Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 2.5e-116 422.2 216 100.0
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 6.0e-14 82.0 185 30.8
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 3.9e-13 79.3 212 32.1
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 8.7e-13 78.2 199 32.2
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 3.3e-12 76.3 178 32.0
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 4.3e-12 75.9 169 33.1
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 7.4e-12 75.1 185 30.8
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 1.3e-11 74.3 184 32.1
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 1.3e-11 74.3 172 33.7
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 1.6e-11 73.9 190 29.5
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 3.7e-11 72.8 157 36.3
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 3.7e-11 72.8 177 33.9
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 8.2e-11 71.6 158 32.9
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.1e-10 71.2 165 30.9
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 1.1e-10 71.2 209 28.2
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 1.1e-10 71.2 213 28.2
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 1.8e-10 70.5 197 30.5
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 1.8e-10 70.5 164 31.7
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.8e-10 70.5 214 30.4
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 3.1e-10 69.7 197 30.5
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 3.1e-10 69.7 165 31.5
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 6.9e-10 68.6 185 31.9
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 9.0e-10 68.2 178 29.2
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 9.0e-10 68.2 178 28.1
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 9.0e-10 68.2 192 26.0
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.2e-09 67.8 176 31.8
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 1.2e-09 67.8 171 28.7
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 1.2e-09 67.8 167 30.5
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 1.5e-09 67.4 163 28.2
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 1.5e-09 67.4 188 30.9
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 1.5e-09 67.4 175 30.3
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 1.5e-09 67.4 152 32.9
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 2.0e-09 67.0 170 31.2
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 2.6e-09 66.6 224 27.2
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 3.4e-09 66.2 207 28.5
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 3.4e-09 66.2 218 24.8
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 3.4e-09 66.2 223 28.3
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 4.5e-09 65.9 184 28.8
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 5.9e-09 65.5 193 28.0
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 5.9e-09 65.5 189 28.6
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 7.6e-09 65.1 181 29.8
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 7.6e-09 65.1 157 29.3
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 7.6e-09 65.1 175 30.9
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 1.0e-08 64.7 201 31.8
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 1.3e-08 64.3 205 27.8
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.3e-08 64.3 184 25.5
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 1.3e-08 64.3 195 28.7
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 1.7e-08 63.9 168 33.9
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 1.7e-08 63.9 169 30.8
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 1.7e-08 63.9 197 29.9
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 2.2e-08 63.5 165 29.1
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 2.2e-08 63.5 210 26.2
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 2.2e-08 63.5 219 31.1
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 2.9e-08 63.2 174 28.7
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 2.9e-08 63.2 170 31.8
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 2.9e-08 63.2 159 29.6
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 3.8e-08 62.8 170 27.1
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 3.8e-08 62.8 178 27.5
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.8e-08 62.8 176 29.0
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 5.0e-08 62.4 191 28.3
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 6.5e-08 62.0 178 27.0
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 6.5e-08 62.0 201 25.9
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 6.5e-08 62.0 151 33.1
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 8.5e-08 61.6 194 27.3
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 8.5e-08 61.6 194 27.3
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 8.5e-08 61.6 189 30.2
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 8.5e-08 61.6 175 30.3
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 1.1e-07 61.2 186 30.6
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 1.1e-07 61.2 179 28.5
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 1.1e-07 61.2 212 27.4
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 1.4e-07 60.8 177 29.9
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.4e-07 60.8 179 29.6
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 1.9e-07 60.5 194 25.8
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 1.9e-07 60.5 160 28.1
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 2.5e-07 60.1 151 29.8
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 2.5e-07 60.1 197 24.4
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 2.5e-07 60.1 141 31.9
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 2.5e-07 60.1 192 28.1
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.2e-07 59.7 179 29.6
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 5.5e-07 58.9 177 30.5
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 5.5e-07 58.9 201 25.4
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 7.2e-07 58.5 183 28.4
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 7.2e-07 58.5 174 28.2
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 7.2e-07 58.5 165 29.7
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 9.3e-07 58.2 185 29.7
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 1.2e-06 57.8 256 24.6
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 1.2e-06 57.8 176 28.4
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 2.1e-06 57.0 192 28.1
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 3.6e-06 56.2 182 29.1
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 4.6e-06 55.8 184 27.2
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 4.6e-06 55.8 164 30.5
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 6.1e-06 55.5 175 29.7
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 6.1e-06 55.5 180 27.2
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 7.9e-06 55.1 174 28.2
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 7.9e-06 55.1 170 28.8


User provided reference genes

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