Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.9e-113 412.5 214 100.0
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.9e-113 412.5 214 100.0
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 7.4e-73 277.7 208 64.9
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 3.7e-72 275.4 190 67.9
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 5.3e-71 271.6 193 68.9
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 1.7e-69 266.5 204 62.7
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 1.7e-69 266.5 199 65.8
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 1.7e-69 266.5 206 64.1
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 2.5e-68 262.7 208 62.5
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 9.4e-68 260.8 195 63.6
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 2.1e-67 259.6 197 65.0
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 2.1e-67 259.6 208 61.5
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 3.6e-67 258.8 204 61.8
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 3.6e-67 258.8 207 61.4
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 6.1e-67 258.1 204 64.2
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 8.0e-67 257.7 195 63.1
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.4e-66 256.9 197 62.9
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 1.4e-66 256.9 195 62.1
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 1.8e-66 256.5 196 63.3
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 1.8e-66 256.5 206 63.6
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 1.8e-66 256.5 195 62.6
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 2.3e-66 256.1 206 61.2
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 2.3e-66 256.1 202 60.9
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 2.3e-66 256.1 204 61.3
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 3.0e-66 255.8 204 61.8
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 3.0e-66 255.8 208 59.6
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 4.0e-66 255.4 208 61.1
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 5.2e-66 255.0 196 62.2
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 5.2e-66 255.0 207 61.4
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 6.7e-66 254.6 195 62.1
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 6.7e-66 254.6 195 62.1
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 8.8e-66 254.2 207 61.4
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 8.8e-66 254.2 206 63.1
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 1.1e-65 253.8 196 61.7
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.1e-65 253.8 196 61.7
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 1.1e-65 253.8 195 63.6
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 1.5e-65 253.4 195 62.1
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 1.5e-65 253.4 201 60.7
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 2.0e-65 253.1 197 62.9
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 2.6e-65 252.7 208 60.6
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 2.6e-65 252.7 196 62.8
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.3e-65 252.3 196 61.2
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 4.4e-65 251.9 197 61.4
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 4.4e-65 251.9 208 58.2
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 4.4e-65 251.9 206 59.2
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 4.4e-65 251.9 206 62.6
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 4.4e-65 251.9 195 62.1
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 5.7e-65 251.5 195 63.6
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 7.5e-65 251.1 195 62.1
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 7.5e-65 251.1 203 60.6
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 9.7e-65 250.8 204 60.3
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 1.3e-64 250.4 208 58.7
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 1.3e-64 250.4 197 62.4
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 1.3e-64 250.4 200 61.0
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 1.7e-64 250.0 204 59.3
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 1.7e-64 250.0 206 62.1
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 2.8e-64 249.2 197 61.9
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 3.7e-64 248.8 207 60.4
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 3.7e-64 248.8 208 60.6
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 4.8e-64 248.4 202 60.9
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 6.3e-64 248.1 208 58.2
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 8.2e-64 247.7 203 62.6
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 8.2e-64 247.7 203 62.6
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 8.2e-64 247.7 195 60.0
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 8.2e-64 247.7 206 61.2
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.1e-63 247.3 197 59.9
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 1.1e-63 247.3 207 59.4
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 1.4e-63 246.9 203 63.1
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 1.4e-63 246.9 195 61.0
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 1.8e-63 246.5 203 61.6
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.8e-63 246.5 203 61.6
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 2.4e-63 246.1 195 62.1
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 3.1e-63 245.7 203 61.6
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 4.1e-63 245.4 207 59.4
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.1e-63 245.4 207 58.5
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 5.3e-63 245.0 203 59.1
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 7.0e-63 244.6 197 62.9
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 2.0e-62 243.0 203 62.1
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 1.0e-61 240.7 199 59.3
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 2.9e-61 239.2 203 58.6
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 1.1e-60 237.3 203 57.6
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 1.5e-60 236.9 203 61.1
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 7.2e-60 234.6 203 61.1
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 7.2e-60 234.6 203 58.6
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 1.2e-59 233.8 203 61.1
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 2.7e-59 232.6 203 60.1
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 3.6e-59 232.3 198 59.6
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 8.0e-59 231.1 202 56.9
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 2.6e-57 226.1 205 56.1
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 4.8e-56 221.9 208 52.9
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 6.3e-56 221.5 208 52.4
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 1.6e-54 216.9 194 57.2
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 5.0e-53 211.8 198 53.0
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 4.4e-49 198.7 195 52.3
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 2.4e-47 193.0 195 50.8
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 7.0e-47 191.4 200 52.0
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 2.7e-46 189.5 180 57.8
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 1.0e-45 187.6 150 58.7
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 1.8e-42 176.8 124 63.7
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 5.2e-42 175.3 198 47.5
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 8.3e-40 167.9 123 62.6
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.0e-21 107.8 88 58.0
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 1.0e-21 107.8 86 57.0
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 1.6e-14 84.0 71 53.5


User provided reference genes

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