Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-100 369.8 181 100.0
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.0e-50 203.0 124 79.0
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.0e-50 203.0 124 79.0
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.4e-48 196.8 124 74.2
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.1e-48 195.3 124 75.0
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 1.2e-47 193.7 124 73.4
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-47 193.4 132 70.5
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.0e-47 193.0 124 75.0
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.7e-47 192.6 124 75.0
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.7e-47 192.6 124 76.6
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-46 190.7 124 72.6
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.3e-46 189.5 124 72.6
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 8.6e-46 187.6 142 64.1
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.4e-40 168.3 105 77.1
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.0e-40 167.9 101 77.2
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 8.6e-38 161.0 106 70.8
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-37 160.6 103 72.8
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.6e-36 155.6 95 77.9
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-35 154.1 85 82.4
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-35 154.1 94 76.6
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.0e-34 149.8 93 77.4
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.9e-33 146.0 103 68.9
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.7e-28 128.6 81 75.3
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 6.4e-25 118.2 147 38.8
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 3.5e-23 112.5 119 42.9
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 6.0e-23 111.7 147 40.1
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 6.0e-23 111.7 119 42.9
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 1.0e-22 110.9 153 39.2
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 1.3e-22 110.5 119 45.4
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 1.7e-22 110.2 119 42.0
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-22 110.2 73 71.2
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 2.3e-22 109.8 119 45.4
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 8.6e-22 107.8 124 43.5
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 8.6e-22 107.8 119 42.0
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 2.5e-21 106.3 119 42.0
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 4.3e-21 105.5 122 42.6
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 4.3e-21 105.5 119 41.2
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 7.3e-21 104.8 119 42.9
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 7.3e-21 104.8 119 41.2
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 9.5e-21 104.4 124 40.3
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 9.5e-21 104.4 119 41.2
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 9.5e-21 104.4 119 42.0
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-20 104.0 65 78.5
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 1.2e-20 104.0 119 40.3
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 1.6e-20 103.6 119 41.2
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 1.6e-20 103.6 119 42.9
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 2.1e-20 103.2 119 40.3
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 2.1e-20 103.2 119 42.9
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 2.1e-20 103.2 119 42.9
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 2.1e-20 103.2 119 40.3
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 3.6e-20 102.4 122 40.2
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 3.6e-20 102.4 140 36.4
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 3.6e-20 102.4 116 42.2
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 3.6e-20 102.4 119 42.0
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 3.6e-20 102.4 119 42.0
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 4.7e-20 102.1 119 40.3
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 4.7e-20 102.1 116 41.4
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 6.2e-20 101.7 119 40.3
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 6.2e-20 101.7 126 38.9
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 6.2e-20 101.7 119 39.5
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 8.1e-20 101.3 143 37.1
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 8.1e-20 101.3 116 40.5
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 8.1e-20 101.3 119 40.3
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 8.1e-20 101.3 119 42.0
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 8.1e-20 101.3 119 38.7
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 1.1e-19 100.9 119 38.7
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 1.1e-19 100.9 119 40.3
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 1.4e-19 100.5 119 39.5
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 1.4e-19 100.5 119 41.2
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.8e-19 100.1 122 41.0
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 1.8e-19 100.1 122 41.0
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 1.8e-19 100.1 168 33.3
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 2.3e-19 99.8 123 40.7
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 2.3e-19 99.8 129 38.8
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.3e-19 99.8 122 40.2
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 2.3e-19 99.8 116 38.8
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 3.1e-19 99.4 129 39.5
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 4.0e-19 99.0 129 38.8
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 4.0e-19 99.0 129 38.8
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 4.0e-19 99.0 129 39.5
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 4.0e-19 99.0 129 39.5
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 4.0e-19 99.0 130 39.2
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 5.2e-19 98.6 123 39.0
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 6.8e-19 98.2 129 39.5
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 6.8e-19 98.2 129 39.5
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 6.8e-19 98.2 116 38.8
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 1.2e-18 97.4 129 38.8
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 1.2e-18 97.4 119 39.5
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 1.2e-18 97.4 139 37.4
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 1.2e-18 97.4 119 39.5
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 1.2e-18 97.4 119 38.7
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 1.2e-18 97.4 123 37.4
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.5e-18 97.1 119 41.2
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 1.5e-18 97.1 123 36.6
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 1.5e-18 97.1 119 38.7
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 2.0e-18 96.7 123 37.4
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 2.6e-18 96.3 119 37.8
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 2.6e-18 96.3 123 38.2
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 2.6e-18 96.3 119 37.0
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 3.4e-18 95.9 129 37.2
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 3.4e-18 95.9 119 37.8
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 3.4e-18 95.9 119 39.5
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 3.4e-18 95.9 122 38.5
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 4.4e-18 95.5 119 36.1
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 4.4e-18 95.5 119 37.0
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 4.4e-18 95.5 119 37.8
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 5.8e-18 95.1 129 35.7
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 5.8e-18 95.1 129 35.7
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 5.8e-18 95.1 129 38.8
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 5.8e-18 95.1 122 38.5
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 5.8e-18 95.1 122 38.5
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 7.5e-18 94.7 123 37.4
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 7.5e-18 94.7 129 35.7
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 9.9e-18 94.4 123 35.0
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 9.9e-18 94.4 119 36.1
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 9.9e-18 94.4 153 33.3
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 9.9e-18 94.4 119 35.3
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 1.3e-17 94.0 119 37.8
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 1.3e-17 94.0 119 37.8
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 1.3e-17 94.0 119 37.8
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 1.3e-17 94.0 156 32.1
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 1.3e-17 94.0 168 34.5
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 1.3e-17 94.0 119 36.1
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 2.9e-17 92.8 129 38.0
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 3.7e-17 92.4 129 37.2
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 3.7e-17 92.4 129 37.2
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 3.7e-17 92.4 143 35.7
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 3.7e-17 92.4 119 36.1
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 4.9e-17 92.0 119 37.0
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 6.4e-17 91.7 119 39.5
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.1e-16 90.9 119 39.5
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 1.4e-16 90.5 119 37.0
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 1.9e-16 90.1 119 38.7
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.9e-16 90.1 119 38.7
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 3.2e-16 89.4 133 36.1
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 5.4e-16 88.6 119 37.8
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 5.4e-16 88.6 160 31.9
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 7.1e-16 88.2 119 35.3
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 7.1e-16 88.2 119 35.3
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 9.2e-16 87.8 124 37.1
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.6e-15 87.0 119 37.0
SEGI_40445 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.3e-14 84.0 58 74.1
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.7e-14 83.6 126 34.1
SEGI_27452 Sequoiadendron giganteum HOM05D004028 ORTHO05D004844 2.3e-14 83.2 102 47.1
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 1.1e-13 80.9 90 40.0
SEGI_27028 Sequoiadendron giganteum HOM05D000737 ORTHO05D000581 1.9e-13 80.1 101 43.6
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 2.5e-13 79.7 117 32.5
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 2.5e-13 79.7 120 33.3
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-12 77.4 120 34.2
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 2.1e-12 76.6 76 44.7
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.1e-11 74.3 124 32.3
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 5.8e-10 68.6 64 43.8
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 7.6e-10 68.2 113 34.5
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 2.9e-09 66.2 117 31.6
SEGI_08427 Sequoiadendron giganteum HOM05D000061 ORTHO05D000050 1.0e-06 57.8 41 61.0


User provided reference genes

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