Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37736 Sequoiadendron giganteum HOM05D013917 ORTHO05D013169 4.5e-300 1033.9 542 100.0
Pp3c8_15110 Physcomitrium patens HOM05D013917 ORTHO05D013169 5.9e-18 96.7 229 30.1
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 1.1e-16 92.4 262 33.6
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 2.5e-16 91.3 322 28.9
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 2.5e-16 91.3 257 30.7
CBR_g38226 Chara braunii HOM05D000019 ORTHO05D000353 3.3e-16 90.9 80 50.0
Mapoly0010s0058 Marchantia polymorpha HOM05D013917 ORTHO05D013169 3.3e-16 90.9 78 56.4
Pp3c9_60 Physcomitrium patens HOM05D013917 ORTHO05D013169 3.3e-16 90.9 161 35.4
Pp3c13_24380 Physcomitrium patens HOM05D013917 ORTHO05D013169 3.6e-15 87.4 84 48.8
Pp3c14_20850 Physcomitrium patens HOM05D013917 ORTHO05D013169 8.0e-15 86.3 189 30.7
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.1e-14 85.9 249 32.9
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.8e-14 85.1 264 34.1
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 5.2e-14 83.6 348 27.3
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 5.2e-14 83.6 297 28.3
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 7.5e-13 79.7 250 29.6
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 4.1e-11 73.9 253 30.0
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 9.2e-11 72.8 347 26.8
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 1.2e-10 72.4 343 27.1
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 2.0e-10 71.6 255 28.6
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 2.0e-10 71.6 243 25.9
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 2.0e-10 71.6 250 26.8
AagrBONN_evm.TU.Sc2ySwM_344.1797 Anthoceros agrestis HOM05D013917 ORTHO05D013169 3.5e-10 70.9 79 44.3
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 4.6e-10 70.5 256 26.6
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 4.6e-10 70.5 243 25.5
Mapoly0010s0053 Marchantia polymorpha HOM05D013917 ORTHO05D013169 4.6e-10 70.5 163 33.7
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 6.0e-10 70.1 243 25.5
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 7.8e-10 69.7 248 27.8
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 1.3e-09 68.9 243 27.2
Pp3c22_4700 Physcomitrium patens HOM05D022476 ORTHO05D013169 3.0e-09 67.8 104 35.6
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 3.9e-09 67.4 252 27.4
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 3.9e-09 67.4 277 26.0
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 5.0e-09 67.0 252 27.4
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 6.6e-09 66.6 264 23.5
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 8.6e-09 66.2 243 28.0
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 1.1e-08 65.9 334 26.3
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 1.9e-08 65.1 263 24.7
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 2.5e-08 64.7 348 25.3
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 2.5e-08 64.7 257 27.2
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 2.5e-08 64.7 305 22.6
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 4.3e-08 63.9 252 27.0
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 4.3e-08 63.9 247 28.3
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 7.3e-08 63.2 257 27.2
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 1.2e-07 62.4 246 26.8
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.1e-07 61.6 262 25.6
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.1e-07 61.6 262 25.6
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.1e-07 61.6 262 25.6
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 2.8e-07 61.2 256 27.3
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 2.8e-07 61.2 267 26.6
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 3.6e-07 60.8 346 25.7
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 4.7e-07 60.5 248 27.0
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 4.7e-07 60.5 248 27.0
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 6.2e-07 60.1 259 27.0
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 8.1e-07 59.7 315 26.3
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 8.1e-07 59.7 326 23.6
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 1.1e-06 59.3 255 27.5
Pp3c22_6940 Physcomitrium patens HOM05D022476 ORTHO05D013169 1.1e-06 59.3 69 42.0
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 1.4e-06 58.9 257 29.6
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 1.8e-06 58.5 253 24.9
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 1.8e-06 58.5 244 27.0
Pp3c19_9120 Physcomitrium patens HOM05D022476 ORTHO05D308281 1.8e-06 58.5 68 41.2
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 2.3e-06 58.2 274 26.3
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 2.3e-06 58.2 294 26.2
Pp3c19_7390 Physcomitrium patens HOM05D022476 ORTHO05D013169 6.8e-06 56.6 231 25.1
Pp3c8_12620 Physcomitrium patens HOM05D022476 ORTHO05D013169 6.8e-06 56.6 181 28.2


User provided reference genes

Program Settings