Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 4.1e-76 288.1 159 100.0
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 4.4e-30 135.2 113 71.7
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 4.1e-28 128.6 114 68.4
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 7.8e-27 124.4 138 54.3
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 1.7e-26 123.2 86 83.7
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 2.3e-26 122.9 116 64.7
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 2.3e-26 122.9 114 66.7
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.3e-26 122.9 98 71.4
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 3.0e-26 122.5 98 71.4
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 3.0e-26 122.5 93 75.3
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 3.0e-26 122.5 134 59.0
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 3.9e-26 122.1 98 73.5
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 5.1e-26 121.7 114 49.1
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 5.1e-26 121.7 118 64.4
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 5.1e-26 121.7 101 74.3
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 5.1e-26 121.7 110 71.8
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 5.1e-26 121.7 107 69.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 6.6e-26 121.3 96 77.1
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 6.6e-26 121.3 93 71.0
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 8.6e-26 120.9 99 72.7
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 8.6e-26 120.9 88 79.5
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-25 120.6 101 69.3
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-25 120.6 101 69.3
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-25 120.6 101 71.3
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-25 120.6 101 71.3
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.1e-25 120.6 88 80.7
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.1e-25 120.6 90 78.9
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 1.1e-25 120.6 123 62.6
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.9e-25 119.8 101 68.3
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 2.5e-25 119.4 89 77.5
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 2.5e-25 119.4 88 78.4
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 3.3e-25 119.0 90 78.9
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 3.3e-25 119.0 104 73.1
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.3e-25 119.0 88 78.4
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 3.3e-25 119.0 90 78.9
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 3.3e-25 119.0 94 75.5
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 4.3e-25 118.6 88 77.3
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 4.3e-25 118.6 88 77.3
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 4.3e-25 118.6 124 58.1
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 4.3e-25 118.6 99 71.7
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 4.3e-25 118.6 90 78.9
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 4.3e-25 118.6 107 69.2
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 5.6e-25 118.2 94 77.7
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 5.6e-25 118.2 88 76.1
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 5.6e-25 118.2 90 78.9
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 5.6e-25 118.2 98 71.4
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 5.6e-25 118.2 98 71.4
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 7.3e-25 117.9 104 72.1
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 7.3e-25 117.9 104 72.1
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 7.3e-25 117.9 88 77.3
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 9.6e-25 117.5 89 79.8
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 9.6e-25 117.5 90 76.7
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 9.6e-25 117.5 106 69.8
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 9.6e-25 117.5 104 71.2
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.2e-24 117.1 104 72.1
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.2e-24 117.1 104 72.1
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.2e-24 117.1 104 72.1
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.2e-24 117.1 90 75.6
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.2e-24 117.1 129 58.9
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.6e-24 116.7 88 78.4
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.6e-24 116.7 88 78.4
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.6e-24 116.7 88 78.4
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 1.6e-24 116.7 106 69.8
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.8e-24 115.9 113 65.5
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 2.8e-24 115.9 100 73.0
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.8e-24 115.9 90 76.7
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.8e-24 115.9 101 69.3
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 2.8e-24 115.9 90 77.8
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.8e-24 115.9 88 79.5
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 3.6e-24 115.5 96 74.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 3.6e-24 115.5 96 74.0
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 3.6e-24 115.5 93 71.0
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 3.6e-24 115.5 89 77.5
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 3.6e-24 115.5 89 78.7
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 3.6e-24 115.5 95 72.6
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 3.6e-24 115.5 143 55.9
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 4.7e-24 115.2 90 71.1
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 4.7e-24 115.2 99 73.7
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 6.2e-24 114.8 108 65.7
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 8.1e-24 114.4 100 72.0
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 8.1e-24 114.4 98 74.5
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 8.1e-24 114.4 106 68.9
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 8.1e-24 114.4 119 62.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 1.4e-23 113.6 98 71.4
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.4e-23 113.6 92 77.2
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 2.4e-23 112.8 98 71.4
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 5.2e-23 111.7 100 71.0
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 6.8e-23 111.3 86 80.2
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.2e-22 110.5 126 62.7
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 3.4e-22 109.0 98 69.4
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 3.4e-22 109.0 88 75.0
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 4.4e-22 108.6 101 67.3
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 7.6e-22 107.8 90 74.4
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.3e-21 107.1 88 76.1
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 1.3e-21 107.1 119 60.5
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 3.8e-21 105.5 63 73.0
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 4.9e-21 105.1 83 74.7
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.9e-20 103.2 77 81.8
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 3.2e-20 102.4 58 70.7
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 5.4e-20 101.7 85 74.1
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 9.3e-20 100.9 118 54.2
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 9.3e-20 100.9 77 76.6
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 2.3e-18 96.3 73 79.5
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.5e-17 93.6 73 74.0


User provided reference genes

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