Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37270 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 5.1e-50 200.7 94 100.0
SEGI_25009 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 2.7e-19 98.6 53 86.8
SEGI_18111 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 1.6e-11 72.8 43 81.4
SEGI_08400 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 3.0e-10 68.6 43 76.7
SEGI_33309 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 1.1e-09 66.6 43 69.8
AagrBONN_evm.TU.Sc2ySwM_362.1171 Anthoceros agrestis HOM05D000498 ORTHO05D000354 2.8e-08 62.0 42 64.3
SEGI_12908 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 2.8e-08 62.0 54 55.6
SEGI_18372 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 3.7e-08 61.6 51 54.9
SEGI_27004 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 4.8e-08 61.2 57 50.9
SEGI_38651 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 4.8e-08 61.2 51 56.9
SEGI_01792 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 1.1e-07 60.1 51 52.9
Pp3c15_23900 Physcomitrium patens HOM05D000498 ORTHO05D000354 1.4e-07 59.7 42 61.9
Pp3c3_31590 Physcomitrium patens HOM05D000498 ORTHO05D000354 1.4e-07 59.7 42 61.9
SEGI_02250 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 1.4e-07 59.7 51 56.9
SEGI_23013 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 1.8e-07 59.3 51 52.9
SEGI_31252 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 1.8e-07 59.3 65 46.2
SEGI_33087 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 1.8e-07 59.3 51 52.9
Pp3c23_20550 Physcomitrium patens HOM05D000498 ORTHO05D000354 2.4e-07 58.9 42 61.9
SEGI_14016 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 2.4e-07 58.9 51 54.9
Lj6g0021629 Lotus japonicus HOM05D000498 ORTHO05D000354 4.1e-07 58.2 45 55.6
Lalb_Chr07g0189071 Lupinus albus HOM05D000498 ORTHO05D000354 4.1e-07 58.2 45 57.8
Phvul.006G023400 Phaseolus vulgaris HOM05D000498 ORTHO05D000354 4.1e-07 58.2 80 41.2
SEGI_04326 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 4.1e-07 58.2 51 52.9
SEGI_27645 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 4.1e-07 58.2 43 60.5
SEGI_23518 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 5.3e-07 57.8 42 61.9
SEGI_40567 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 5.3e-07 57.8 46 56.5
VMungo0331G1078 Vigna mungo HOM05D000498 ORTHO05D000354 6.9e-07 57.4 79 38.0
Pp3c17_6090 Physcomitrium patens HOM05D000498 ORTHO05D000354 9.1e-07 57.0 42 57.1
SEGI_39078 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 9.1e-07 57.0 51 52.9
ATR0763G109 Amborella trichopoda HOM05D000498 ORTHO05D000354 1.2e-06 56.6 42 59.5
CiPaw.04G049300 Carya illinoinensis HOM05D000498 ORTHO05D000354 1.2e-06 56.6 42 61.9
SEGI_31289 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 1.2e-06 56.6 42 61.9
GSVIVG01020832001 Vitis vinifera HOM05D000498 ORTHO05D000354 1.2e-06 56.6 42 57.1
MBI01_g18817_MAGBIO Magnolia biondii HOM05D000498 ORTHO05D000354 1.5e-06 56.2 45 55.6
MBI01_g36035_MAGBIO Magnolia biondii HOM05D000498 ORTHO05D000354 1.5e-06 56.2 45 55.6
Mapoly0141s0017 Marchantia polymorpha HOM05D000498 ORTHO05D000354 1.5e-06 56.2 42 57.1
Pp3c15_5310 Physcomitrium patens HOM05D000498 ORTHO05D000354 1.5e-06 56.2 50 52.0
Pp3c17_5790 Physcomitrium patens HOM05D000498 ORTHO05D000354 1.5e-06 56.2 42 59.5
SEGI_28664 Sequoiadendron giganteum HOM05D006046 ORTHO05D007580 1.5e-06 56.2 27 88.9
TWI74G0033 Tripterygium wilfordii HOM05D000498 ORTHO05D000354 1.5e-06 56.2 42 59.5
Glyma.08G306800 Glycine max HOM05D000498 ORTHO05D000354 2.0e-06 55.8 45 53.3
Pp3c12_16890 Physcomitrium patens HOM05D000498 ORTHO05D000354 2.0e-06 55.8 44 52.3
SEGI_01610 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 2.0e-06 55.8 55 49.1
SEGI_08673 Sequoiadendron giganteum HOM05D000049 ORTHO05D005570 2.0e-06 55.8 29 82.8
SEGI_11175 Sequoiadendron giganteum HOM05D007202 ORTHO05D009125 2.0e-06 55.8 28 82.1
Actinidia32509 Actinidia chinensis HOM05D000498 ORTHO05D000354 2.6e-06 55.5 42 57.1
Aqoxy1G01564 Aquilegia oxysepala HOM05D000498 ORTHO05D000354 2.6e-06 55.5 42 57.1
Mapoly0524s0002 Marchantia polymorpha HOM05D000498 ORTHO05D000354 2.6e-06 55.5 42 59.5
PSO063G2862 Papaver somniferum HOM05D000498 ORTHO05D000354 2.6e-06 55.5 42 59.5
PSO170G0251 Papaver somniferum HOM05D000498 ORTHO05D000354 2.6e-06 55.5 42 59.5
PSO782G4729 Papaver somniferum HOM05D000498 ORTHO05D000354 2.6e-06 55.5 42 59.5
Rhsim12G0012900 Rhododendron simsii HOM05D000498 ORTHO05D000354 2.6e-06 55.5 42 57.1
Eucgr.K01231 Eucalyptus grandis HOM05D000498 ORTHO05D000354 3.4e-06 55.1 42 57.1
Eucgr.K01234 Eucalyptus grandis HOM05D000498 ORTHO05D000354 3.4e-06 55.1 43 53.5
Eucgr.K01237 Eucalyptus grandis HOM05D000498 ORTHO05D000354 3.4e-06 55.1 43 53.5
FvH4_6g38760 Fragaria vesca HOM05D000498 ORTHO05D000354 3.4e-06 55.1 45 51.1
FAN05G1527 Fragaria x ananassa HOM05D000498 ORTHO05D000354 3.4e-06 55.1 45 51.1
FAN09G1486 Fragaria x ananassa HOM05D000498 ORTHO05D000354 3.4e-06 55.1 45 51.1
FAN09G2564 Fragaria x ananassa HOM05D000498 ORTHO05D000354 3.4e-06 55.1 45 51.1
FAN14G1005 Fragaria x ananassa HOM05D000498 ORTHO05D000354 3.4e-06 55.1 45 51.1
Lsat_1_v5_gn_7_30140 Lactuca sativa HOM05D000498 ORTHO05D000354 3.4e-06 55.1 42 54.8
Phvul.006G020800 Phaseolus vulgaris HOM05D000498 ORTHO05D000354 3.4e-06 55.1 45 53.3
RcHm_v2.0_Chr2g0152311 Rosa chinensis HOM05D000498 ORTHO05D000354 3.4e-06 55.1 45 51.1
TAR626G0992 Trochodendron aralioides HOM05D000498 ORTHO05D000354 3.4e-06 55.1 45 53.3
BcaC05g30527 Brassica carinata HOM05D000498 ORTHO05D000354 4.5e-06 54.7 42 59.5
A05p44000 Brassica napus HOM05D000498 ORTHO05D000354 4.5e-06 54.7 42 59.5
BraSC90t46710Z Brassica rapa HOM05D000498 ORTHO05D000354 4.5e-06 54.7 42 59.5
PSO170G3357 Papaver somniferum HOM05D000498 ORTHO05D000354 4.5e-06 54.7 42 59.5
GSVIVG01020831001 Vitis vinifera HOM05D000498 ORTHO05D000354 4.5e-06 54.7 45 51.1
BcaB06g28389 Brassica carinata HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 57.1
BcaB06g28455 Brassica carinata HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 57.1
A04p23570 Brassica napus HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 57.1
C04p60000 Brassica napus HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 57.1
BolC4t27502H Brassica oleracea HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 57.1
BraA04t17883Z Brassica rapa HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 57.1
Carub.0006s1541 Capsella rubella HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 59.5
CARHR124340 Cardamine hirsuta HOM05D000498 ORTHO05D000354 5.9e-06 54.3 46 52.2
Ca_06260_v3 Cicer arietinum L. HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 53.3
Ca_14587_v3 Cicer arietinum L. HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 51.1
Glyma.18G111200 Glycine max HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 51.1
Lj6g0011143 Lotus japonicus HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 51.1
MD17G1133800 Malus domestica HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 51.1
MD17G1134300 Malus domestica HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 51.1
MD17G1272100 Malus domestica HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 59.5
Medtr3g450930 Medicago truncatula HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 51.1
Psat5g198400 Pisum sativum HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 51.1
Sp4g13320 Schrenkiella parvula HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 57.1
SEGI_00450 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 5.9e-06 54.3 51 52.9
TPR.G18432 Trifolium pratense HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 53.3
TPR.G25279 Trifolium pratense HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 54.8
vmacro08739 Vaccinium macrocarpon HOM05D000498 ORTHO05D000354 5.9e-06 54.3 42 54.8
VMungo0540G0034 Vigna mungo HOM05D000498 ORTHO05D000354 5.9e-06 54.3 45 51.1
arahy.Tifrunner.gnm1.ann1.CRBY30 Arachis hypogaea HOM05D000498 ORTHO05D000354 7.7e-06 53.9 45 53.3
FAN02G3190 Fragaria x ananassa HOM05D000498 ORTHO05D000354 7.7e-06 53.9 45 48.9
Gohir.A07G074300 Gossypium hirsutum HOM05D000498 ORTHO05D000354 7.7e-06 53.9 42 57.1
Gohir.D07G079000 Gossypium hirsutum HOM05D000498 ORTHO05D000354 7.7e-06 53.9 42 57.1
Gorai.001G083600 Gossypium raimondii HOM05D000498 ORTHO05D000354 7.7e-06 53.9 42 57.1
Lalb_Chr10g0106531 Lupinus albus HOM05D000498 ORTHO05D000354 7.7e-06 53.9 42 54.8
Medtr3g450790 Medicago truncatula HOM05D000498 ORTHO05D000354 7.7e-06 53.9 45 51.1
Prupe.3G178100 Prunus persica HOM05D000498 ORTHO05D000354 7.7e-06 53.9 45 51.1
Sp3g02230 Schrenkiella parvula HOM05D000498 ORTHO05D000354 7.7e-06 53.9 42 59.5
VMungo0540G2196 Vigna mungo HOM05D000498 ORTHO05D000354 7.7e-06 53.9 42 59.5


User provided reference genes

Program Settings