Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37886 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 2.4e-131 472.2 250 100.0
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 6.9e-86 321.2 220 78.2
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 5.8e-85 318.2 219 77.2
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 7.6e-85 317.8 220 76.4
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 1.3e-84 317.0 220 76.8
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 1.7e-84 316.6 220 76.4
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 2.2e-84 316.2 220 75.5
MBI05_g21270_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 2.9e-84 315.8 220 75.9
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 2.9e-84 315.8 220 76.8
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 3.8e-84 315.5 220 75.9
arahy.Tifrunner.gnm1.ann1.N9X86H Arachis hypogaea HOM05D004408 ORTHO05D005486 6.4e-84 314.7 223 75.3
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 8.4e-84 314.3 220 75.9
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 1.9e-83 313.2 220 75.5
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 1.9e-83 313.2 220 76.8
Atru.chr2.666 Acer truncatum HOM05D004408 ORTHO05D005486 2.4e-83 312.8 220 75.0
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 2.4e-83 312.8 220 75.0
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 2.4e-83 312.8 220 75.0
CiPaw.07G007800 Carya illinoinensis HOM05D004408 ORTHO05D005486 3.2e-83 312.4 220 76.4
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 4.2e-83 312.0 220 75.5
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 5.4e-83 311.6 224 75.4
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 5.4e-83 311.6 220 74.1
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 7.1e-83 311.2 220 74.5
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 9.3e-83 310.8 224 75.9
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 1.2e-82 310.5 220 75.0
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 1.2e-82 310.5 224 75.4
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 1.6e-82 310.1 220 73.6
Lsat_1_v5_gn_4_142681 Lactuca sativa HOM05D004408 ORTHO05D005486 1.6e-82 310.1 220 76.8
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 1.6e-82 310.1 221 75.6
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 2.1e-82 309.7 220 74.5
C02p57800 Brassica napus HOM05D004408 ORTHO05D005486 2.7e-82 309.3 220 72.3
BolC2t11853H Brassica oleracea HOM05D004408 ORTHO05D005486 2.7e-82 309.3 220 72.3
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 2.7e-82 309.3 225 73.3
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.7e-82 309.3 224 75.0
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 2.7e-82 309.3 220 75.0
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 2.7e-82 309.3 220 74.1
Psat6g147800 Pisum sativum HOM05D004408 ORTHO05D005486 2.7e-82 309.3 220 74.1
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 3.5e-82 308.9 220 75.0
Dinv05121 Davidia involucrata HOM05D004408 ORTHO05D005486 3.5e-82 308.9 220 74.5
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.6e-82 308.5 224 74.6
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 4.6e-82 308.5 220 76.4
BcaC03g17767 Brassica carinata HOM05D004408 ORTHO05D005486 6.0e-82 308.1 220 71.8
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 6.0e-82 308.1 220 74.5
A02p38480 Brassica napus HOM05D004408 ORTHO05D005486 1.3e-81 307.0 220 71.4
BraA02t08826Z Brassica rapa HOM05D004408 ORTHO05D005486 1.3e-81 307.0 220 71.4
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.3e-81 307.0 220 75.0
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 1.3e-81 307.0 220 75.5
THA.LOC104818650 Tarenaya hassleriana HOM05D004408 ORTHO05D005486 1.7e-81 306.6 220 72.7
HPP92_012131 Vanilla planifolia HOM05D004408 ORTHO05D005486 1.7e-81 306.6 220 72.3
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 3.9e-81 305.4 220 75.0
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 5.1e-81 305.1 220 74.1
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 5.1e-81 305.1 224 74.6
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 1.1e-80 303.9 220 73.6
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 1.1e-80 303.9 220 73.2
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 1.1e-80 303.9 220 74.5
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 1.5e-80 303.5 220 73.2
BcaB07g34188 Brassica carinata HOM05D004408 ORTHO05D005486 1.9e-80 303.1 220 71.8
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 1.9e-80 303.1 220 72.7
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 1.9e-80 303.1 220 74.1
CDE10G0751 Ceratophyllum demersum HOM05D004408 ORTHO05D005486 2.5e-80 302.8 218 72.0
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 2.5e-80 302.8 220 73.2
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 2.5e-80 302.8 225 72.4
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 3.3e-80 302.4 220 73.2
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 3.3e-80 302.4 220 72.7
Sp2g20340 Schrenkiella parvula HOM05D004408 ORTHO05D005486 3.3e-80 302.4 220 72.3
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 4.3e-80 302.0 220 73.2
Thhalv10003510m.g Eutrema salsugineum HOM05D004408 ORTHO05D005486 5.6e-80 301.6 220 72.3
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 5.6e-80 301.6 224 73.2
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 7.3e-80 301.2 220 73.2
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 7.3e-80 301.2 220 73.6
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 9.6e-80 300.8 220 72.7
Carub.0006s2545 Capsella rubella HOM05D004408 ORTHO05D005486 9.6e-80 300.8 220 72.7
AL6G40140 Arabidopsis lyrata HOM05D004408 ORTHO05D005486 1.3e-79 300.4 220 73.2
A06p37770 Brassica napus HOM05D004408 ORTHO05D005486 2.1e-79 299.7 220 71.8
BraA06t26696Z Brassica rapa HOM05D004408 ORTHO05D005486 2.1e-79 299.7 220 71.8
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 2.8e-79 299.3 220 70.9
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 3.6e-79 298.9 220 71.8
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 6.2e-79 298.1 220 71.4
Solyc09g018370.4 Solanum lycopersicum HOM05D004408 ORTHO05D005486 6.2e-79 298.1 220 70.9
BcaNung04259 Brassica carinata HOM05D004408 ORTHO05D005486 8.1e-79 297.7 220 71.4
C07p40460 Brassica napus HOM05D004408 ORTHO05D005486 8.1e-79 297.7 220 71.4
BolC7t44581H Brassica oleracea HOM05D004408 ORTHO05D005486 8.1e-79 297.7 220 71.4
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 1.4e-78 297.0 220 72.7
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 1.8e-78 296.6 221 70.6
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 1.8e-78 296.6 220 71.8
AT5G27970 Arabidopsis thaliana HOM05D004408 ORTHO05D005486 2.4e-78 296.2 220 72.3
Nitab4.5_0000162g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 2.4e-78 296.2 220 70.0
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 3.1e-78 295.8 220 72.7
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 2.0e-77 293.1 221 71.0
ClCG03G016280 Citrullus lanatus HOM05D004408 ORTHO05D005486 4.5e-77 292.0 218 72.0
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 4.5e-77 292.0 220 71.8
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 7.6e-77 291.2 220 69.1
SMO169G0216 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 3.5e-74 282.3 232 65.1
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis HOM05D004408 ORTHO05D005486 6.0e-74 281.6 225 68.0
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 1.3e-71 273.9 220 66.8
Mapoly0167s0007 Marchantia polymorpha HOM05D004408 ORTHO05D005486 4.8e-71 271.9 229 65.1
Pp3c17_790 Physcomitrium patens HOM05D004408 ORTHO05D005486 5.1e-57 225.3 225 54.7
SHI08350 Sapria himalayana HOM05D004408 ORTHO05D005486 8.7e-57 224.6 221 57.0
CBR_g18881 Chara braunii HOM05D004408 ORTHO05D005486 3.7e-55 219.2 218 57.3
Lj7A478G81 Lonicera japonica HOM05D004408 ORTHO05D005486 3.8e-52 209.1 155 69.0
AUR62000963 Chenopodium quinoa HOM05D004408 ORTHO05D005486 6.5e-52 208.4 220 55.9
CBR_g23067 Chara braunii HOM05D004408 ORTHO05D005486 8.5e-52 208.0 224 52.7
Os01g0772700 Oryza sativa ssp. japonica HOM05D004408 ORTHO05D005486 1.8e-49 200.3 220 55.5
Nitab4.5_0000921g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 2.3e-49 199.9 137 73.7
Oeu060841.3 Olea europaea HOM05D004408 ORTHO05D005486 4.8e-47 192.2 146 65.8
Cpa.g.sc117.53 Carica papaya HOM05D004408 ORTHO05D005486 2.5e-35 153.3 132 64.4
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 1.0e-33 147.9 122 64.8
Haze_04314 Corylus avellana HOM05D004408 ORTHO05D005486 1.5e-24 117.5 70 87.1
PRCOL_00003187 Prasinoderma coloniale HOM05D004408 ORTHO05D005486 7.5e-24 115.2 270 34.8
Lj7A478T83 Lonicera japonica HOM05D004408 ORTHO05D005486 8.2e-23 111.7 67 85.1
Peaxi162Scf01040g00010 Petunia axillaris HOM05D004408 ORTHO05D005486 1.3e-20 104.4 67 79.1
Nitab4.5_0000921g0010 Nicotiana tabacum HOM05D004408 ORTHO05D005486 1.7e-20 104.0 74 70.3
arahy.Tifrunner.gnm1.ann1.L7F5GT Arachis hypogaea HOM05D004408 ORTHO05D005486 5.7e-16 89.0 53 83.0
Cre13.g575250 Chlamydomonas reinhardtii HOM05D004408 ORTHO05D005486 2.5e-11 73.6 279 26.2


User provided reference genes

Program Settings