Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37162 Sequoiadendron giganteum HOM05D015783 ORTHO05D021004 0.0e+00 2591.6 1397 100.0
SEGI_39829 Sequoiadendron giganteum HOM05D015783 ORTHO05D021004 2.1e-14 86.3 203 32.5
Aqoxy3G03583 Aquilegia oxysepala HOM05D005220 ORTHO05D006082 1.8e-10 73.2 319 24.5
SEGI_11425 Sequoiadendron giganteum HOM05D015783 ORTHO05D021004 1.8e-10 73.2 374 23.8
SEGI_30657 Sequoiadendron giganteum HOM05D015783 ORTHO05D021004 1.8e-10 73.2 374 23.8
SEGI_34434 Sequoiadendron giganteum HOM05D015783 ORTHO05D021004 1.8e-10 73.2 374 23.8
Ah.11g047990 Amaranthus hybridus HOM05D005220 ORTHO05D006082 6.9e-10 71.2 340 23.5
Nn1g05634 Nelumbo nucifera HOM05D000650 ORTHO05D000735 6.9e-10 71.2 436 21.1
Sed0005854 Sechium edule HOM05D005220 ORTHO05D006082 2.0e-09 69.7 321 23.7
Hund02603 Selenicereus undatus HOM05D005220 ORTHO05D006082 1.7e-08 66.6 330 24.8
Peaxi162Scf00629g00420 Petunia axillaris HOM05D005220 ORTHO05D006082 2.9e-08 65.9 250 25.6
Sc04g0003090 Simmondsia chinensis HOM05D005220 ORTHO05D006082 2.9e-08 65.9 137 26.3
AUR62021593 Chenopodium quinoa HOM05D005220 ORTHO05D006082 3.8e-08 65.5 346 23.7
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 8.4e-08 64.3 131 32.8
Phvul.008G035000 Phaseolus vulgaris HOM05D005220 ORTHO05D006082 7.1e-07 61.2 134 30.6
MELO3C017209.2 Cucumis melo HOM05D005220 ORTHO05D006082 9.3e-07 60.8 142 32.4
ATR0064G106 Amborella trichopoda HOM05D005220 ORTHO05D006082 1.2e-06 60.5 142 29.6
AUR62008499 Chenopodium quinoa HOM05D005220 ORTHO05D006082 1.2e-06 60.5 310 21.0
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 1.2e-06 60.5 141 31.9
GSVIVG01007924001 Vitis vinifera HOM05D005220 ORTHO05D006082 1.2e-06 60.5 341 22.9
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 1.6e-06 60.1 184 28.8
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.1e-06 59.7 162 25.9
vmacro01871 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 2.1e-06 59.7 154 27.9
VMungo1383G2795 Vigna mungo HOM05D005220 ORTHO05D006082 2.1e-06 59.7 144 27.1
Cpa.g.sc94.10 Carica papaya HOM05D005220 ORTHO05D006082 2.7e-06 59.3 332 22.0
ClCG06G015820 Citrullus lanatus HOM05D005220 ORTHO05D006082 2.7e-06 59.3 142 31.0
Glyma.08G242800 Glycine max HOM05D005220 ORTHO05D006082 2.7e-06 59.3 144 31.9
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 3.5e-06 58.9 169 29.6
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 3.5e-06 58.9 238 23.1
EL10Ac5g11101 Beta vulgaris HOM05D005220 ORTHO05D006082 4.6e-06 58.5 346 22.3
A04p18340 Brassica napus HOM05D012895 ORTHO05D014428 4.6e-06 58.5 125 29.6
BraA04t17445Z Brassica rapa HOM05D012895 ORTHO05D014428 4.6e-06 58.5 125 29.6
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 4.6e-06 58.5 131 30.5
CiPaw.04G057500 Carya illinoinensis HOM05D005220 ORTHO05D006082 6.0e-06 58.2 147 29.3
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 6.0e-06 58.2 150 25.3
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 6.0e-06 58.2 147 29.3
Glyma.18G265000 Glycine max HOM05D005220 ORTHO05D006082 6.0e-06 58.2 185 29.7
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 6.0e-06 58.2 181 28.2
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 6.0e-06 58.2 194 28.9
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 6.0e-06 58.2 136 31.6
ECA232G0957 Erigeron canadensis HOM05D005220 ORTHO05D006082 7.9e-06 57.8 843 21.1
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 7.9e-06 57.8 160 26.2


User provided reference genes

Program Settings