Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37322 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 5.6e-311 1070.1 550 100.0
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 3.0e-174 615.9 502 64.3
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 2.4e-168 596.3 501 60.7
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 8.6e-166 587.8 502 59.8
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 4.3e-165 585.5 511 59.7
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 5.6e-165 585.1 499 60.7
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 6.2e-164 581.6 502 58.8
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 1.4e-163 580.5 502 58.8
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 1.4e-163 580.5 499 59.9
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 1.8e-163 580.1 502 59.8
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 3.1e-163 579.3 499 59.7
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 1.5e-162 577.0 499 59.3
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 2.6e-162 576.2 502 60.6
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 9.9e-162 574.3 505 59.8
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 9.9e-162 574.3 499 58.5
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 1.3e-161 573.9 503 59.0
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 1.7e-161 573.5 499 58.7
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 1.7e-161 573.5 499 59.1
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 2.9e-161 572.8 499 59.1
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 8.4e-161 571.2 543 55.1
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 5.4e-160 568.5 500 58.4
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 7.1e-160 568.2 499 58.5
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 9.2e-160 567.8 502 57.8
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 9.2e-160 567.8 499 58.7
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 1.0e-158 564.3 499 58.9
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 1.0e-158 564.3 496 58.7
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 3.0e-158 562.8 503 56.5
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 5.1e-158 562.0 503 57.7
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 5.1e-158 562.0 513 56.9
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 5.1e-158 562.0 501 58.3
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 8.7e-158 561.2 499 57.9
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 1.5e-157 560.5 503 56.3
BcaB04g17016 Brassica carinata HOM05D004500 ORTHO05D005775 2.5e-157 559.7 504 57.1
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 3.3e-157 559.3 499 57.3
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 5.6e-157 558.5 510 56.3
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 7.3e-157 558.1 503 57.3
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 9.6e-157 557.8 528 55.9
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 9.6e-157 557.8 499 57.5
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 9.6e-157 557.8 522 55.6
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 1.6e-156 557.0 499 57.7
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 2.8e-156 556.2 528 55.7
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 2.8e-156 556.2 500 57.8
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 2.8e-156 556.2 522 55.7
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 3.6e-156 555.8 500 58.0
Os11g0137300 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 4.7e-156 555.4 502 55.8
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 8.1e-156 554.7 502 55.6
Rhsim13G0205000 Rhododendron simsii HOM05D004500 ORTHO05D005775 2.4e-155 553.1 506 56.3
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 2.4e-155 553.1 499 56.9
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 4.0e-155 552.4 499 57.7
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 4.0e-155 552.4 512 56.6
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 1.5e-154 550.4 512 56.8
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 4.4e-154 548.9 499 57.3
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 5.8e-154 548.5 503 55.9
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 5.8e-154 548.5 503 56.5
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 7.6e-154 548.1 506 56.1
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 7.6e-154 548.1 506 56.7
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 9.9e-154 547.7 503 56.9
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 1.3e-153 547.4 503 57.1
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 1.3e-153 547.4 500 57.6
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 2.9e-153 546.2 493 57.8
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 2.4e-152 543.1 551 51.4
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 2.4e-152 543.1 500 55.4
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 7.1e-152 541.6 509 55.4
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 1.6e-151 540.4 502 55.6
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 1.6e-151 540.4 499 56.1
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 2.1e-151 540.0 503 53.1
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 2.1e-151 540.0 503 54.9
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 2.1e-151 540.0 503 54.9
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 1.5e-149 533.9 503 54.7
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 1.9e-149 533.5 510 54.5
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 7.3e-149 531.6 513 55.4
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 9.6e-149 531.2 519 55.1
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 9.6e-149 531.2 497 54.9
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 2.1e-148 530.0 503 53.5
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 2.8e-148 529.6 528 54.5
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 8.1e-148 528.1 494 55.5
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 1.8e-147 526.9 503 53.9
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 1.2e-146 524.2 503 53.7
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 2.0e-146 523.5 523 53.7
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 5.8e-146 521.9 503 53.7
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 9.9e-146 521.2 515 53.6
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 7.1e-144 515.0 502 53.4
VMungo0647G1179 Vigna mungo HOM05D004500 ORTHO05D005775 5.6e-141 505.4 441 58.7
COL.COLO4_06618 Corchorus olitorius HOM05D004500 ORTHO05D005775 1.6e-140 503.8 443 58.0
Os12g0148400 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 1.5e-130 470.7 491 50.5
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 1.1e-128 464.5 546 46.3
HPP92_022829 Vanilla planifolia HOM05D004500 ORTHO05D005775 1.7e-121 440.7 403 56.1
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 4.6e-119 432.6 499 47.9
Haze_23272 Corylus avellana HOM05D004500 ORTHO05D005775 3.1e-115 419.9 441 53.3
SEGI_21027 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 1.5e-106 391.0 207 95.2
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 6.3e-100 369.0 461 44.0
FAN21G2043 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.7e-89 334.3 358 51.1
CDE02G1339 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 8.8e-86 322.0 502 40.4
Solyc11g062310.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 3.9e-73 280.0 232 59.5
PSO339G3895 Papaver somniferum HOM05D004500 ORTHO05D005775 2.5e-72 277.3 200 67.0
Peaxi162Scf00029g02523 Petunia axillaris HOM05D004500 ORTHO05D005775 2.8e-71 273.9 277 51.3
MCO04G062 Micromonas commoda HOM05D004500 ORTHO05D005775 2.3e-70 270.8 543 33.1
Solyc11g062320.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 2.2e-68 264.2 283 49.8
Cre04.g217935 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 3.7e-68 263.5 711 30.0
Nitab4.5_0002026g0160 Nicotiana tabacum HOM05D004500 ORTHO05D005775 1.9e-67 261.2 276 50.4
Peaxi162Scf00029g02524 Petunia axillaris HOM05D004500 ORTHO05D005775 1.2e-66 258.5 200 63.5
PRCOL_00001646 Prasinoderma coloniale HOM05D004500 ORTHO05D005775 7.8e-66 255.8 570 32.8
Gohir.A09G108500 Gossypium hirsutum HOM05D004500 ORTHO05D005775 1.2e-55 221.9 176 61.4
Hma1.2p1_0460F.1_g157660 Hydrangea macrophylla HOM05D004500 ORTHO05D005775 9.2e-51 205.7 183 57.4
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 4.3e-48 196.8 337 38.3
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 7.8e-42 176.0 461 29.9
Gohir.A09G108566 Gossypium hirsutum HOM05D004500 ORTHO05D005775 5.1e-41 173.3 162 57.4
PSO339G2400 Papaver somniferum HOM05D004500 ORTHO05D005775 6.9e-38 162.9 274 38.7
SEGI_00784 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 9.9e-37 159.1 83 94.0
EL10Ac5g11937 Beta vulgaris HOM05D004500 ORTHO05D005775 9.3e-35 152.5 188 43.6
Thhalv10012226m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 1.6e-34 151.8 330 34.8
vmacro04083 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 1.5e-32 145.2 147 53.7
BcaC01g01445 Brassica carinata HOM05D004500 ORTHO05D005775 2.1e-31 141.4 136 54.4
Thecc.09G254300 Theobroma cacao HOM05D004500 ORTHO05D005775 2.1e-26 124.8 92 65.2
DCAR_023834 Daucus carota HOM05D004500 ORTHO05D005775 3.0e-25 120.9 92 64.1
SEGI_16541 Sequoiadendron giganteum HOM05D004500 ORTHO05D011045 1.1e-24 119.0 57 96.5
Lj1A1068G47 Lonicera japonica HOM05D004500 ORTHO05D005775 1.4e-19 102.1 78 65.4
Lj1A1068G46 Lonicera japonica HOM05D001538 ORTHO05D011045 8.7e-17 92.8 93 51.6
SEGI_07125 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 3.3e-16 90.9 114 46.5
HPP92_022828 Vanilla planifolia HOM05D004500 ORTHO05D005775 2.4e-14 84.7 72 62.5
Cfa026787 Carpinus fangiana HOM05D004500 ORTHO05D005775 2.1e-10 71.6 443 20.3
EL10Ac5g12062 Beta vulgaris HOM05D004500 ORTHO05D005775 1.1e-06 59.3 55 50.9


User provided reference genes

Program Settings