Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37606 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.6e-53 211.8 111 100.0
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.6e-10 69.7 72 58.3
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 1.6e-10 69.7 59 61.0
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 1.6e-10 69.7 56 51.8
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 2.1e-10 69.3 43 69.8
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 2.1e-10 69.3 58 53.4
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 2.7e-10 68.9 66 48.5
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 4.6e-10 68.2 44 68.2
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 6.1e-10 67.8 62 54.8
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 7.9e-10 67.4 58 58.6
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.0e-09 67.0 61 50.8
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 1.4e-09 66.6 62 50.0
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.8e-09 66.2 47 59.6
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 2.3e-09 65.9 60 50.0
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 2.3e-09 65.9 44 61.4
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 2.3e-09 65.9 57 54.4
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 2.3e-09 65.9 66 47.0
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 2.3e-09 65.9 63 50.8
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 3.0e-09 65.5 58 53.4
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 3.9e-09 65.1 56 50.0
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 3.9e-09 65.1 59 57.6
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 3.9e-09 65.1 59 57.6
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 3.9e-09 65.1 46 58.7
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.1e-09 64.7 56 50.0
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 5.1e-09 64.7 57 52.6
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 6.7e-09 64.3 42 64.3
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 6.7e-09 64.3 56 58.9
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 6.7e-09 64.3 48 56.2
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 6.7e-09 64.3 56 50.0
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 6.7e-09 64.3 63 49.2
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 6.7e-09 64.3 48 60.4
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 8.8e-09 63.9 58 50.0
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 8.8e-09 63.9 107 35.5
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 8.8e-09 63.9 64 53.1
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 8.8e-09 63.9 55 58.2
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 8.8e-09 63.9 63 49.2
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 1.1e-08 63.5 68 51.5
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 1.1e-08 63.5 74 44.6
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.1e-08 63.5 63 49.2
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 1.1e-08 63.5 43 62.8
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 1.1e-08 63.5 56 48.2
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 1.1e-08 63.5 63 47.6
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 1.5e-08 63.2 66 43.9
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 1.5e-08 63.2 43 60.5
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.5e-08 63.2 56 48.2
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 1.5e-08 63.2 55 54.5
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 1.9e-08 62.8 52 51.9
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.9e-08 62.8 52 51.9
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.9e-08 62.8 57 52.6
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 3.3e-08 62.0 56 51.8
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 3.3e-08 62.0 43 60.5
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 3.3e-08 62.0 56 51.8
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 3.3e-08 62.0 56 50.0
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 4.3e-08 61.6 57 59.6
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 4.3e-08 61.6 57 50.9
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 4.3e-08 61.6 52 50.0
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 4.3e-08 61.6 52 51.9
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 4.3e-08 61.6 43 60.5
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 5.7e-08 61.2 52 50.0
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 7.4e-08 60.8 39 64.1
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 7.4e-08 60.8 52 50.0
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 7.4e-08 60.8 49 53.1
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 7.4e-08 60.8 57 50.9
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.4e-08 60.8 43 60.5
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.4e-08 60.8 43 60.5
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 7.4e-08 60.8 53 50.9
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 7.4e-08 60.8 43 55.8
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 9.7e-08 60.5 63 47.6
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 9.7e-08 60.5 43 58.1
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 1.3e-07 60.1 48 52.1
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.3e-07 60.1 43 55.8
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 1.7e-07 59.7 38 63.2
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 1.7e-07 59.7 56 48.2
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 1.7e-07 59.7 53 49.1
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 2.2e-07 59.3 57 47.4
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.2e-07 59.3 54 50.0
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 2.2e-07 59.3 39 61.5
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 2.8e-07 58.9 57 47.4
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 3.7e-07 58.5 43 53.5
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 3.7e-07 58.5 39 61.5
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 4.8e-07 58.2 39 59.0
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 4.8e-07 58.2 57 47.4
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.8e-07 58.2 39 64.1
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 1.1e-06 57.0 54 51.9
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 1.1e-06 57.0 63 50.8
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 1.1e-06 57.0 65 40.0
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 1.8e-06 56.2 48 52.1
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 1.8e-06 56.2 48 52.1
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 4.1e-06 55.1 52 53.8
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.1e-06 55.1 50 48.0
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 4.1e-06 55.1 57 45.6
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 4.1e-06 55.1 56 42.9
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 4.1e-06 55.1 56 42.9
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 4.1e-06 55.1 43 53.5
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.3e-06 54.7 42 54.8
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 5.3e-06 54.7 64 42.2
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 5.3e-06 54.7 38 63.2


User provided reference genes

Program Settings