Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.4e-78 296.2 152 100.0
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 6.8e-28 127.9 82 74.4
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 6.8e-28 127.9 85 70.6
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 1.2e-27 127.1 84 73.8
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 2.0e-27 126.3 82 73.2
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 3.4e-27 125.6 82 78.0
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 3.4e-27 125.6 82 73.2
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 3.4e-27 125.6 142 52.1
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 4.4e-27 125.2 87 73.6
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 4.4e-27 125.2 82 73.2
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 4.4e-27 125.2 82 73.2
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 4.4e-27 125.2 82 74.4
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 5.7e-27 124.8 137 51.1
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 7.5e-27 124.4 81 72.8
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 7.5e-27 124.4 82 73.2
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.3e-26 123.6 82 72.0
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.3e-26 123.6 91 64.8
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.7e-26 123.2 91 71.4
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 1.7e-26 123.2 93 67.7
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.7e-26 123.2 82 74.4
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 2.2e-26 122.9 79 75.9
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.2e-26 122.9 82 72.0
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.2e-26 122.9 82 74.4
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.8e-26 122.5 92 67.4
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 2.8e-26 122.5 95 69.5
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 3.7e-26 122.1 91 71.4
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 3.7e-26 122.1 91 69.2
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 3.7e-26 122.1 82 74.4
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 4.8e-26 121.7 82 70.7
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 4.8e-26 121.7 82 74.4
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 4.8e-26 121.7 82 70.7
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 4.8e-26 121.7 82 74.4
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 6.3e-26 121.3 89 69.7
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 6.3e-26 121.3 87 71.3
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 8.3e-26 120.9 81 72.8
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 8.3e-26 120.9 89 71.9
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 8.3e-26 120.9 82 72.0
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 8.3e-26 120.9 88 71.6
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 8.3e-26 120.9 82 73.2
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 1.1e-25 120.6 148 47.3
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 1.1e-25 120.6 88 71.6
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.1e-25 120.6 88 71.6
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.1e-25 120.6 88 71.6
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.1e-25 120.6 88 71.6
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 1.1e-25 120.6 82 73.2
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.4e-25 120.2 82 70.7
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 1.8e-25 119.8 89 67.4
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 1.8e-25 119.8 89 67.4
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 1.8e-25 119.8 88 65.9
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.4e-25 119.4 123 51.2
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 2.4e-25 119.4 92 66.3
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 2.4e-25 119.4 78 71.8
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 2.4e-25 119.4 75 74.7
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 5.4e-25 118.2 83 72.3
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 7.0e-25 117.9 76 73.7
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 7.0e-25 117.9 75 72.0
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 7.0e-25 117.9 82 70.7
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 7.0e-25 117.9 78 71.8
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 7.0e-25 117.9 108 59.3
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 1.2e-24 117.1 82 69.5
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 1.2e-24 117.1 82 69.5
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 1.2e-24 117.1 110 60.0
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.2e-24 117.1 82 68.3
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 1.2e-24 117.1 83 72.3
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 1.6e-24 116.7 83 72.3
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 1.6e-24 116.7 82 70.7
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.7e-24 115.9 81 67.9
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 3.5e-24 115.5 84 70.2
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 4.5e-24 115.2 90 63.3
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 4.5e-24 115.2 84 66.7
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 4.5e-24 115.2 84 66.7
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 4.5e-24 115.2 85 72.9
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 4.5e-24 115.2 100 62.0
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 5.9e-24 114.8 77 74.0
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 5.9e-24 114.8 97 62.9
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 5.9e-24 114.8 86 70.9
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 7.7e-24 114.4 84 66.7
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 7.7e-24 114.4 74 74.3
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 7.7e-24 114.4 84 66.7
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.0e-23 114.0 82 68.3
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.0e-23 114.0 74 75.7
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.0e-23 114.0 83 69.9
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.0e-23 114.0 79 68.4
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 1.3e-23 113.6 85 67.1
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.3e-23 113.6 84 65.5
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.3e-23 113.6 86 69.8
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 1.7e-23 113.2 82 67.1
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 1.7e-23 113.2 83 68.7
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 2.2e-23 112.8 81 69.1
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 2.2e-23 112.8 84 65.5
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 2.2e-23 112.8 79 65.8
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 2.2e-23 112.8 84 69.0
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 2.9e-23 112.5 86 67.4
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 2.9e-23 112.5 78 69.2
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.9e-23 112.5 81 69.1
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 2.9e-23 112.5 82 69.5
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 5.0e-23 111.7 82 68.3
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 8.5e-23 110.9 83 67.5
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 8.5e-23 110.9 116 51.7
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 1.1e-22 110.5 83 67.5
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.1e-22 110.5 156 47.4
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 1.5e-22 110.2 82 65.9
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.9e-22 109.8 160 46.2
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.9e-22 109.8 83 67.5
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 2.5e-22 109.4 82 65.9
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 2.5e-22 109.4 73 71.2
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 3.2e-22 109.0 73 74.0
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 5.5e-22 108.2 75 70.7
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 9.5e-22 107.5 76 67.1
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.2e-21 107.1 76 68.4
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 2.1e-21 106.3 87 60.9
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 3.4e-19 99.0 79 60.8
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 5.7e-19 98.2 78 62.8
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 2.9e-15 85.9 84 48.8
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.2e-13 80.5 89 48.3
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 3.6e-13 79.0 82 53.7
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 2.7e-08 62.8 65 50.8
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 2.7e-08 62.8 65 50.8
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 5.6e-06 55.1 49 55.1


User provided reference genes

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