Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37408 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 0.0e+00 1274.2 639 100.0
ATR0796G139 Amborella trichopoda HOM05D005582 ORTHO05D007028 2.0e-174 616.7 585 55.2
Ciclev10004134m.g Citrus clementina HOM05D005582 ORTHO05D007028 3.4e-174 615.9 589 54.5
Nn4g25411 Nelumbo nucifera HOM05D005582 ORTHO05D007028 3.2e-172 609.4 598 52.7
Manes.15G004000 Manihot esculenta HOM05D005582 ORTHO05D007028 1.5e-169 600.5 591 52.5
PSO170G3214 Papaver somniferum HOM05D005582 ORTHO05D007028 3.7e-168 595.9 589 52.3
GSVIVG01017662001 Vitis vinifera HOM05D005582 ORTHO05D007028 8.2e-168 594.7 598 52.5
Dinv29525 Davidia involucrata HOM05D005582 ORTHO05D007028 1.4e-167 594.0 587 52.5
Aqoxy5G02775 Aquilegia oxysepala HOM05D005582 ORTHO05D007028 1.8e-167 593.6 588 52.4
RcHm_v2.0_Chr4g0426871 Rosa chinensis HOM05D005582 ORTHO05D007028 1.3e-165 587.4 587 50.8
GSVIVG01017603001 Vitis vinifera HOM05D005582 ORTHO05D007028 1.4e-164 583.9 598 51.2
FAN07G0038 Fragaria x ananassa HOM05D005582 ORTHO05D007028 2.5e-164 583.2 585 51.5
FvH4_4g21250 Fragaria vesca HOM05D005582 ORTHO05D007028 3.2e-164 582.8 586 51.0
Actinidia01057 Actinidia chinensis HOM05D005582 ORTHO05D007028 7.2e-164 581.6 592 51.2
Atru.chr11.54 Acer truncatum HOM05D005582 ORTHO05D007028 9.4e-164 581.3 589 51.8
Potri.010G153300 Populus trichocarpa HOM05D005582 ORTHO05D007028 9.4e-164 581.3 588 50.9
CsaV3_6G000150 Cucumis sativus L. HOM05D005582 ORTHO05D007028 1.2e-163 580.9 585 50.1
Prupe.1G108200 Prunus persica HOM05D005582 ORTHO05D007028 1.2e-163 580.9 588 50.7
PGR031G2985 Punica granatum HOM05D005582 ORTHO05D007028 1.2e-163 580.9 587 51.6
QL06p013845 Quercus lobata HOM05D005582 ORTHO05D007028 2.7e-163 579.7 588 51.2
QL93p1872_0012 Quercus lobata HOM05D005582 ORTHO05D007028 2.7e-163 579.7 588 51.2
MD13G1143700 Malus domestica HOM05D005582 ORTHO05D007028 3.0e-162 576.2 586 50.5
CiPaw.02G071000 Carya illinoinensis HOM05D005582 ORTHO05D007028 2.0e-161 573.5 587 50.1
CSS0025323 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 5.7e-161 572.0 598 49.8
vmacro08001 Vaccinium macrocarpon HOM05D005582 ORTHO05D007028 1.3e-160 570.9 606 50.2
TWI53G0357 Tripterygium wilfordii HOM05D005582 ORTHO05D007028 2.2e-160 570.1 592 49.7
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 3.7e-160 569.3 587 50.4
ClCG06G004260 Citrullus lanatus HOM05D005582 ORTHO05D007028 1.1e-159 567.8 584 49.5
Sabra10G0117900 Salix brachista HOM05D005582 ORTHO05D007028 1.4e-159 567.4 617 48.3
Cfa015717 Carpinus fangiana HOM05D005582 ORTHO05D007028 1.8e-159 567.0 589 50.4
Duzib151G1162 Durio zibethinus HOM05D005582 ORTHO05D007028 1.8e-159 567.0 587 51.6
Lalb_Chr06g0160761 Lupinus albus HOM05D005582 ORTHO05D007028 2.4e-159 566.6 587 50.6
Psat6g203520 Pisum sativum HOM05D005582 ORTHO05D007028 2.4e-159 566.6 589 49.7
Rhsim04G0247200 Rhododendron simsii HOM05D005582 ORTHO05D007028 2.4e-159 566.6 596 50.8
Lj3C839G18 Lonicera japonica HOM05D005582 ORTHO05D007028 9.1e-159 564.7 590 50.5
Glyma.10G243400 Glycine max HOM05D005582 ORTHO05D007028 1.6e-158 563.9 594 49.3
Lj5g0009067 Lotus japonicus HOM05D005582 ORTHO05D007028 2.0e-158 563.5 587 49.6
VMungo0720G3059 Vigna mungo HOM05D005582 ORTHO05D007028 2.6e-158 563.1 588 49.8
Thecc.04G310500 Theobroma cacao HOM05D005582 ORTHO05D007028 5.9e-158 562.0 586 51.5
Gohir.D09G066800 Gossypium hirsutum HOM05D005582 ORTHO05D007028 7.7e-158 561.6 587 50.6
Gorai.006G081300 Gossypium raimondii HOM05D005582 ORTHO05D007028 1.7e-157 560.5 587 50.4
Sc25g0001750 Simmondsia chinensis HOM05D005582 ORTHO05D007028 1.7e-157 560.5 597 49.1
Sed0007110 Sechium edule HOM05D005582 ORTHO05D007028 8.5e-157 558.1 584 49.0
Gohir.A09G067200 Gossypium hirsutum HOM05D005582 ORTHO05D007028 1.1e-156 557.8 587 51.3
Phvul.007G062300 Phaseolus vulgaris HOM05D005582 ORTHO05D007028 1.9e-156 557.0 589 49.1
Nitab4.5_0004665g0020 Nicotiana tabacum HOM05D005582 ORTHO05D007028 2.5e-156 556.6 591 50.4
MELO3C021237.2 Cucumis melo HOM05D005582 ORTHO05D007028 7.2e-156 555.1 608 47.4
Medtr1g102710 Medicago truncatula HOM05D005582 ORTHO05D007028 7.2e-156 555.1 586 49.3
CANSAT01G1159 Cannabis sativa HOM05D005582 ORTHO05D007028 1.6e-155 553.9 587 49.1
Eucgr.B02209 Eucalyptus grandis HOM05D005582 ORTHO05D007028 1.6e-155 553.9 589 48.7
Nitab4.5_0000895g0160 Nicotiana tabacum HOM05D005582 ORTHO05D007028 1.6e-155 553.9 591 49.9
Glyma.20G150800 Glycine max HOM05D005582 ORTHO05D007028 8.0e-155 551.6 595 49.2
AUR62002565 Chenopodium quinoa HOM05D005582 ORTHO05D007028 3.0e-154 549.7 592 48.8
arahy.Tifrunner.gnm1.ann1.6ZCT8S Arachis hypogaea HOM05D005582 ORTHO05D007028 1.2e-153 547.7 598 47.8
DCAR_023392 Daucus carota HOM05D005582 ORTHO05D007028 1.5e-153 547.4 590 49.8
Zm00001eb131030 Zea mays HOM05D005582 ORTHO05D007028 9.7e-153 544.7 583 49.1
Sopen12g033750 Solanum pennellii HOM05D005582 ORTHO05D007028 2.2e-152 543.5 598 49.3
HanXRQChr05g0148391 Helianthus annuus HOM05D005582 ORTHO05D007028 2.8e-152 543.1 586 47.6
Ca_10846_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 2.7e-150 536.6 586 48.3
Cc03_g00260 Coffea canephora HOM05D005582 ORTHO05D007028 5.0e-149 532.3 590 48.5
MSTRG.19398 Avicennia marina HOM05D005582 ORTHO05D007028 6.5e-149 531.9 589 47.4
EL10Ac3g06266 Beta vulgaris HOM05D005582 ORTHO05D007028 9.4e-148 528.1 591 47.2
FAN12G2136 Fragaria x ananassa HOM05D005582 ORTHO05D007028 2.7e-147 526.6 586 47.4
arahy.Tifrunner.gnm1.ann1.ZZ97E1 Arachis hypogaea HOM05D005582 ORTHO05D007028 4.7e-147 525.8 587 47.0
Peaxi162Scf01194g00137 Petunia axillaris HOM05D005582 ORTHO05D007028 8.0e-147 525.0 593 48.2
Migut.N00012 Erythranthe guttata HOM05D005582 ORTHO05D007028 1.8e-146 523.9 588 46.4
TPR.G26104 Trifolium pratense HOM05D005582 ORTHO05D007028 1.2e-145 521.2 586 47.4
CDE02G3337 Ceratophyllum demersum HOM05D005582 ORTHO05D007028 1.5e-145 520.8 584 49.1
SGA_v2.0_scaffold227G43203 Striga asiatica HOM05D005582 ORTHO05D007028 1.4e-143 514.2 593 46.9
Solyc12g099010.3 Solanum lycopersicum HOM05D005582 ORTHO05D007028 9.1e-143 511.5 578 48.4
THA.LOC104818852 Tarenaya hassleriana HOM05D005582 ORTHO05D007028 9.1e-143 511.5 593 47.6
AUR62029987 Chenopodium quinoa HOM05D005582 ORTHO05D007028 5.9e-142 508.8 598 47.2
ECA246G0223 Erigeron canadensis HOM05D005582 ORTHO05D007028 1.3e-141 507.7 584 45.9
Oeu022697.1 Olea europaea HOM05D005582 ORTHO05D007028 1.5e-140 504.2 637 43.8
Hund12246 Selenicereus undatus HOM05D005582 ORTHO05D007028 2.5e-140 503.4 592 45.4
AL6G29800 Arabidopsis lyrata HOM05D005582 ORTHO05D007028 1.2e-139 501.1 589 46.7
Carub.0006s1680 Capsella rubella HOM05D005582 ORTHO05D007028 3.6e-139 499.6 586 46.6
Thhalv10012423m.g Eutrema salsugineum HOM05D005582 ORTHO05D007028 6.1e-139 498.8 588 46.3
A10p21030 Brassica napus HOM05D005582 ORTHO05D007028 2.3e-138 496.9 586 46.8
BraA10t44167Z Brassica rapa HOM05D005582 ORTHO05D007028 2.3e-138 496.9 586 46.8
BcaB08g36669 Brassica carinata HOM05D005582 ORTHO05D007028 8.8e-138 495.0 581 46.1
AT5G18525 Arabidopsis thaliana HOM05D005582 ORTHO05D007028 5.7e-137 492.3 587 46.3
TAR362G0979 Trochodendron aralioides HOM05D005582 ORTHO05D007028 7.5e-137 491.9 594 46.3
C09p57960 Brassica napus HOM05D005582 ORTHO05D007028 9.8e-137 491.5 586 46.6
BolC9t58663H Brassica oleracea HOM05D005582 ORTHO05D007028 9.8e-137 491.5 586 46.6
HPP92_010030 Vanilla planifolia HOM05D005582 ORTHO05D007028 4.9e-136 489.2 587 44.5
Sp6g25800 Schrenkiella parvula HOM05D005582 ORTHO05D007028 6.6e-133 478.8 587 45.0
BcaB08g36665 Brassica carinata HOM05D005582 ORTHO05D007028 5.6e-132 475.7 587 44.8
Lsat_1_v5_gn_6_117861 Lactuca sativa HOM05D001037 ORTHO05D007028 4.0e-130 469.5 581 44.9
Aa31LG11G11190 Aethionema arabicum HOM05D005582 ORTHO05D007028 6.8e-130 468.8 586 45.1
Ah.07g203770 Amaranthus hybridus HOM05D005582 ORTHO05D007028 3.5e-126 456.4 584 41.8
Mapoly0075s0059 Marchantia polymorpha HOM05D005582 ORTHO05D007028 7.3e-116 422.2 621 38.6
Cpa.g.sc146.39 Carica papaya HOM05D005582 ORTHO05D007028 8.9e-106 388.7 591 39.8
Ca_29759_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 3.2e-95 353.6 375 49.6
AagrBONN_evm.TU.Sc2ySwM_344.3353 Anthoceros agrestis HOM05D005582 ORTHO05D007028 2.7e-94 350.5 586 36.0
CSS0001073 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 7.8e-94 349.0 597 37.7
DCAR_023431 Daucus carota HOM05D005582 ORTHO05D007028 3.1e-90 337.0 457 42.2
SalBow5G3991 Salvia bowleyana HOM05D005582 ORTHO05D007028 1.1e-87 328.6 415 43.6
Ca_10845_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 4.6e-86 323.2 375 46.9
BcaC04g18671 Brassica carinata HOM05D005582 ORTHO05D007028 3.9e-85 320.1 587 36.1
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 3.4e-81 307.0 529 39.5
CAN.G484.83 Capsicum annuum HOM05D005582 ORTHO05D007028 1.3e-77 295.0 301 51.5
CARHR194490 Cardamine hirsuta HOM05D005582 ORTHO05D007028 5.5e-55 219.9 208 55.3
HPP92_015254 Vanilla planifolia HOM05D005582 ORTHO05D007028 2.0e-52 211.5 460 33.5
Duzib151G0781 Durio zibethinus HOM05D005582 ORTHO05D007028 1.8e-50 204.9 211 50.7
Migut.K01509 Erythranthe guttata HOM05D005582 ORTHO05D007028 1.1e-47 195.7 233 45.5
SMO203G0276 Selaginella moellendorffii HOM05D005582 ORTHO05D007028 2.6e-44 184.5 293 39.2
CBR_g49232 Chara braunii HOM05D005582 ORTHO05D007028 7.4e-44 183.0 581 25.8
SEGI_29964 Sequoiadendron giganteum HOM05D000557 ORTHO05D007028 9.8e-28 129.4 78 74.4
SMO203G0100 Selaginella moellendorffii HOM05D005582 ORTHO05D007028 2.6e-20 104.8 110 49.1
Ca_10843_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 4.9e-19 100.5 157 35.7
Ca_10844_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 4.9e-19 100.5 157 35.7
CBR_g52179 Chara braunii HOM05D005582 ORTHO05D006678 3.5e-09 67.8 121 32.2


User provided reference genes

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