Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 6.1e-49 197.2 102 100.0
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 2.0e-28 129.0 88 75.0
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 5.9e-28 127.5 86 73.3
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 7.7e-28 127.1 86 73.3
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 7.7e-28 127.1 86 73.3
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 7.7e-28 127.1 86 72.1
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 7.7e-28 127.1 88 70.5
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 7.7e-28 127.1 86 74.4
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 1.0e-27 126.7 88 71.6
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 1.0e-27 126.7 88 73.9
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.0e-27 126.7 86 74.4
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 1.0e-27 126.7 86 72.1
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.3e-27 126.3 86 73.3
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 1.3e-27 126.3 86 73.3
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.7e-27 125.9 88 72.7
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 2.3e-27 125.6 88 70.5
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 2.3e-27 125.6 86 69.8
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 2.9e-27 125.2 88 72.7
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 2.9e-27 125.2 88 69.3
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 2.9e-27 125.2 88 69.3
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 2.9e-27 125.2 86 70.9
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 3.8e-27 124.8 86 70.9
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 3.8e-27 124.8 88 68.2
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 3.8e-27 124.8 86 70.9
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 3.8e-27 124.8 86 70.9
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 5.0e-27 124.4 88 67.0
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 5.0e-27 124.4 86 69.8
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 5.0e-27 124.4 88 71.6
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 5.0e-27 124.4 86 72.1
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 5.0e-27 124.4 86 72.1
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 6.5e-27 124.0 88 68.2
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 6.5e-27 124.0 88 67.0
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 6.5e-27 124.0 88 69.3
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 6.5e-27 124.0 88 69.3
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 6.5e-27 124.0 86 73.3
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 6.5e-27 124.0 86 70.9
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 1.1e-26 123.2 86 70.9
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.1e-26 123.2 88 68.2
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.5e-26 122.9 88 68.2
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.5e-26 122.9 88 68.2
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 1.5e-26 122.9 88 65.9
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 1.5e-26 122.9 86 70.9
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.9e-26 122.5 86 68.6
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 1.9e-26 122.5 88 68.2
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.9e-26 122.5 88 67.0
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.9e-26 122.5 86 69.8
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 2.5e-26 122.1 88 68.2
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 2.5e-26 122.1 88 69.3
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 2.5e-26 122.1 88 69.3
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 2.5e-26 122.1 88 69.3
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 2.5e-26 122.1 88 69.3
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 2.5e-26 122.1 88 69.3
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 2.5e-26 122.1 88 69.3
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 2.5e-26 122.1 86 67.4
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 2.5e-26 122.1 86 67.4
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 2.5e-26 122.1 88 69.3
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 3.3e-26 121.7 86 68.6
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 4.2e-26 121.3 86 68.6
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 5.5e-26 120.9 88 68.2
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 7.2e-26 120.6 88 68.2
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 7.2e-26 120.6 86 67.4
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 7.2e-26 120.6 86 68.6
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 9.5e-26 120.2 88 67.0
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 9.5e-26 120.2 88 67.0
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 1.2e-25 119.8 88 65.9
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 1.2e-25 119.8 88 67.0
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.2e-25 119.8 88 67.0
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.2e-25 119.8 86 69.8
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 1.2e-25 119.8 88 64.8
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 1.6e-25 119.4 88 67.0
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 1.6e-25 119.4 88 65.9
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 2.1e-25 119.0 88 65.9
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 2.1e-25 119.0 86 67.4
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 2.1e-25 119.0 86 69.8
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 2.8e-25 118.6 88 65.9
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 2.8e-25 118.6 84 71.4
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.8e-25 118.6 88 67.0
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 2.8e-25 118.6 86 67.4
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 2.8e-25 118.6 88 64.8
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 3.6e-25 118.2 86 66.3
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 3.6e-25 118.2 86 68.6
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 4.7e-25 117.9 88 64.8
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 4.7e-25 117.9 88 67.0
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 4.7e-25 117.9 86 66.3
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 6.1e-25 117.5 85 67.1
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 6.1e-25 117.5 81 71.6
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 8.0e-25 117.1 86 66.3
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 8.0e-25 117.1 86 66.3
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 8.0e-25 117.1 86 66.3
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 8.0e-25 117.1 86 66.3
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 8.0e-25 117.1 86 66.3
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 1.0e-24 116.7 87 69.0
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.0e-24 116.7 88 63.6
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 1.0e-24 116.7 86 65.1
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 1.4e-24 116.3 88 65.9
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 2.3e-24 115.5 86 64.0
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 3.0e-24 115.2 85 65.9
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 3.0e-24 115.2 86 66.3
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 6.8e-24 114.0 82 69.5
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 6.8e-24 114.0 86 67.4
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 1.2e-23 113.2 86 64.0
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 6.3e-22 107.5 88 61.4
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 8.3e-22 107.1 88 60.2
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 8.3e-22 107.1 88 56.8
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 8.3e-22 107.1 88 56.8
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 4.1e-21 104.8 87 56.3
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 4.1e-21 104.8 87 56.3
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 1.2e-20 103.2 89 57.3
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.9e-19 98.6 88 56.8
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 5.0e-19 97.8 88 59.1
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 4.7e-17 91.3 87 54.0
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 6.1e-17 90.9 70 64.3
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 6.1e-17 90.9 64 73.4
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 4.1e-13 78.2 80 47.5
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 5.4e-13 77.8 89 49.4
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-10 69.3 87 40.2
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 7.3e-10 67.4 50 70.0
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 5.2e-08 61.2 38 68.4
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 6.8e-08 60.8 83 38.6


User provided reference genes

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