Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37641 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 2.7e-100 368.6 179 100.0
SEGI_39055 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 1.1e-61 240.4 414 39.4
SEGI_19892 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 1.3e-46 190.3 412 33.5
SEGI_39574 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 5.0e-46 188.3 412 33.3
SEGI_36004 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 2.6e-31 139.4 126 57.1
SEGI_19583 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 1.9e-29 133.3 80 67.5
ECA248G1215 Erigeron canadensis HOM05D005027 ORTHO05D005978 5.5e-29 131.7 81 67.9
SEGI_00216 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 9.4e-29 131.0 80 65.0
MD08G1113800 Malus domestica HOM05D005027 ORTHO05D005978 1.0e-27 127.5 81 65.4
PGSC0003DMG400002234 Solanum tuberosum HOM05D005027 ORTHO05D005978 1.4e-27 127.1 83 63.9
HanXRQChr00c0025g0571121 Helianthus annuus HOM05D005027 ORTHO05D005978 1.8e-27 126.7 80 66.2
Lsat_1_v5_gn_1_46661 Lactuca sativa HOM05D005027 ORTHO05D005978 1.8e-27 126.7 81 64.2
Atru.chr7.2090 Acer truncatum HOM05D005027 ORTHO05D005978 2.3e-27 126.3 80 66.2
Solyc08g066650.3 Solanum lycopersicum HOM05D005027 ORTHO05D005978 2.3e-27 126.3 83 63.9
Sopen08g020520 Solanum pennellii HOM05D005027 ORTHO05D005978 2.3e-27 126.3 83 63.9
MD15G1093500 Malus domestica HOM05D005027 ORTHO05D005978 3.9e-27 125.6 80 65.0
EL10Ac2g04019 Beta vulgaris HOM05D005027 ORTHO05D005978 5.2e-27 125.2 81 65.4
COL.COLO4_20969 Corchorus olitorius HOM05D005027 ORTHO05D005978 5.2e-27 125.2 80 65.0
Peaxi162Scf00227g00714 Petunia axillaris HOM05D005027 ORTHO05D005978 5.2e-27 125.2 80 65.0
Rhsim02G0178400 Rhododendron simsii HOM05D005027 ORTHO05D005978 5.2e-27 125.2 80 67.5
unitig_46.g18188 Utricularia gibba HOM05D005027 ORTHO05D005978 6.7e-27 124.8 81 67.9
Aqoxy1G03410 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 8.8e-27 124.4 80 63.8
Aqoxy3G01972 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 8.8e-27 124.4 80 63.8
Aqoxy7G01483 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 8.8e-27 124.4 80 66.2
Gohir.D06G092400 Gossypium hirsutum HOM05D005027 ORTHO05D005978 8.8e-27 124.4 80 63.8
Gorai.010G106400 Gossypium raimondii HOM05D005027 ORTHO05D005978 8.8e-27 124.4 80 63.8
Nitab4.5_0001894g0040 Nicotiana tabacum HOM05D005027 ORTHO05D005978 8.8e-27 124.4 80 65.0
Sed0014536 Sechium edule HOM05D005027 ORTHO05D005978 8.8e-27 124.4 80 67.5
AUR62009284 Chenopodium quinoa HOM05D005027 ORTHO05D005978 1.1e-26 124.0 80 66.2
Os01g0566500 Oryza sativa ssp. japonica HOM05D005027 ORTHO05D005978 1.5e-26 123.6 81 66.7
Prupe.1G448400 Prunus persica HOM05D005027 ORTHO05D005978 1.5e-26 123.6 81 64.2
CANSAT25G1983 Cannabis sativa HOM05D005027 ORTHO05D005978 2.0e-26 123.2 81 63.0
FvH4_2g35610 Fragaria vesca HOM05D005027 ORTHO05D005978 2.0e-26 123.2 80 63.8
FAN15G3195 Fragaria x ananassa HOM05D005027 ORTHO05D005978 2.0e-26 123.2 80 63.8
FAN20G3026 Fragaria x ananassa HOM05D005027 ORTHO05D005978 2.0e-26 123.2 80 63.8
FAN27G2638 Fragaria x ananassa HOM05D005027 ORTHO05D005978 2.0e-26 123.2 80 63.8
TAR624G0014 Trochodendron aralioides HOM05D005027 ORTHO05D005978 2.0e-26 123.2 80 63.8
Cc08_g09540 Coffea canephora HOM05D005027 ORTHO05D005978 2.6e-26 122.9 80 63.8
Gohir.A06G092800 Gossypium hirsutum HOM05D005027 ORTHO05D005978 2.6e-26 122.9 80 62.5
Manes.16G075700 Manihot esculenta HOM05D005027 ORTHO05D005978 2.6e-26 122.9 80 63.8
Potri.006G238500 Populus trichocarpa HOM05D005027 ORTHO05D005978 2.6e-26 122.9 80 63.8
Sabra06G0186600 Salix brachista HOM05D005027 ORTHO05D005978 2.6e-26 122.9 80 63.8
HPP92_022983 Vanilla planifolia HOM05D005027 ORTHO05D005978 2.6e-26 122.9 83 63.9
ECA233G5490 Erigeron canadensis HOM05D005027 ORTHO05D005978 3.3e-26 122.5 80 62.5
Nitab4.5_0003794g0080 Nicotiana tabacum HOM05D005027 ORTHO05D005978 3.3e-26 122.5 79 64.6
Aqoxy7G01485 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 4.4e-26 122.1 80 63.8
Migut.A00205 Erythranthe guttata HOM05D005027 ORTHO05D005978 4.4e-26 122.1 80 65.0
Medtr3g109610 Medicago truncatula HOM05D005027 ORTHO05D005978 4.4e-26 122.1 80 63.8
Psat0s1928g0120 Pisum sativum HOM05D005027 ORTHO05D005978 4.4e-26 122.1 80 63.8
Potri.018G044100 Populus trichocarpa HOM05D005027 ORTHO05D005978 4.4e-26 122.1 80 62.5
Cc08_g09530 Coffea canephora HOM05D005027 ORTHO05D005978 5.7e-26 121.7 80 65.0
MELO3C011142.2 Cucumis melo HOM05D005027 ORTHO05D005978 5.7e-26 121.7 80 63.8
ATR0723G015 Amborella trichopoda HOM05D005027 ORTHO05D005978 7.4e-26 121.3 80 61.2
CSS0030796 Camellia sinensis var. sinensis HOM05D005027 ORTHO05D005978 7.4e-26 121.3 80 65.0
Ciclev10010609m.g Citrus clementina HOM05D005027 ORTHO05D005978 7.4e-26 121.3 80 63.8
MBI04_g45212_MAGBIO Magnolia biondii HOM05D005027 ORTHO05D005978 7.4e-26 121.3 80 62.5
RcHm_v2.0_Chr6g0306201 Rosa chinensis HOM05D005027 ORTHO05D005978 7.4e-26 121.3 80 61.2
Thecc.09G045100 Theobroma cacao HOM05D005027 ORTHO05D005978 7.4e-26 121.3 80 62.5
CiPaw.08G025700 Carya illinoinensis HOM05D005027 ORTHO05D005978 9.7e-26 120.9 80 62.5
DCAR_004470 Daucus carota HOM05D005027 ORTHO05D005978 9.7e-26 120.9 80 61.2
Glyma.06G085800 Glycine max HOM05D005027 ORTHO05D005978 9.7e-26 120.9 80 63.8
Gohir.D07G025900 Gossypium hirsutum HOM05D005027 ORTHO05D005978 9.7e-26 120.9 80 61.2
Gorai.001G027000 Gossypium raimondii HOM05D005027 ORTHO05D005978 9.7e-26 120.9 80 61.2
HanXRQChr02g0050571 Helianthus annuus HOM05D005027 ORTHO05D005978 9.7e-26 120.9 80 61.2
Nn8g39130 Nelumbo nucifera HOM05D005027 ORTHO05D005978 9.7e-26 120.9 80 62.5
Oeu038805.1 Olea europaea HOM05D005027 ORTHO05D005978 9.7e-26 120.9 80 63.8
ClCG08G012240 Citrullus lanatus HOM05D005027 ORTHO05D005978 1.3e-25 120.6 80 62.5
CsaV3_2G030870 Cucumis sativus L. HOM05D005027 ORTHO05D005978 1.3e-25 120.6 80 63.8
Duzib168G0183 Durio zibethinus HOM05D005027 ORTHO05D005978 1.3e-25 120.6 80 61.2
Eucgr.C02930 Eucalyptus grandis HOM05D005027 ORTHO05D005978 1.3e-25 120.6 80 61.2
TPR.G15106 Trifolium pratense HOM05D005027 ORTHO05D005978 1.3e-25 120.6 80 62.5
CiPaw.07G204400 Carya illinoinensis HOM05D005027 ORTHO05D005978 1.7e-25 120.2 80 62.5
SalBow4G2697 Salvia bowleyana HOM05D005027 ORTHO05D005978 1.7e-25 120.2 81 60.5
Actinidia13335 Actinidia chinensis HOM05D005027 ORTHO05D005978 2.2e-25 119.8 80 61.2
Ca_15593_v3 Cicer arietinum L. HOM05D005027 ORTHO05D005978 2.2e-25 119.8 80 62.5
Haze_21886 Corylus avellana HOM05D005027 ORTHO05D005978 2.2e-25 119.8 80 61.2
Lj8A581T28 Lonicera japonica HOM05D005027 ORTHO05D005978 2.2e-25 119.8 80 63.8
Medtr7g063800 Medicago truncatula HOM05D005027 ORTHO05D005978 2.2e-25 119.8 80 62.5
Phvul.009G109700 Phaseolus vulgaris HOM05D005027 ORTHO05D005978 2.2e-25 119.8 80 60.0
Gohir.A07G022500 Gossypium hirsutum HOM05D005027 ORTHO05D005978 2.8e-25 119.4 80 60.0
Lsat_1_v5_gn_6_23181 Lactuca sativa HOM05D005027 ORTHO05D005978 2.8e-25 119.4 80 61.2
Lj1g0019414 Lotus japonicus HOM05D005027 ORTHO05D005978 3.7e-25 119.0 80 60.0
PGR044G2243 Punica granatum HOM05D005027 ORTHO05D005978 3.7e-25 119.0 80 61.2
TWI34G1114 Tripterygium wilfordii HOM05D005027 ORTHO05D005978 3.7e-25 119.0 81 59.3
GSVIVG01035626001 Vitis vinifera HOM05D005027 ORTHO05D005978 3.7e-25 119.0 80 62.5
Glyma.04G084100 Glycine max HOM05D005027 ORTHO05D005978 4.8e-25 118.6 80 61.2
ATR0705G159 Amborella trichopoda HOM05D005027 ORTHO05D005978 6.3e-25 118.2 80 60.0
CDE02G4197 Ceratophyllum demersum HOM05D005027 ORTHO05D005978 6.3e-25 118.2 80 61.2
Oeu030720.1 Olea europaea HOM05D005027 ORTHO05D005978 6.3e-25 118.2 80 63.8
AUR62039699 Chenopodium quinoa HOM05D005027 ORTHO05D005978 8.2e-25 117.9 80 62.5
AUR62044294 Chenopodium quinoa HOM05D005027 ORTHO05D005978 8.2e-25 117.9 80 62.5
vmacro11059 Vaccinium macrocarpon HOM05D005027 ORTHO05D005978 8.2e-25 117.9 80 62.5
VMungo1309G1842 Vigna mungo HOM05D005027 ORTHO05D005978 8.2e-25 117.9 80 61.2
Cfa013364 Carpinus fangiana HOM05D005027 ORTHO05D005978 1.1e-24 117.5 80 58.8
AagrBONN_evm.TU.Sc2ySwM_344.4691 Anthoceros agrestis HOM05D005027 ORTHO05D005978 1.4e-24 117.1 81 61.7
CDE08G1231 Ceratophyllum demersum HOM05D005027 ORTHO05D005978 1.4e-24 117.1 80 61.2
QL12p041392 Quercus lobata HOM05D005027 ORTHO05D005978 1.4e-24 117.1 80 60.0
Sc09g0009280 Simmondsia chinensis HOM05D005027 ORTHO05D005978 1.4e-24 117.1 80 62.5
arahy.Tifrunner.gnm1.ann1.4KPL6Q Arachis hypogaea HOM05D005027 ORTHO05D005978 1.8e-24 116.7 80 60.0
Eucgr.C02932 Eucalyptus grandis HOM05D005027 ORTHO05D005978 1.8e-24 116.7 80 60.0
PSO210G1252 Papaver somniferum HOM05D005027 ORTHO05D005978 2.4e-24 116.3 82 59.8
TWI63G0812 Tripterygium wilfordii HOM05D005027 ORTHO05D005978 2.4e-24 116.3 80 60.0
Aqoxy7G01484 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 4.1e-24 115.5 79 60.8
arahy.Tifrunner.gnm1.ann1.MD1Q75 Arachis hypogaea HOM05D005027 ORTHO05D005978 4.1e-24 115.5 80 60.0
Cpa.g.c24654.3 Carica papaya HOM05D005027 ORTHO05D005978 4.1e-24 115.5 80 58.8
Os01g0746400 Oryza sativa ssp. japonica HOM05D005027 ORTHO05D005978 4.1e-24 115.5 80 58.8
AT4G32810 Arabidopsis thaliana HOM05D005027 ORTHO05D005978 5.3e-24 115.2 80 61.2
Thhalv10024788m.g Eutrema salsugineum HOM05D005027 ORTHO05D005978 5.3e-24 115.2 80 60.0
CARHR240800 Cardamine hirsuta HOM05D005027 ORTHO05D005978 7.0e-24 114.8 81 60.5
Aqoxy1G03982 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 9.1e-24 114.4 80 58.8
AL7G18920 Arabidopsis lyrata HOM05D005027 ORTHO05D005978 9.1e-24 114.4 80 61.2
Lalb_Chr08g0243061 Lupinus albus HOM05D005027 ORTHO05D005978 9.1e-24 114.4 80 58.8
Aa31sc497G20 Aethionema arabicum HOM05D005027 ORTHO05D005978 1.2e-23 114.0 80 60.0
Cpa.g.c24654.4 Carica papaya HOM05D005027 ORTHO05D005978 1.6e-23 113.6 80 57.5
Zm00001eb153000 Zea mays HOM05D005027 ORTHO05D005978 2.0e-23 113.2 80 60.0
BcaC09g52077 Brassica carinata HOM05D005027 ORTHO05D005978 3.5e-23 112.5 80 60.0
A01p05480 Brassica napus HOM05D005027 ORTHO05D005978 3.5e-23 112.5 80 60.0
C01p06080 Brassica napus HOM05D005027 ORTHO05D005978 3.5e-23 112.5 80 60.0
BolC1t00601H Brassica oleracea HOM05D005027 ORTHO05D005978 3.5e-23 112.5 80 60.0
BraA01t00521Z Brassica rapa HOM05D005027 ORTHO05D005978 3.5e-23 112.5 80 60.0
Pp3c6_21520 Physcomitrium patens HOM05D005027 ORTHO05D005978 3.5e-23 112.5 80 57.5
Atru.chr3.767 Acer truncatum HOM05D005027 ORTHO05D005978 4.5e-23 112.1 80 57.5
Sp7g30580 Schrenkiella parvula HOM05D005027 ORTHO05D005978 1.7e-22 110.2 80 58.8
Ciclev10008050m.g Citrus clementina HOM05D005027 ORTHO05D005978 6.5e-22 108.2 80 55.0
Ah.16g105780 Amaranthus hybridus HOM05D005027 ORTHO05D005978 8.5e-22 107.8 82 61.0
Carub.0007s0768 Capsella rubella HOM05D005027 ORTHO05D005978 8.5e-22 107.8 80 58.8
SMO147G0156 Selaginella moellendorffii HOM05D005027 ORTHO05D005978 9.4e-21 104.4 79 54.4
SGA_v2.0_scaffold103G29990 Striga asiatica HOM05D005027 ORTHO05D005978 1.6e-12 77.0 65 53.8
CAN.G552.8 Capsicum annuum HOM05D005027 ORTHO05D005978 1.0e-11 74.3 45 66.7
Cre02.g073900 Chlamydomonas reinhardtii HOM05D005027 ORTHO05D005978 1.2e-10 70.9 78 39.7
Cre02.g073950 Chlamydomonas reinhardtii HOM05D005027 ORTHO05D005978 1.2e-10 70.9 78 39.7
CAN.G400.1 Capsicum annuum HOM05D005027 ORTHO05D005978 4.4e-10 68.9 61 45.9
PRCOL_00003714 Prasinoderma coloniale HOM05D005027 ORTHO05D005978 5.7e-10 68.6 76 39.5
Cre08.g365851 Chlamydomonas reinhardtii HOM05D005027 ORTHO05D005978 1.4e-08 63.9 79 36.7
Cc03_g07270 Coffea canephora HOM05D000433 ORTHO05D000443 2.0e-07 60.1 75 40.0
HanXRQChr02g0059541 Helianthus annuus HOM05D000433 ORTHO05D000443 2.3e-06 56.6 81 38.3
Sed0004878 Sechium edule HOM05D000433 ORTHO05D000443 2.9e-06 56.2 72 37.5
Ca_25031_v3 Cicer arietinum L. HOM05D000433 ORTHO05D000443 8.6e-06 54.7 72 40.3
Nitab4.5_0001066g0060 Nicotiana tabacum HOM05D000433 ORTHO05D000443 8.6e-06 54.7 75 33.3
Peaxi162Scf00536g00084 Petunia axillaris HOM05D000433 ORTHO05D000443 8.6e-06 54.7 76 34.2


User provided reference genes

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