Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 3.2e-104 381.7 189 100.0
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 8.1e-47 191.0 137 65.7
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 1.8e-46 189.9 144 63.2
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.4e-46 189.5 138 64.5
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 4.0e-46 188.7 151 60.3
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 6.8e-46 188.0 137 64.2
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.8e-46 188.0 137 65.0
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.8e-46 188.0 137 64.2
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 1.5e-45 186.8 150 57.3
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 2.0e-45 186.4 149 61.1
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 2.6e-45 186.0 144 61.8
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 4.4e-45 185.3 142 59.9
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 4.4e-45 185.3 181 55.2
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.3e-44 183.7 142 62.7
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 1.7e-44 183.3 192 52.1
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 2.2e-44 183.0 181 51.4
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 2.9e-44 182.6 170 56.5
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 2.9e-44 182.6 132 62.1
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 4.9e-44 181.8 140 62.1
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 6.4e-44 181.4 143 58.7
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 6.4e-44 181.4 168 58.3
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 8.4e-44 181.0 157 57.3
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.1e-43 180.6 136 62.5
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 1.1e-43 180.6 150 57.3
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 1.4e-43 180.3 132 64.4
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.4e-43 180.3 141 59.6
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 1.4e-43 180.3 134 61.9
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 1.9e-43 179.9 157 57.3
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 1.9e-43 179.9 179 50.8
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.9e-43 179.9 166 55.4
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 2.4e-43 179.5 134 65.7
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 2.4e-43 179.5 183 53.0
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 2.4e-43 179.5 176 55.7
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.2e-43 178.7 147 61.2
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 5.4e-43 178.3 142 60.6
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 5.4e-43 178.3 142 57.0
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 7.1e-43 177.9 122 66.4
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 7.1e-43 177.9 195 50.3
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.2e-42 177.2 177 53.1
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 1.6e-42 176.8 158 55.1
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 1.6e-42 176.8 144 59.7
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 2.1e-42 176.4 123 65.0
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 2.1e-42 176.4 161 56.5
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 2.1e-42 176.4 127 63.0
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 2.1e-42 176.4 117 66.7
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.7e-42 176.0 159 55.3
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 3.5e-42 175.6 123 65.9
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 3.5e-42 175.6 144 59.7
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 3.5e-42 175.6 179 52.5
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 4.6e-42 175.3 123 65.0
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 4.6e-42 175.3 186 48.9
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.6e-42 175.3 144 59.7
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 4.6e-42 175.3 177 52.0
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 4.6e-42 175.3 123 65.0
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 6.0e-42 174.9 137 61.3
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 6.0e-42 174.9 137 61.3
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 6.0e-42 174.9 187 48.1
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 6.0e-42 174.9 138 60.9
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 6.0e-42 174.9 144 59.7
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 6.0e-42 174.9 123 63.4
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 6.0e-42 174.9 140 57.9
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 7.8e-42 174.5 127 62.2
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 7.8e-42 174.5 143 58.0
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 7.8e-42 174.5 117 67.5
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 7.8e-42 174.5 157 54.8
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 7.8e-42 174.5 171 52.0
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 1.0e-41 174.1 140 59.3
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 1.0e-41 174.1 183 50.3
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.3e-41 173.7 181 50.8
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 1.3e-41 173.7 137 60.6
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.3e-41 173.7 137 60.6
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.3e-41 173.7 184 50.5
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.7e-41 173.3 177 52.0
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 2.3e-41 172.9 137 59.9
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 2.3e-41 172.9 164 55.5
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 2.3e-41 172.9 158 53.2
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 3.0e-41 172.6 123 64.2
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 3.0e-41 172.6 123 61.0
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 3.9e-41 172.2 159 54.7
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 5.1e-41 171.8 132 62.1
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 6.6e-41 171.4 153 56.2
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 6.6e-41 171.4 189 48.1
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 6.6e-41 171.4 122 63.1
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 6.6e-41 171.4 122 63.1
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 8.7e-41 171.0 148 55.4
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 8.7e-41 171.0 137 59.9
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 8.7e-41 171.0 127 63.0
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 1.5e-40 170.2 138 56.5
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 1.9e-40 169.9 136 61.0
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 2.5e-40 169.5 122 62.3
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 5.6e-40 168.3 142 61.3
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 7.3e-40 167.9 144 54.2
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 2.8e-39 166.0 116 64.7
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 6.2e-39 164.9 117 66.7
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 6.2e-39 164.9 134 57.5
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 1.8e-38 163.3 111 64.0
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 2.4e-38 162.9 110 66.4
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.4e-38 162.9 145 55.9
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 9.0e-38 161.0 117 63.2
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 1.2e-37 160.6 188 47.9
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 1.5e-37 160.2 138 56.5
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 5.8e-37 158.3 166 48.2
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.3e-36 157.1 190 48.4
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 1.7e-36 156.8 166 49.4
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 2.9e-36 156.0 112 67.0
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 4.9e-36 155.2 112 64.3
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 8.4e-36 154.5 110 63.6
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.9e-35 153.3 127 59.1
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 3.2e-35 152.5 127 56.7
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 3.3e-32 142.5 106 65.1
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 7.3e-32 141.4 114 59.6
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 4.0e-30 135.6 90 65.6
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.5e-29 133.7 116 55.2
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 2.6e-29 132.9 100 67.0
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 4.5e-29 132.1 122 54.9
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 2.9e-28 129.4 92 63.0
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 3.8e-28 129.0 101 62.4
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 4.2e-27 125.6 89 64.0
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 1.6e-26 123.6 97 63.9
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 2.1e-26 123.2 97 59.8
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 4.6e-26 122.1 80 71.2
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 6.0e-26 121.7 103 59.2
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 2.3e-25 119.8 114 52.6
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 2.5e-24 116.3 73 71.2
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 3.1e-22 109.4 110 50.0
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 1.3e-20 104.0 83 55.4
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 2.5e-19 99.8 85 58.8
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 5.6e-16 88.6 110 42.7
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 1.3e-15 87.4 104 47.1
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 9.3e-11 71.2 48 68.8
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 1.3e-09 67.4 66 51.5


User provided reference genes

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