G0476 Fragaria x ananassa HOM05D000029 ORTHO05D005879 9.2e-07 58.2 83 39.8
Lj4A80T29 Lonicera japonica HOM05D000029 ORTHO05D002500 9.2e-07 58.2 154 33.1
GSVIVG01033977001 Vitis vinifera HOM05D000021 ORTHO05D000010 9.2e-07 58.2 159 32.7
Gohir.D01G170300 Gossypium hirsutum HOM05D000029 ORTHO05D002500 1.2e-06 57.8 144 31.9
Lalb_Chr20g0122711 Lupinus albus HOM05D000029 ORTHO05D002500 1.2e-06 57.8 169 30.2
PGR083G0673 Punica granatum HOM05D000094 ORTHO05D003883 1.2e-06 57.8 149 31.5
PGR089G0006 Punica granatum HOM05D000094 ORTHO05D003883 1.2e-06 57.8 149 31.5
Lj1g0017370 Lotus japonicus HOM05D000071 ORTHO05D000029 1.6e-06 57.4 147 37.4
PGR042G1539 Punica granatum HOM05D000029 ORTHO05D002500 1.6e-06 57.4 136 34.6
QL11p027050 Quercus lobata HOM05D000029 ORTHO05D002500 1.6e-06 57.4 143 32.9
Rhsim01G0080400 Rhododendron simsii HOM05D008549 ORTHO05D023372 1.6e-06 57.4 51 58.8
RhsimUnG0068600 Rhododendron simsii HOM05D000029 ORTHO05D023372 1.6e-06 57.4 51 58.8
TWI38G0466 Tripterygium wilfordii HOM05D000094 ORTHO05D005974 1.6e-06 57.4 187 25.7
Aqoxy6G01491 Aquilegia oxysepala HOM05D000029 ORTHO05D002500 2.0e-06 57.0 148 34.5
Cc02_g16030 Coffea canephora HOM05D000021 ORTHO05D000010 2.0e-06 57.0 182 31.3
Eucgr.F02182 Eucalyptus grandis HOM05D000029 ORTHO05D005879 2.0e-06 57.0 127 33.1
SalBow7G0233 Salvia bowleyana HOM05D000071 ORTHO05D000029 2.0e-06 57.0 125 36.0
Duzib268G0510 Durio zibethinus HOM05D000053 ORTHO05D000035 2.7e-06 56.6 104 36.5
FvH4_5g33590 Fragaria vesca HOM05D000029 ORTHO05D002500 2.7e-06 56.6 143 32.2
FAN18G2741 Fragaria x ananassa HOM05D000029 ORTHO05D002500 2.7e-06 56.6 143 32.2
PSO541G4428 Papaver somniferum HOM05D000029 ORTHO05D005879 2.7e-06 56.6 142 31.0
Peaxi162Scf00096g00152 Petunia axillaris HOM05D000029 ORTHO05D001395 2.7e-06 56.6 72 36.1
Prupe.6G116800 Prunus persica HOM05D001506 ORTHO05D000455 2.7e-06 56.6 145 34.5
BcaC02g09387 Brassica carinata HOM05D000053 ORTHO05D000035 3.5e-06 56.2 171 28.1
BolC4t25791H Brassica oleracea HOM05D000053 ORTHO05D000035 3.5e-06 56.2 171 28.1
CAN.G411.89 Capsicum annuum HOM05D000094 ORTHO05D005974 3.5e-06 56.2 170 28.8
CiPaw.05G209900 Carya illinoinensis HOM05D000071 ORTHO05D000029 3.5e-06 56.2 123 37.4
Duzib248G0329 Durio zibethinus HOM05D000029 ORTHO05D002500 3.5e-06 56.2 136 36.0
Lj1g0017804 Lotus japonicus HOM05D000029 ORTHO05D002500 3.5e-06 56.2 140 32.1
MD16G1007500 Malus domestica HOM05D000094 ORTHO05D000455 3.5e-06 56.2 142 32.4
Medtr4g021705 Medicago truncatula HOM05D000311 ORTHO05D000183 3.5e-06 56.2 82 36.6
Psat1g212240 Pisum sativum HOM05D000029 ORTHO05D002500 3.5e-06 56.2 144 34.7
QL09p011709 Quercus lobata HOM05D000071 ORTHO05D000029 3.5e-06 56.2 180 28.9
TWI36G1158 Tripterygium wilfordii HOM05D000029 ORTHO05D005879 3.5e-06 56.2 143 32.2
TAR626G1950 Trochodendron aralioides HOM05D000094 ORTHO05D005974 3.5e-06 56.2 163 30.7
CSS0010345 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D002500 4.6e-06 55.8 244 27.0
CSS0033403 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D002500 4.6e-06 55.8 244 27.0
CsaV3_3G007020 Cucumis sativus L. HOM05D000029 ORTHO05D001395 4.6e-06 55.8 75 34.7
Duzib268G0774 Durio zibethinus HOM05D000053 ORTHO05D000035 4.6e-06 55.8 104 36.5
Hma1.2p1_1078F.1_g254820 Hydrangea macrophylla HOM05D000029 ORTHO05D002500 4.6e-06 55.8 145 33.1
Lsat_1_v5_gn_6_108000 Lactuca sativa HOM05D000029 ORTHO05D005879 4.6e-06 55.8 126 34.1
MD03G1017100 Malus domestica HOM05D001506 ORTHO05D000455 4.6e-06 55.8 101 37.6
Sed0000247 Sechium edule HOM05D000029 ORTHO05D005879 4.6e-06 55.8 146 32.9
AagrBONN_evm.TU.Sc2ySwM_344.1982 Anthoceros agrestis HOM05D002405 ORTHO05D002483 5.9e-06 55.5 88 36.4
BolC1t01062H Brassica oleracea HOM05D000029 ORTHO05D001395 5.9e-06 55.5 91 36.3
CANSAT25G1126 Cannabis sativa HOM05D000029 ORTHO05D002500 5.9e-06 55.5 144 31.9
CDE01G0019 Ceratophyllum demersum HOM05D000029 ORTHO05D002500 5.9e-06 55.5 165 32.7
Duzib268G0770 Durio zibethinus HOM05D000053 ORTHO05D000035 5.9e-06 55.5 104 37.5
Duzib268G1127 Durio zibethinus HOM05D000053 ORTHO05D000035 5.9e-06 55.5 175 29.1
Potri.011G067900 Populus trichocarpa HOM05D000094 ORTHO05D005974 5.9e-06 55.5 138 31.2
Prupe.4G169500 Prunus persica HOM05D001506 ORTHO05D000455 5.9e-06 55.5 81 42.0
AagrBONN_evm.TU.Sc2ySwM_344.1981 Anthoceros agrestis HOM05D010742 ORTHO05D000029 7.8e-06 55.1 88 35.2
C01p11000 Brassica napus HOM05D000029 ORTHO05D001395 7.8e-06 55.1 91 36.3
ClCG10G008090 Citrullus lanatus HOM05D000029 ORTHO05D001395 7.8e-06 55.1 75 36.0
HanXRQChr15g0471911 Helianthus annuus HOM05D000033 ORTHO05D001614 7.8e-06 55.1 176 31.8
MD00G1077400 Malus domestica HOM05D001506 ORTHO05D000455 7.8e-06 55.1 138 33.3
Medtr6g016140 Medicago truncatula HOM05D000071 ORTHO05D000029 7.8e-06 55.1 153 33.3
Nitab4.5_0000396g0050 Nicotiana tabacum HOM05D000029 ORTHO05D001395 7.8e-06 55.1 84 35.7
Oeu059138.1 Olea europaea HOM05D000029 ORTHO05D002500 7.8e-06 55.1 145 31.7
PGSC0003DMG400009181 Solanum tuberosum HOM05D000094 ORTHO05D000455 7.8e-06 55.1 92 37.0
vmacro04617 Vaccinium macrocarpon HOM05D000029 ORTHO05D002500 7.8e-06 55.1 147 34.0


User provided reference genes

Program Settings