Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 3.0e-154 548.5 288 100.0
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 4.8e-99 365.2 288 65.6
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 1.8e-98 363.2 287 63.8
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 1.8e-98 363.2 283 66.1
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 4.0e-98 362.1 288 62.2
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 6.9e-98 361.3 288 64.6
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 4.5e-97 358.6 288 62.2
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 1.3e-96 357.1 288 62.2
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 1.3e-96 357.1 287 63.1
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 8.4e-96 354.4 284 64.4
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 1.1e-95 354.0 288 61.1
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 1.4e-95 353.6 288 60.8
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 1.9e-95 353.2 288 61.1
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 1.9e-95 353.2 288 61.5
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 5.5e-95 351.7 288 61.5
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 7.1e-95 351.3 288 62.2
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 7.1e-95 351.3 288 61.1
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 9.3e-95 350.9 288 60.4
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 1.2e-94 350.5 279 63.1
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 1.6e-94 350.1 282 62.4
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 3.5e-94 349.0 288 61.5
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 4.6e-94 348.6 288 62.5
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 6.0e-94 348.2 288 60.4
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 6.0e-94 348.2 288 62.5
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 1.0e-93 347.4 288 60.4
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 1.3e-93 347.1 288 60.1
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 1.8e-93 346.7 283 62.2
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 1.8e-93 346.7 288 60.4
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 2.3e-93 346.3 282 62.4
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 3.9e-93 345.5 278 62.6
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 3.9e-93 345.5 288 62.8
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 5.1e-93 345.1 278 61.9
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 5.1e-93 345.1 288 60.8
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 6.7e-93 344.7 278 61.5
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 6.7e-93 344.7 284 62.7
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 8.7e-93 344.4 288 63.5
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 8.7e-93 344.4 278 61.5
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 8.7e-93 344.4 278 61.5
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 8.7e-93 344.4 278 61.5
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 8.7e-93 344.4 288 60.8
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 8.7e-93 344.4 278 61.9
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 1.1e-92 344.0 283 60.4
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 1.1e-92 344.0 278 62.6
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 1.5e-92 343.6 283 61.5
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 2.5e-92 342.8 288 60.1
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 3.3e-92 342.4 282 60.3
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 9.6e-92 340.9 288 61.8
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 9.6e-92 340.9 282 59.6
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 1.6e-91 340.1 288 60.8
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 1.6e-91 340.1 288 60.1
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 1.6e-91 340.1 288 59.4
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 2.1e-91 339.7 282 59.9
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 2.1e-91 339.7 288 59.4
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 2.1e-91 339.7 288 60.1
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 3.7e-91 339.0 286 62.9
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 3.7e-91 339.0 288 60.4
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 4.8e-91 338.6 279 62.4
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 6.2e-91 338.2 288 60.8
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 6.2e-91 338.2 288 60.1
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 8.1e-91 337.8 279 60.9
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.4e-90 337.0 264 64.0
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 1.4e-90 337.0 288 59.4
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 1.4e-90 337.0 288 60.1
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 2.4e-90 336.3 279 60.6
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 3.1e-90 335.9 249 67.5
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 6.9e-90 334.7 284 61.6
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 9.0e-90 334.3 285 59.6
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 1.2e-89 334.0 285 59.6
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 4.5e-89 332.0 285 59.6
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 4.5e-89 332.0 288 59.7
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 5.8e-89 331.6 288 58.7
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 7.6e-89 331.3 278 61.2
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 1.7e-88 330.1 284 59.5
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 1.7e-88 330.1 285 59.3
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 2.2e-88 329.7 279 59.5
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 2.2e-88 329.7 288 60.1
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 2.9e-88 329.3 283 59.0
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 1.9e-87 326.6 283 59.4
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 4.2e-87 325.5 250 64.4
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 7.1e-87 324.7 288 59.0
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 2.1e-86 323.2 282 57.4
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 2.1e-86 323.2 283 58.3
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 2.1e-86 323.2 288 58.0
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 4.6e-86 322.0 284 58.5
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 4.6e-86 322.0 271 61.3
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 1.0e-85 320.9 279 58.1
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 1.8e-85 320.1 283 57.6
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 2.3e-85 319.7 288 56.6
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 1.6e-83 313.5 236 64.4
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.8e-82 310.1 249 61.8
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 3.4e-81 305.8 288 55.9
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 4.5e-81 305.4 348 50.0
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 5.9e-81 305.1 322 50.9
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 7.6e-81 304.7 322 53.1
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 2.9e-80 302.8 288 54.2
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 3.0e-77 292.7 181 84.0
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 3.9e-77 292.4 247 59.5
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 8.7e-77 291.2 236 62.3
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 2.9e-72 276.2 301 51.8
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 5.0e-72 275.4 221 61.5
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 5.7e-68 261.9 196 65.8
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 3.1e-66 256.1 200 61.5
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 2.5e-63 246.5 288 49.0
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 9.7e-60 234.6 181 74.6
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 1.0e-56 224.6 224 53.6
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 6.5e-56 221.9 189 68.3
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 3.6e-54 216.1 331 41.4
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 1.0e-53 214.5 292 44.9
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 2.6e-52 209.9 281 45.2
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 4.5e-49 199.1 143 69.9
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 1.5e-44 184.1 206 49.0
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 6.1e-38 162.2 322 38.2
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 1.2e-33 147.9 180 46.7
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 1.2e-30 137.9 117 60.7
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 1.6e-30 137.5 114 61.4
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 4.0e-29 132.9 129 52.7
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 4.3e-23 112.8 167 38.3
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 4.7e-22 109.4 90 61.1
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 1.9e-18 97.4 58 87.9
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 4.6e-17 92.8 58 82.8
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 3.0e-16 90.1 92 52.2
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 1.3e-08 64.7 142 35.9
Ca_03931_v3 Cicer arietinum L. HOM05D005699 ORTHO05D007496 5.6e-07 59.3 221 29.4
Os01g0729100 Oryza sativa ssp. japonica HOM05D005699 ORTHO05D007496 7.3e-07 58.9 269 27.9
Ah.04g164050 Amaranthus hybridus HOM05D005699 ORTHO05D007496 9.5e-07 58.5 222 28.4
Potri.001G384300 Populus trichocarpa HOM05D005699 ORTHO05D007496 3.6e-06 56.6 222 27.9
Lalb_Chr20g0109131 Lupinus albus HOM05D005699 ORTHO05D007496 8.1e-06 55.5 222 31.1


User provided reference genes

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