Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37303 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 1.7e-70 269.2 135 100.0
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 1.4e-13 80.1 106 42.5
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 4.3e-10 68.6 75 45.3
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 1.3e-09 67.0 87 42.5
Gohir.A04G071700 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.8e-09 65.9 74 48.6
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.8e-09 65.9 74 48.6
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 2.8e-09 65.9 74 48.6
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 3.7e-09 65.5 74 47.3
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 4.8e-09 65.1 74 43.2
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 6.2e-09 64.7 74 44.6
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 8.2e-09 64.3 76 43.4
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 1.1e-08 63.9 74 44.6
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 1.4e-08 63.5 87 40.2
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 1.8e-08 63.2 108 37.0
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 1.8e-08 63.2 108 37.0
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 1.8e-08 63.2 73 46.6
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.8e-08 63.2 74 43.2
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 2.4e-08 62.8 75 45.3
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 2.4e-08 62.8 77 45.5
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 2.4e-08 62.8 110 35.5
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 2.4e-08 62.8 108 37.0
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 2.4e-08 62.8 110 35.5
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 2.4e-08 62.8 110 36.4
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 2.4e-08 62.8 110 36.4
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 3.1e-08 62.4 75 40.0
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 3.1e-08 62.4 78 42.3
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 3.1e-08 62.4 87 39.1
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 4.0e-08 62.0 75 38.7
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 4.0e-08 62.0 75 40.0
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 4.0e-08 62.0 75 38.7
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 4.0e-08 62.0 110 36.4
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 5.3e-08 61.6 75 38.7
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 5.3e-08 61.6 74 41.9
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 5.3e-08 61.6 73 45.2
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 6.9e-08 61.2 75 38.7
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 6.9e-08 61.2 74 43.2
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 6.9e-08 61.2 75 41.3
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 6.9e-08 61.2 87 37.9
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 9.0e-08 60.8 73 42.5
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 9.0e-08 60.8 75 38.7
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 9.0e-08 60.8 75 38.7
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 9.0e-08 60.8 110 33.6
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 9.0e-08 60.8 74 44.6
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 9.0e-08 60.8 75 41.3
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 1.5e-07 60.1 74 40.5
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 1.5e-07 60.1 104 36.5
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 1.5e-07 60.1 74 43.2
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 2.0e-07 59.7 75 38.7
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 2.0e-07 59.7 74 41.9
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 2.0e-07 59.7 84 41.7
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 2.6e-07 59.3 75 41.3
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 3.4e-07 58.9 110 32.7
PGSC0003DMG400003892 Solanum tuberosum HOM05D004402 ORTHO05D005314 3.4e-07 58.9 75 40.0
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 4.5e-07 58.5 73 43.8
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 4.5e-07 58.5 74 41.9
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 4.5e-07 58.5 75 41.3
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 4.5e-07 58.5 75 41.3
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 5.8e-07 58.2 106 34.0
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 5.8e-07 58.2 84 44.0
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 5.8e-07 58.2 76 43.4
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 5.8e-07 58.2 74 44.6
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 5.8e-07 58.2 110 35.5
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 5.8e-07 58.2 74 41.9
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 7.6e-07 57.8 71 42.3
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 7.6e-07 57.8 75 40.0
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 7.6e-07 57.8 73 42.5
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 1.0e-06 57.4 84 42.9
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 1.0e-06 57.4 73 42.5
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 1.3e-06 57.0 111 36.9
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 1.3e-06 57.0 75 40.0
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 1.3e-06 57.0 75 38.7
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 1.3e-06 57.0 75 38.7
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 1.7e-06 56.6 76 40.8
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.7e-06 56.6 74 40.5
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 1.7e-06 56.6 111 36.0
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 2.2e-06 56.2 73 42.5
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 2.2e-06 56.2 72 41.7
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 2.2e-06 56.2 106 34.9
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 2.2e-06 56.2 73 42.5
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 2.9e-06 55.8 74 40.5
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.9e-06 55.8 74 40.5
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 2.9e-06 55.8 74 40.5
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.9e-06 55.8 107 30.8
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 2.9e-06 55.8 106 36.8
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 3.8e-06 55.5 85 37.6
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 3.8e-06 55.5 101 35.6
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 3.8e-06 55.5 75 36.0
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla HOM05D004402 ORTHO05D005314 4.9e-06 55.1 84 38.1
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 4.9e-06 55.1 84 38.1
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 6.5e-06 54.7 74 40.5
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 6.5e-06 54.7 74 40.5
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 6.5e-06 54.7 113 33.6
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 6.5e-06 54.7 113 33.6
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 6.5e-06 54.7 74 40.5


User provided reference genes

Program Settings