Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37350 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 3.1e-226 788.1 396 100.0
SEGI_00772 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 4.1e-117 425.6 328 70.4
SEGI_15935 Sequoiadendron giganteum HOM05D059367 ORTHO05D384589 8.9e-88 328.2 300 60.7
SEGI_09869 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 2.1e-33 147.5 164 54.9
SEGI_29516 Sequoiadendron giganteum HOM05D000426 ORTHO05D000328 4.5e-31 139.8 90 75.6
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 7.1e-29 132.5 181 48.1
SEGI_29674 Sequoiadendron giganteum HOM05D000062 ORTHO05D000043 1.2e-28 131.7 95 73.7
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 3.9e-27 126.7 119 63.0
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.5e-26 124.0 105 66.7
SEGI_31046 Sequoiadendron giganteum HOM05D000073 ORTHO05D000033 3.7e-25 120.2 82 78.0
SEGI_20139 Sequoiadendron giganteum HOM05D000062 ORTHO05D000043 7.7e-23 112.5 69 82.6
HanXRQChr14g0450911 Helianthus annuus HOM05D005231 ORTHO05D006387 1.1e-21 108.6 172 41.9
HPP92_011387 Vanilla planifolia HOM05D005231 ORTHO05D006387 2.5e-21 107.5 131 48.1
Hma1.2p1_0571F.1_g180760 Hydrangea macrophylla HOM05D005231 ORTHO05D006387 3.2e-21 107.1 142 45.8
Atru.chr6.2511 Acer truncatum HOM05D005231 ORTHO05D006387 1.2e-20 105.1 109 53.2
SEGI_08225 Sequoiadendron giganteum HOM05D000832 ORTHO05D015138 1.2e-20 105.1 167 43.7
CiPaw.03G052100 Carya illinoinensis HOM05D005231 ORTHO05D006387 1.6e-20 104.8 132 46.2
Lj7A607T31 Lonicera japonica HOM05D005231 ORTHO05D006387 1.6e-20 104.8 164 39.0
ECA238G4317 Erigeron canadensis HOM05D005231 ORTHO05D006387 2.1e-20 104.4 132 45.5
Aqoxy5G03496 Aquilegia oxysepala HOM05D005231 ORTHO05D006387 3.6e-20 103.6 115 50.4
CiPaw.04G034400 Carya illinoinensis HOM05D005231 ORTHO05D006387 3.6e-20 103.6 131 46.6
Lsat_1_v5_gn_2_93920 Lactuca sativa HOM05D005231 ORTHO05D006387 3.6e-20 103.6 132 46.2
TAR371G0773 Trochodendron aralioides HOM05D005231 ORTHO05D006387 3.6e-20 103.6 116 49.1
Actinidia30894 Actinidia chinensis HOM05D005231 ORTHO05D006387 4.6e-20 103.2 132 46.2
MSTRG.3095 Avicennia marina HOM05D005231 ORTHO05D006387 4.6e-20 103.2 132 43.9
CsaV3_3G015930 Cucumis sativus L. HOM05D005231 ORTHO05D006387 4.6e-20 103.2 131 44.3
CSS0002510 Camellia sinensis var. sinensis HOM05D005231 ORTHO05D006387 6.1e-20 102.8 82 63.4
CSS0033455 Camellia sinensis var. sinensis HOM05D005231 ORTHO05D006387 6.1e-20 102.8 82 63.4
ClCG05G007180 Citrullus lanatus HOM05D005231 ORTHO05D006387 7.9e-20 102.4 131 44.3
Eucgr.I01665 Eucalyptus grandis HOM05D005231 ORTHO05D006387 7.9e-20 102.4 161 37.9
Oeu050426.1 Olea europaea HOM05D005231 ORTHO05D006387 7.9e-20 102.4 142 44.4
TWI12G0663 Tripterygium wilfordii HOM05D005231 ORTHO05D006387 7.9e-20 102.4 110 52.7
TWI36G1540 Tripterygium wilfordii HOM05D005231 ORTHO05D006387 1.4e-19 101.7 110 51.8
GSVIVG01001825001 Vitis vinifera HOM05D005231 ORTHO05D006387 1.4e-19 101.7 131 45.0
Ciclev10014086m.g Citrus clementina HOM05D005231 ORTHO05D006387 1.8e-19 101.3 138 42.8
Cc07_g00560 Coffea canephora HOM05D005231 ORTHO05D006387 1.8e-19 101.3 132 45.5
Rhsim08G0045200 Rhododendron simsii HOM05D005231 ORTHO05D006387 1.8e-19 101.3 132 46.2
Sed0020589 Sechium edule HOM05D005231 ORTHO05D006387 2.3e-19 100.9 131 44.3
Solyc11g068640.2 Solanum lycopersicum HOM05D005231 ORTHO05D006387 2.3e-19 100.9 132 45.5
Sopen11g027360 Solanum pennellii HOM05D005231 ORTHO05D006387 2.3e-19 100.9 132 45.5
CANSAT64G0673 Cannabis sativa HOM05D005231 ORTHO05D006387 3.0e-19 100.5 132 43.2
MD14G1190000 Malus domestica HOM05D005231 ORTHO05D006387 3.0e-19 100.5 132 43.9
Manes.17G106200 Manihot esculenta HOM05D005231 ORTHO05D006387 3.0e-19 100.5 131 44.3
Sabra16G0215400 Salix brachista HOM05D005231 ORTHO05D006387 3.0e-19 100.5 132 43.9
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 3.9e-19 100.1 131 43.5
MBI11_g15863_MAGBIO Magnolia biondii HOM05D005231 ORTHO05D006387 3.9e-19 100.1 81 59.3
MD06G1184100 Malus domestica HOM05D005231 ORTHO05D006387 3.9e-19 100.1 132 43.9
Nitab4.5_0000731g0120 Nicotiana tabacum HOM05D005231 ORTHO05D006387 3.9e-19 100.1 132 44.7
Nitab4.5_0006008g0040 Nicotiana tabacum HOM05D005231 ORTHO05D006387 3.9e-19 100.1 132 44.7
Cfa007256 Carpinus fangiana HOM05D005231 ORTHO05D006387 5.1e-19 99.8 108 51.9
Haze_14831 Corylus avellana HOM05D005231 ORTHO05D006387 5.1e-19 99.8 137 43.8
Potri.001G334300 Populus trichocarpa HOM05D005231 ORTHO05D006387 5.1e-19 99.8 132 43.9
Prupe.5G183000 Prunus persica HOM05D005231 ORTHO05D006387 5.1e-19 99.8 82 61.0
Thecc.04G029800 Theobroma cacao HOM05D005231 ORTHO05D006387 5.1e-19 99.8 81 63.0
COL.COLO4_08767 Corchorus olitorius HOM05D005231 ORTHO05D006387 6.7e-19 99.4 81 63.0
Manes.15G157900 Manihot esculenta HOM05D005231 ORTHO05D006387 6.7e-19 99.4 81 61.7
THA.LOC104822412 Tarenaya hassleriana HOM05D005231 ORTHO05D006387 6.7e-19 99.4 132 43.9
vmacro18325 Vaccinium macrocarpon HOM05D005231 ORTHO05D006387 6.7e-19 99.4 82 61.0
CAN.G745.7 Capsicum annuum HOM05D005231 ORTHO05D006387 8.8e-19 99.0 82 61.0
Cpa.g.sc130.10 Carica papaya HOM05D005231 ORTHO05D006387 8.8e-19 99.0 82 61.0
Dinv25680 Davidia involucrata HOM05D005231 ORTHO05D006387 8.8e-19 99.0 81 60.5
Duzib147G1087 Durio zibethinus HOM05D005231 ORTHO05D006387 8.8e-19 99.0 109 50.5
Nn4g22395 Nelumbo nucifera HOM05D005231 ORTHO05D006387 8.8e-19 99.0 81 61.7
PSO063G5961 Papaver somniferum HOM05D005231 ORTHO05D006387 8.8e-19 99.0 110 48.2
Peaxi162Scf00224g00118 Petunia axillaris HOM05D005231 ORTHO05D006387 8.8e-19 99.0 82 61.0
QL02p072461 Quercus lobata HOM05D005231 ORTHO05D006387 8.8e-19 99.0 80 62.5
RcHm_v2.0_Chr7g0180111 Rosa chinensis HOM05D005231 ORTHO05D006387 8.8e-19 99.0 82 61.0
Lj1g0000655 Lotus japonicus HOM05D005231 ORTHO05D006387 1.1e-18 98.6 75 64.0
Nn2g10551 Nelumbo nucifera HOM05D005231 ORTHO05D006387 1.1e-18 98.6 81 60.5
Duzib264G1000 Durio zibethinus HOM05D005231 ORTHO05D006387 1.5e-18 98.2 81 61.7
Lalb_Chr14g0363091 Lupinus albus HOM05D005231 ORTHO05D006387 1.5e-18 98.2 82 59.8
Hund15390 Selenicereus undatus HOM05D005231 ORTHO05D006387 1.5e-18 98.2 82 59.8
SEGI_08915 Sequoiadendron giganteum HOM05D005231 ORTHO05D000043 1.5e-18 98.2 49 93.9
AL3G10350 Arabidopsis lyrata HOM05D005231 ORTHO05D006387 2.5e-18 97.4 132 42.4
AT3G01780 Arabidopsis thaliana HOM05D005231 ORTHO05D006387 2.5e-18 97.4 132 42.4
Thhalv10019930m.g Eutrema salsugineum HOM05D005231 ORTHO05D006387 2.5e-18 97.4 132 42.4
FvH4_5g15940 Fragaria vesca HOM05D005231 ORTHO05D006387 2.5e-18 97.4 82 59.8
FAN04G1242 Fragaria x ananassa HOM05D005231 ORTHO05D006387 2.5e-18 97.4 82 59.8
FAN08G2159 Fragaria x ananassa HOM05D005231 ORTHO05D006387 2.5e-18 97.4 82 59.8
FAN13G1708 Fragaria x ananassa HOM05D005231 ORTHO05D006387 2.5e-18 97.4 82 59.8
FAN18G1846 Fragaria x ananassa HOM05D005231 ORTHO05D006387 2.5e-18 97.4 82 59.8
Gohir.A09G034100 Gossypium hirsutum HOM05D005231 ORTHO05D006387 2.5e-18 97.4 81 61.7
PGR142G3743 Punica granatum HOM05D005231 ORTHO05D006387 2.5e-18 97.4 132 42.4
Sp3g00280 Schrenkiella parvula HOM05D005231 ORTHO05D006387 2.5e-18 97.4 132 42.4
SGA_v2.0_scaffold47G17578 Striga asiatica HOM05D005231 ORTHO05D006387 2.5e-18 97.4 132 40.9
DCAR_021762 Daucus carota HOM05D005231 ORTHO05D006387 3.3e-18 97.1 82 59.8
PSO782G5010 Papaver somniferum HOM05D005231 ORTHO05D006387 3.3e-18 97.1 110 47.3
EL10Ac6g14067 Beta vulgaris HOM05D005231 ORTHO05D006387 4.3e-18 96.7 110 48.2
Migut.K01445 Erythranthe guttata HOM05D005231 ORTHO05D006387 4.3e-18 96.7 132 40.2
Phvul.001G096100 Phaseolus vulgaris HOM05D005231 ORTHO05D006387 4.3e-18 96.7 82 58.5
VMungo1215G0650 Vigna mungo HOM05D005231 ORTHO05D006387 4.3e-18 96.7 82 58.5
Glyma.16G060500 Glycine max HOM05D005231 ORTHO05D006387 5.7e-18 96.3 81 59.3
Glyma.19G086600 Glycine max HOM05D005231 ORTHO05D006387 5.7e-18 96.3 81 59.3
Aa31LG5G10910 Aethionema arabicum HOM05D005231 ORTHO05D006387 7.4e-18 95.9 132 42.4
CARHR075150 Cardamine hirsuta HOM05D005231 ORTHO05D006387 7.4e-18 95.9 132 41.7
Gohir.D09G035000 Gossypium hirsutum HOM05D005231 ORTHO05D006387 7.4e-18 95.9 81 60.5
Gorai.006G039900 Gossypium raimondii HOM05D005231 ORTHO05D006387 7.4e-18 95.9 81 60.5
SalBow1G7136 Salvia bowleyana HOM05D005231 ORTHO05D006387 7.4e-18 95.9 132 39.4
BcaC03g16893 Brassica carinata HOM05D005231 ORTHO05D006387 9.7e-18 95.5 82 58.5
A02p30380 Brassica napus HOM05D005231 ORTHO05D006387 9.7e-18 95.5 82 58.5
C02p47900 Brassica napus HOM05D005231 ORTHO05D006387 9.7e-18 95.5 82 58.5
BolC2t10823H Brassica oleracea HOM05D005231 ORTHO05D006387 9.7e-18 95.5 82 58.5
BraA02t08053Z Brassica rapa HOM05D005231 ORTHO05D006387 9.7e-18 95.5 82 58.5
Carub.0003s0028 Capsella rubella HOM05D005231 ORTHO05D006387 9.7e-18 95.5 132 41.7
AUR62038506 Chenopodium quinoa HOM05D005231 ORTHO05D006387 9.7e-18 95.5 82 57.3
Sc03g0006820 Simmondsia chinensis HOM05D005231 ORTHO05D006387 9.7e-18 95.5 82 58.5
Psat3g170000 Pisum sativum HOM05D005231 ORTHO05D006387 1.3e-17 95.1 74 62.2
Ca_26723_v3 Cicer arietinum L. HOM05D005231 ORTHO05D006387 1.7e-17 94.7 74 62.2
Lj1g0013476 Lotus japonicus HOM05D005231 ORTHO05D006387 1.7e-17 94.7 75 61.3
TPR.G38280 Trifolium pratense HOM05D005231 ORTHO05D006387 1.7e-17 94.7 74 62.2
AUR62014230 Chenopodium quinoa HOM05D005231 ORTHO05D006387 3.7e-17 93.6 110 46.4
Os02g0793100 Oryza sativa ssp. japonica HOM05D005231 ORTHO05D006387 3.7e-17 93.6 83 53.0
SEGI_30310 Sequoiadendron giganteum HOM05D059367 ORTHO05D386732 4.8e-17 93.2 91 57.1
Zm00001eb091560 Zea mays HOM05D005231 ORTHO05D006387 6.3e-17 92.8 81 54.3
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 8.2e-17 92.4 82 56.1
ATR0693G284 Amborella trichopoda HOM05D005231 ORTHO05D006387 1.4e-16 91.7 81 56.8
SHI03892 Sapria himalayana HOM05D005231 ORTHO05D006387 1.4e-16 91.7 131 41.2
arahy.Tifrunner.gnm1.ann1.L2Q6WP Arachis hypogaea HOM05D005231 ORTHO05D006387 1.8e-16 91.3 75 61.3
arahy.Tifrunner.gnm1.ann1.M0JNNK Arachis hypogaea HOM05D005231 ORTHO05D006387 1.8e-16 91.3 75 61.3
Ah.01g004700 Amaranthus hybridus HOM05D005231 ORTHO05D006387 4.1e-16 90.1 82 53.7
unitig_21.g20479 Utricularia gibba HOM05D005231 ORTHO05D006387 2.6e-15 87.4 131 38.9
Mapoly0078s0040 Marchantia polymorpha HOM05D005231 ORTHO05D006387 3.4e-15 87.0 106 46.2
Zm00001eb201030 Zea mays HOM05D005231 ORTHO05D006387 4.5e-15 86.7 81 50.6
SMO143G0109 Selaginella moellendorffii HOM05D005231 ORTHO05D006387 1.7e-14 84.7 87 50.6
Pp3c14_16610 Physcomitrium patens HOM05D005231 ORTHO05D006387 5.0e-14 83.2 80 50.0
Pp3c2_2820 Physcomitrium patens HOM05D005231 ORTHO05D006387 1.4e-13 81.6 73 53.4
AUR62014240 Chenopodium quinoa HOM05D005231 ORTHO05D006387 5.5e-13 79.7 67 56.7
Pp3c10_18980 Physcomitrium patens HOM05D005231 ORTHO05D006387 9.4e-13 79.0 81 49.4
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.6e-12 78.2 52 75.0
THA.LOC104823986 Tarenaya hassleriana HOM05D005231 ORTHO05D006387 3.6e-12 77.0 67 56.7
CBR_g21747 Chara braunii HOM05D005231 ORTHO05D006387 1.4e-08 65.1 81 40.7
PGSC0003DMG400016742 Solanum tuberosum HOM05D000426 ORTHO05D000328 5.3e-08 63.2 91 42.9
Nitab4.5_0000153g0190 Nicotiana tabacum HOM05D000426 ORTHO05D000328 1.2e-07 62.0 91 42.9
Solyc03g096670.3 Solanum lycopersicum HOM05D000426 ORTHO05D000328 1.2e-07 62.0 91 42.9
Sopen03g026890 Solanum pennellii HOM05D000426 ORTHO05D000328 1.2e-07 62.0 91 42.9
Mapoly0017s0024 Marchantia polymorpha HOM05D000426 ORTHO05D000328 4.5e-07 60.1 63 47.6
MapolyY_A0044 Marchantia polymorpha HOM05D000426 ORTHO05D000328 4.5e-07 60.1 63 47.6
TPR.G22896 Trifolium pratense HOM05D000426 ORTHO05D000328 5.9e-07 59.7 57 49.1
Nitab4.5_0005632g0010 Nicotiana tabacum HOM05D000426 ORTHO05D000328 1.0e-06 58.9 87 43.7
Pp3c7_5390 Physcomitrium patens HOM05D000426 ORTHO05D000328 1.0e-06 58.9 68 48.5
BraA08t34044Z Brassica rapa HOM05D000426 ORTHO05D000328 1.3e-06 58.5 88 40.9
MBI06_g05055_MAGBIO Magnolia biondii HOM05D000426 ORTHO05D000328 1.3e-06 58.5 57 49.1
Psat0s1696g0200 Pisum sativum HOM05D000426 ORTHO05D000328 1.3e-06 58.5 57 47.4
Nitab4.5_0009622g0010 Nicotiana tabacum HOM05D000426 ORTHO05D000328 1.7e-06 58.2 66 42.4
MBI14_g43665_MAGBIO Magnolia biondii HOM05D000426 ORTHO05D000328 2.2e-06 57.8 93 41.9
MBI05_g35181_MAGBIO Magnolia biondii HOM05D000426 ORTHO05D000328 2.9e-06 57.4 89 39.3
A08p20910 Brassica napus HOM05D000426 ORTHO05D000328 5.0e-06 56.6 88 40.9
SMO196G0151 Selaginella moellendorffii HOM05D000426 ORTHO05D000328 5.0e-06 56.6 75 40.0
EL10Ac7g16075 Beta vulgaris HOM05D000426 ORTHO05D000328 6.5e-06 56.2 94 34.0
CDE09G1006 Ceratophyllum demersum HOM05D000426 ORTHO05D000328 6.5e-06 56.2 94 37.2
Pp3c11_18330 Physcomitrium patens HOM05D000426 ORTHO05D000328 6.5e-06 56.2 70 44.3
TAR369G1026 Trochodendron aralioides HOM05D000426 ORTHO05D000328 6.5e-06 56.2 74 43.2
TAR633G0696 Trochodendron aralioides HOM05D000426 ORTHO05D000328 6.5e-06 56.2 53 52.8
Nitab4.5_0000463g0070 Nicotiana tabacum HOM05D000426 ORTHO05D000328 8.5e-06 55.8 66 42.4


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