Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37972 Sequoiadendron giganteum HOM05D002573 ORTHO05D029974 3.1e-102 375.2 195 100.0
SEGI_39389 Sequoiadendron giganteum HOM05D002573 ORTHO05D029974 3.1e-102 375.2 195 100.0
ATR0559G261 Amborella trichopoda HOM05D002573 ORTHO05D002918 3.0e-20 102.8 139 50.4
Atru.chr3.3849 Acer truncatum HOM05D002573 ORTHO05D002918 3.9e-20 102.4 142 50.0
THA.LOC104801522 Tarenaya hassleriana HOM05D002573 ORTHO05D002918 5.1e-20 102.1 141 49.6
HanXRQChr05g0143791 Helianthus annuus HOM05D002573 ORTHO05D002918 5.6e-19 98.6 143 49.0
Nitab4.5_0001800g0050 Nicotiana tabacum HOM05D002573 ORTHO05D002918 5.6e-19 98.6 142 47.9
DCAR_018900 Daucus carota HOM05D002573 ORTHO05D002918 9.6e-19 97.8 142 47.2
CANSAT54G0461 Cannabis sativa HOM05D002573 ORTHO05D002918 1.3e-18 97.4 142 46.5
Gohir.A03G040700 Gossypium hirsutum HOM05D002573 ORTHO05D002918 1.6e-18 97.1 144 48.6
Gorai.003G134000 Gossypium raimondii HOM05D002573 ORTHO05D002918 1.6e-18 97.1 144 48.6
Aqoxy4G02959 Aquilegia oxysepala HOM05D002573 ORTHO05D002918 2.8e-18 96.3 141 46.1
Gohir.D03G127400 Gossypium hirsutum HOM05D002573 ORTHO05D002918 2.8e-18 96.3 146 48.6
Nitab4.5_0005133g0030 Nicotiana tabacum HOM05D002573 ORTHO05D002918 2.8e-18 96.3 142 47.9
PGSC0003DMG400000401 Solanum tuberosum HOM05D002573 ORTHO05D002918 3.7e-18 95.9 143 49.0
TAR623G0952 Trochodendron aralioides HOM05D002573 ORTHO05D002918 4.8e-18 95.5 142 48.6
ClCG03G001650 Citrullus lanatus HOM05D002573 ORTHO05D002918 6.2e-18 95.1 147 47.6
ECA248G2395 Erigeron canadensis HOM05D002573 ORTHO05D002918 6.2e-18 95.1 141 48.9
Lsat_1_v5_gn_5_168921 Lactuca sativa HOM05D002573 ORTHO05D002918 8.1e-18 94.7 142 47.2
Cfa011479 Carpinus fangiana HOM05D002573 ORTHO05D002918 1.1e-17 94.4 142 47.9
HanXRQChr11g0331861 Helianthus annuus HOM05D002573 ORTHO05D002918 1.1e-17 94.4 144 49.3
Solyc11g066110.2 Solanum lycopersicum HOM05D002573 ORTHO05D002918 1.1e-17 94.4 143 49.0
Sopen11g025870 Solanum pennellii HOM05D002573 ORTHO05D002918 1.1e-17 94.4 143 49.0
Thecc.09G324400 Theobroma cacao HOM05D002573 ORTHO05D002918 1.1e-17 94.4 142 47.2
MD11G1111800 Malus domestica HOM05D002573 ORTHO05D002918 1.4e-17 94.0 140 45.7
GSVIVG01024995001 Vitis vinifera HOM05D002573 ORTHO05D002918 1.8e-17 93.6 141 47.5
Haze_24066 Corylus avellana HOM05D002573 ORTHO05D002918 2.4e-17 93.2 141 47.5
CAN.G901.3 Capsicum annuum HOM05D002573 ORTHO05D002918 3.1e-17 92.8 142 47.9
Duzib170G0024 Durio zibethinus HOM05D002573 ORTHO05D002918 4.0e-17 92.4 144 49.3
FAN21G0053 Fragaria x ananassa HOM05D002573 ORTHO05D002918 4.0e-17 92.4 142 45.1
Glyma.11G140600 Glycine max HOM05D002573 ORTHO05D002918 5.3e-17 92.0 142 47.2
CDE09G0335 Ceratophyllum demersum HOM05D002573 ORTHO05D002918 6.9e-17 91.7 89 61.8
Dinv03609 Davidia involucrata HOM05D002573 ORTHO05D002918 6.9e-17 91.7 145 48.3
Duzib150G0668 Durio zibethinus HOM05D002573 ORTHO05D002918 6.9e-17 91.7 144 47.2
SalBow3G3017 Salvia bowleyana HOM05D002573 ORTHO05D002918 6.9e-17 91.7 140 48.6
PSO384G2401 Papaver somniferum HOM05D002573 ORTHO05D002918 9.0e-17 91.3 144 49.3
Potri.001G237800 Populus trichocarpa HOM05D002573 ORTHO05D002918 9.0e-17 91.3 142 46.5
CSS0010392 Camellia sinensis var. sinensis HOM05D002573 ORTHO05D002918 1.2e-16 90.9 144 47.9
MD00G1137500 Malus domestica HOM05D002573 ORTHO05D002918 1.2e-16 90.9 142 44.4
Sc21g0005650 Simmondsia chinensis HOM05D002573 ORTHO05D002918 1.2e-16 90.9 142 45.8
FAN25G1361 Fragaria x ananassa HOM05D002573 ORTHO05D002918 1.5e-16 90.5 142 45.1
Peaxi162Scf00406g00414 Petunia axillaris HOM05D002573 ORTHO05D002918 1.5e-16 90.5 140 47.1
vmacro14526 Vaccinium macrocarpon HOM05D002573 ORTHO05D002918 1.5e-16 90.5 144 47.2
PGR119G1144 Punica granatum HOM05D002573 ORTHO05D002918 2.6e-16 89.7 142 45.8
Sabra09G0020100 Salix brachista HOM05D002573 ORTHO05D002918 2.6e-16 89.7 142 46.5
Sc21g0005630 Simmondsia chinensis HOM05D002573 ORTHO05D002918 2.6e-16 89.7 142 45.1
Dinv01575 Davidia involucrata HOM05D002573 ORTHO05D002918 3.4e-16 89.4 145 45.5
Eucgr.B02380 Eucalyptus grandis HOM05D002573 ORTHO05D002918 3.4e-16 89.4 142 46.5
Nn2g10403 Nelumbo nucifera HOM05D002573 ORTHO05D002918 3.4e-16 89.4 142 48.6
QL01p032655 Quercus lobata HOM05D002573 ORTHO05D002918 3.4e-16 89.4 141 47.5
Ciclev10028417m.g Citrus clementina HOM05D002573 ORTHO05D002918 4.5e-16 89.0 142 48.6
Lj3g0025269 Lotus japonicus HOM05D002573 ORTHO05D002918 4.5e-16 89.0 142 45.1
MBI14_g11692_MAGBIO Magnolia biondii HOM05D002573 ORTHO05D002918 4.5e-16 89.0 152 43.4
Manes.04G033500 Manihot esculenta HOM05D002573 ORTHO05D002918 4.5e-16 89.0 146 47.3
Actinidia23952 Actinidia chinensis HOM05D002573 ORTHO05D002918 5.8e-16 88.6 142 45.1
Cc01_g12660 Coffea canephora HOM05D002573 ORTHO05D002918 5.8e-16 88.6 145 47.6
FAN16G2855 Fragaria x ananassa HOM05D002573 ORTHO05D002918 5.8e-16 88.6 142 45.1
TWI79G0476 Tripterygium wilfordii HOM05D002573 ORTHO05D002918 5.8e-16 88.6 146 47.3
VMungo1127G1942 Vigna mungo HOM05D002573 ORTHO05D002918 5.8e-16 88.6 142 46.5
SGA_v2.0_scaffold230G43370 Striga asiatica HOM05D002573 ORTHO05D002918 7.6e-16 88.2 141 46.1
TWI75G0749 Tripterygium wilfordii HOM05D002573 ORTHO05D002918 7.6e-16 88.2 142 44.4
Prupe.6G080200 Prunus persica HOM05D002573 ORTHO05D002918 9.9e-16 87.8 142 43.0
Oeu054161.1 Olea europaea HOM05D002573 ORTHO05D002918 1.3e-15 87.4 138 46.4
arahy.Tifrunner.gnm1.ann1.JSA0W9 Arachis hypogaea HOM05D002573 ORTHO05D002918 2.2e-15 86.7 141 46.1
arahy.Tifrunner.gnm1.ann1.NS9W62 Arachis hypogaea HOM05D002573 ORTHO05D002918 2.2e-15 86.7 141 46.1
BcaC02g08136 Brassica carinata HOM05D002573 ORTHO05D002918 2.2e-15 86.7 141 46.1
BolC4t27325H Brassica oleracea HOM05D002573 ORTHO05D002918 2.2e-15 86.7 141 46.1
BraA04t17753Z Brassica rapa HOM05D002573 ORTHO05D002918 2.2e-15 86.7 141 46.1
C04p58000 Brassica napus HOM05D002573 ORTHO05D002918 2.9e-15 86.3 141 46.1
Hma1.2p1_1897F.1_g306870 Hydrangea macrophylla HOM05D002573 ORTHO05D002918 4.9e-15 85.5 142 44.4
Medtr4g063705 Medicago truncatula HOM05D002573 ORTHO05D002918 4.9e-15 85.5 138 47.8
BcaB06g28253 Brassica carinata HOM05D002573 ORTHO05D002918 6.4e-15 85.1 141 45.4
Hma1.2p1_0035F.1_g022230 Hydrangea macrophylla HOM05D002573 ORTHO05D002918 8.4e-15 84.7 143 44.8
Ca_19177_v3 Cicer arietinum L. HOM05D002573 ORTHO05D002918 1.4e-14 84.0 142 46.5
Sp4g11640 Schrenkiella parvula HOM05D002573 ORTHO05D002918 1.4e-14 84.0 141 45.4
Hund18921 Selenicereus undatus HOM05D002573 ORTHO05D002918 1.4e-14 84.0 138 41.3
HPP92_014312 Vanilla planifolia HOM05D002573 ORTHO05D002918 1.9e-14 83.6 142 43.0
TPR.G14475 Trifolium pratense HOM05D002573 ORTHO05D002918 2.4e-14 83.2 138 45.7
Sed0016000 Sechium edule HOM05D002573 ORTHO05D002918 3.2e-14 82.8 145 46.2
COL.COLO4_18485 Corchorus olitorius HOM05D002573 ORTHO05D002918 4.2e-14 82.4 146 45.9
CiPaw.13G096600 Carya illinoinensis HOM05D002573 ORTHO05D002918 5.5e-14 82.0 142 40.8
Phvul.011G065100 Phaseolus vulgaris HOM05D002573 ORTHO05D002918 5.5e-14 82.0 142 44.4
Psat7g218800 Pisum sativum HOM05D002573 ORTHO05D002918 5.5e-14 82.0 68 69.1
Sabra16G0143400 Salix brachista HOM05D002573 ORTHO05D002918 5.5e-14 82.0 140 44.3
CBR_g40498 Chara braunii HOM05D002573 ORTHO05D002918 7.1e-14 81.6 145 40.7
CsaV3_1G034030 Cucumis sativus L. HOM05D002573 ORTHO05D002918 7.1e-14 81.6 148 44.6
A04p21870 Brassica napus HOM05D002573 ORTHO05D002918 9.3e-14 81.3 141 43.3
FvH4_3g35720 Fragaria vesca HOM05D002573 ORTHO05D002918 9.3e-14 81.3 142 42.3
FAN11G1808 Fragaria x ananassa HOM05D002573 ORTHO05D002918 9.3e-14 81.3 142 42.3
Potri.009G029100 Populus trichocarpa HOM05D002573 ORTHO05D002918 9.3e-14 81.3 142 43.0
AagrBONN_evm.TU.Sc2ySwM_368.2480 Anthoceros agrestis HOM05D002573 ORTHO05D002918 1.2e-13 80.9 72 63.9
Zm00001eb124300 Zea mays HOM05D002573 ORTHO05D002918 2.1e-13 80.1 138 45.7
Cpa.g.sc190.3 Carica papaya HOM05D002573 ORTHO05D002918 3.5e-13 79.3 97 54.6
Glyma.12G064100 Glycine max HOM05D002573 ORTHO05D002918 3.5e-13 79.3 68 64.7
Aa31LG5G7400 Aethionema arabicum HOM05D002573 ORTHO05D002918 6.0e-13 78.6 141 41.8
Os01g0151200 Oryza sativa ssp. japonica HOM05D002573 ORTHO05D002918 6.0e-13 78.6 70 58.6
RcHm_v2.0_Chr5g0063871 Rosa chinensis HOM05D002573 ORTHO05D002918 7.9e-13 78.2 120 42.5
CARHR121940 Cardamine hirsuta HOM05D002573 ORTHO05D002918 1.3e-12 77.4 145 42.8
AUR62001810 Chenopodium quinoa HOM05D002573 ORTHO05D002918 1.3e-12 77.4 141 43.3
AUR62009598 Chenopodium quinoa HOM05D002573 ORTHO05D002918 1.8e-12 77.0 139 43.2
Ah.08g219220 Amaranthus hybridus HOM05D002573 ORTHO05D002918 2.3e-12 76.6 139 43.9
Migut.D02113 Erythranthe guttata HOM05D002573 ORTHO05D002918 3.0e-12 76.3 141 44.7
EL10Ac7g15991 Beta vulgaris HOM05D002573 ORTHO05D002918 5.1e-12 75.5 140 43.6
Thhalv10016643m.g Eutrema salsugineum HOM05D002573 ORTHO05D002918 5.1e-12 75.5 145 40.7
Rhsim01G0226500 Rhododendron simsii HOM05D002573 ORTHO05D002918 5.1e-12 75.5 121 40.5
Zm00001eb335940 Zea mays HOM05D002573 ORTHO05D002918 5.1e-12 75.5 70 58.6
CDE02G3214 Ceratophyllum demersum HOM05D002573 ORTHO05D002918 1.1e-11 74.3 128 42.2
Migut.G01104 Erythranthe guttata HOM05D002573 ORTHO05D002918 1.9e-11 73.6 82 56.1
Lalb_Chr03g0026741 Lupinus albus HOM05D002573 ORTHO05D002918 1.9e-11 73.6 142 43.7
CiPaw.14G070200 Carya illinoinensis HOM05D002573 ORTHO05D002918 7.4e-11 71.6 43 79.1
Hund04992 Selenicereus undatus HOM05D002573 ORTHO05D002918 1.6e-10 70.5 76 53.9
Pp3c10_17110 Physcomitrium patens HOM05D002573 ORTHO05D002918 2.8e-10 69.7 75 58.7
AL4G23330 Arabidopsis lyrata HOM05D002573 ORTHO05D002918 3.7e-10 69.3 145 41.4
AUR62040625 Chenopodium quinoa HOM05D002573 ORTHO05D002918 3.7e-10 69.3 43 79.1
Lj1A156T63 Lonicera japonica HOM05D002573 ORTHO05D002918 3.7e-10 69.3 101 48.5
Carub.0004s0979 Capsella rubella HOM05D002573 ORTHO05D002918 4.8e-10 68.9 145 42.1
Lsat_1_v5_gn_1_49020 Lactuca sativa HOM05D002573 ORTHO05D029974 6.2e-10 68.6 74 56.8
unitig_899.g15437 Utricularia gibba HOM05D002573 ORTHO05D002918 1.1e-09 67.8 142 41.5
Oeu034493.4 Olea europaea HOM05D002573 ORTHO05D002918 1.8e-09 67.0 141 40.4
Pp3c3_33400 Physcomitrium patens HOM05D002573 ORTHO05D002918 2.4e-09 66.6 168 35.1
MELO3C020652.2 Cucumis melo HOM05D002573 ORTHO05D002918 4.0e-09 65.9 157 35.0
unitig_746.g26583 Utricularia gibba HOM05D000723 ORTHO05D002918 4.0e-09 65.9 140 41.4
AT2G28800 Arabidopsis thaliana HOM05D002573 ORTHO05D002918 5.3e-09 65.5 144 40.3
Lsat_1_v5_gn_6_93660 Lactuca sativa HOM05D002573 ORTHO05D029974 9.0e-09 64.7 74 55.4
SMO196G0258 Selaginella moellendorffii HOM05D002573 ORTHO05D002918 1.7e-07 60.5 44 65.9
Mapoly0015s0158 Marchantia polymorpha HOM05D002573 ORTHO05D002918 7.1e-06 55.1 151 37.7


User provided reference genes

Program Settings