Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37348 Sequoiadendron giganteum HOM05D007618 ORTHO05D009606 1.1e-75 286.6 152 100.0
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 2.1e-45 186.0 164 59.8
PGR142G1310 Punica granatum HOM05D007618 ORTHO05D009606 4.7e-45 184.9 164 58.5
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 1.4e-44 183.3 164 59.1
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 1.8e-44 183.0 165 58.8
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 2.3e-44 182.6 164 59.1
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 2.3e-44 182.6 164 59.8
Eucgr.I01514 Eucalyptus grandis HOM05D007618 ORTHO05D009606 3.0e-44 182.2 164 57.9
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 2.0e-43 179.5 164 57.9
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 3.3e-43 178.7 164 55.5
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 3.3e-43 178.7 164 57.3
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 4.4e-43 178.3 164 58.5
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 4.4e-43 178.3 164 57.3
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 4.4e-43 178.3 164 58.5
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 5.7e-43 177.9 164 58.5
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 5.7e-43 177.9 164 56.7
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 5.7e-43 177.9 164 57.9
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 5.7e-43 177.9 166 56.0
DCAR_022841 Daucus carota HOM05D007618 ORTHO05D009606 1.3e-42 176.8 142 61.3
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 1.7e-42 176.4 164 55.5
HanXRQChr14g0459071 Helianthus annuus HOM05D007618 ORTHO05D009606 1.7e-42 176.4 164 54.9
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 1.7e-42 176.4 164 56.7
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 2.2e-42 176.0 164 57.9
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 2.2e-42 176.0 164 57.9
Migut.B00014 Erythranthe guttata HOM05D007618 ORTHO05D009606 2.8e-42 175.6 164 54.9
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 2.8e-42 175.6 164 57.3
HPP92_022157 Vanilla planifolia HOM05D007618 ORTHO05D009606 2.8e-42 175.6 164 56.7
PSO541G4833 Papaver somniferum HOM05D007618 ORTHO05D009606 3.7e-42 175.3 164 56.7
Gohir.D10G000400 Gossypium hirsutum HOM05D007618 ORTHO05D009606 4.8e-42 174.9 164 56.1
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 4.8e-42 174.9 164 57.3
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 8.2e-42 174.1 164 55.5
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 8.2e-42 174.1 164 55.5
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 1.4e-41 173.3 164 54.9
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 1.8e-41 172.9 165 55.2
Cc09_g10690 Coffea canephora HOM05D007618 ORTHO05D009606 4.1e-41 171.8 164 54.9
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 4.1e-41 171.8 164 56.1
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 7.0e-41 171.0 164 54.9
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 1.2e-40 170.2 158 55.7
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 2.0e-40 169.5 158 57.0
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 5.9e-40 167.9 157 55.4
CDE05G0820 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 5.9e-40 167.9 164 53.7
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 5.9e-40 167.9 164 53.7
Gorai.011G000800 Gossypium raimondii HOM05D002478 ORTHO05D003331 3.8e-39 165.2 157 55.4
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 3.8e-39 165.2 154 56.5
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 5.0e-39 164.9 158 55.1
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 6.5e-39 164.5 158 54.4
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 8.5e-39 164.1 154 55.8
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 1.5e-38 163.3 157 56.1
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 1.9e-38 162.9 157 54.8
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 1.9e-38 162.9 158 52.5
PSO675G2292 Papaver somniferum HOM05D007618 ORTHO05D009606 1.9e-38 162.9 164 54.3
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 9.4e-38 160.6 169 49.1
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 1.2e-37 160.2 158 55.1
SMO367G1105 Selaginella moellendorffii HOM05D007618 ORTHO05D009606 1.2e-37 160.2 150 54.7
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 1.6e-37 159.8 158 53.8
SGA_v2.0_scaffold32G13341 Striga asiatica HOM05D007618 ORTHO05D009606 1.6e-37 159.8 157 53.5
AUR62011704 Chenopodium quinoa HOM05D007618 ORTHO05D009606 2.1e-37 159.5 167 51.5
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 3.0e-36 155.6 166 54.2
Pp3c3_10700 Physcomitrium patens HOM05D007618 ORTHO05D009606 1.5e-35 153.3 166 48.2
Gohir.A10G000200 Gossypium hirsutum HOM05D002478 ORTHO05D003331 2.0e-35 152.9 178 48.9
arahy.Tifrunner.gnm1.ann1.ZSY7EJ Arachis hypogaea HOM05D007618 ORTHO05D009606 3.3e-35 152.1 158 52.5
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 4.8e-34 148.3 161 50.3
Peaxi162Scf00362g00251 Petunia axillaris HOM05D007618 ORTHO05D009606 9.1e-33 144.1 158 49.4
QL11p055571 Quercus lobata HOM05D007618 ORTHO05D009606 1.2e-32 143.7 133 57.9
Lsat_1_v5_gn_8_120421 Lactuca sativa HOM05D007618 ORTHO05D009606 1.6e-32 143.3 136 55.1
Nitab4.5_0011212g0030 Nicotiana tabacum HOM05D007618 ORTHO05D009606 1.6e-32 143.3 133 57.1
Zm00001eb002550 Zea mays HOM05D007618 ORTHO05D009606 2.7e-32 142.5 133 53.4
arahy.Tifrunner.gnm1.ann1.U2J3P2 Arachis hypogaea HOM05D007618 ORTHO05D009606 7.7e-32 141.0 132 56.1
VMungo1309G2136 Vigna mungo HOM05D007618 ORTHO05D009606 2.9e-31 139.0 133 54.9
Actinidia20565 Actinidia chinensis HOM05D007618 ORTHO05D009606 1.1e-30 137.1 133 55.6
Sc18g0005980 Simmondsia chinensis HOM05D007618 ORTHO05D009606 7.2e-30 134.4 136 52.9
vmacro02327 Vaccinium macrocarpon HOM05D007618 ORTHO05D009606 2.1e-29 132.9 206 40.8
Glyma.04G001200 Glycine max HOM05D007618 ORTHO05D009606 7.5e-27 124.4 125 53.6
arahy.Tifrunner.gnm1.ann1.DQ7S7B Arachis hypogaea HOM05D007618 ORTHO05D009606 3.5e-24 115.5 116 53.4
Rhsim11G0196900 Rhododendron simsii HOM05D007618 ORTHO05D009606 1.3e-23 113.6 109 56.9
TPR.G29338 Trifolium pratense HOM05D007618 ORTHO05D009606 3.8e-23 112.1 92 59.8
ECA233G1377 Erigeron canadensis HOM05D007618 ORTHO05D009606 1.9e-22 109.8 94 56.4
CBR_g37948 Chara braunii HOM05D007618 ORTHO05D009606 3.2e-22 109.0 163 36.2
CBR_g30676 Chara braunii HOM05D007618 ORTHO05D009606 2.1e-21 106.3 163 35.6
Cre03.g200050 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 4.4e-19 98.6 161 33.5
Atru.chr5.3531 Acer truncatum HOM05D007618 ORTHO05D009606 1.8e-17 93.2 96 53.1
Cre03.g200000 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 1.8e-17 93.2 158 34.8
PGSC0003DMG401014675 Solanum tuberosum HOM05D007618 ORTHO05D009606 3.1e-17 92.4 97 51.5
Nn1g00573 Nelumbo nucifera HOM05D007618 ORTHO05D009606 7.0e-17 91.3 127 44.1
Psat5g000560 Pisum sativum HOM05D007618 ORTHO05D009606 1.2e-16 90.5 60 73.3
TPR.G38509 Trifolium pratense HOM05D007618 ORTHO05D009606 1.6e-16 90.1 60 73.3
Cre12.g506850 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 2.5e-14 82.8 162 31.5
MCO11G779 Micromonas commoda HOM05D007618 ORTHO05D009606 3.3e-14 82.4 162 32.1
Psat5g000680 Pisum sativum HOM05D007618 ORTHO05D009606 9.5e-14 80.9 107 43.0
ECA233G4785 Erigeron canadensis HOM05D007618 ORTHO05D009606 1.6e-13 80.1 69 53.6
Actinidia18005 Actinidia chinensis HOM05D007618 ORTHO05D009606 6.1e-13 78.2 88 47.7
Atru.chr5.3316 Acer truncatum HOM05D000282 ORTHO05D000272 2.0e-11 73.2 59 61.0
CDE05G1760 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 3.4e-11 72.4 56 58.9
Oeu006123.1 Olea europaea HOM05D007618 ORTHO05D009606 9.8e-11 70.9 52 59.6
Atru.chr8.2195 Acer truncatum HOM05D000282 ORTHO05D009606 1.3e-10 70.5 55 63.6
FAN24G0716 Fragaria x ananassa HOM05D007618 ORTHO05D009606 1.3e-10 70.5 52 63.5
arahy.Tifrunner.gnm1.ann1.0TM8HZ Arachis hypogaea HOM05D007618 ORTHO05D009606 1.1e-09 67.4 67 55.2
Cc03_g12640 Coffea canephora HOM05D007618 ORTHO05D009606 7.0e-09 64.7 50 60.0
Atru.chr9.1689 Acer truncatum HOM05D000282 ORTHO05D009606 5.9e-08 61.6 50 60.0
Nn5g30826 Nelumbo nucifera HOM05D007618 ORTHO05D009606 1.3e-07 60.5 75 46.7
SEGI_38830 Sequoiadendron giganteum HOM05D000059 ORTHO05D000528 7.3e-06 54.7 134 25.4


User provided reference genes

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