Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37091 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 0.0e+00 1161.7 621 100.0
SEGI_40784 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 3.2e-76 290.4 636 35.8
AagrBONN_evm.TU.Sc2ySwM_117.2775 Anthoceros agrestis HOM05D005042 ORTHO05D006080 8.3e-40 169.5 428 34.1
CDE10G0431 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 1.8e-39 168.3 536 32.6
ATR0827G068 Amborella trichopoda HOM05D005042 ORTHO05D006080 5.9e-38 163.3 503 32.2
Eucgr.G02425 Eucalyptus grandis HOM05D005042 ORTHO05D006080 1.4e-34 152.1 449 31.8
TAR726G0003 Trochodendron aralioides HOM05D005042 ORTHO05D006080 1.4e-34 152.1 189 50.8
Pp3c1_680 Physcomitrium patens HOM05D005042 ORTHO05D006080 4.4e-33 147.1 185 50.8
Manes.01G025000 Manihot esculenta HOM05D005042 ORTHO05D006080 5.7e-33 146.7 162 53.1
Lalb_Chr17g0341431 Lupinus albus HOM05D005042 ORTHO05D006080 7.5e-33 146.4 161 54.0
Potri.008G109100 Populus trichocarpa HOM05D005042 ORTHO05D006080 9.8e-33 146.0 162 54.3
Potri.T155180 Populus trichocarpa HOM05D005042 ORTHO05D006080 9.8e-33 146.0 162 54.3
Lj3A1027T86 Lonicera japonica HOM05D005042 ORTHO05D006080 4.9e-32 143.7 165 57.0
CiPaw.06G094600 Carya illinoinensis HOM05D005042 ORTHO05D006080 8.3e-32 142.9 165 55.2
Pp3c2_29040 Physcomitrium patens HOM05D005042 ORTHO05D006080 8.3e-32 142.9 204 51.5
Rhsim12G0071400 Rhododendron simsii HOM05D005042 ORTHO05D006080 1.1e-31 142.5 493 32.7
TAR371G1247 Trochodendron aralioides HOM05D005042 ORTHO05D006080 1.4e-31 142.1 162 53.1
Potri.010G139100 Populus trichocarpa HOM05D005042 ORTHO05D006080 4.1e-31 140.6 162 52.5
vmacro01299 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 9.2e-31 139.4 536 32.3
CANSAT11G1456 Cannabis sativa HOM05D005042 ORTHO05D006080 3.5e-30 137.5 197 44.7
Aqoxy3G03731 Aquilegia oxysepala HOM05D005042 ORTHO05D006080 7.8e-30 136.3 164 54.9
MBI16_g07040_MAGBIO Magnolia biondii HOM05D005042 ORTHO05D006080 7.8e-30 136.3 532 31.4
Lsat_1_v5_gn_3_106381 Lactuca sativa HOM05D005042 ORTHO05D006080 1.0e-29 136.0 176 51.1
Prupe.1G292900 Prunus persica HOM05D005042 ORTHO05D006080 1.7e-29 135.2 162 58.6
Hund25158 Selenicereus undatus HOM05D005042 ORTHO05D006080 2.3e-29 134.8 508 28.9
Actinidia07770 Actinidia chinensis HOM05D005042 ORTHO05D006080 3.9e-29 134.0 198 44.4
Nn4g23527 Nelumbo nucifera HOM05D005042 ORTHO05D006080 3.9e-29 134.0 162 58.6
EL10Ac6g14684 Beta vulgaris HOM05D005042 ORTHO05D006080 5.0e-29 133.7 506 27.9
Phvul.003G038600 Phaseolus vulgaris HOM05D005042 ORTHO05D006080 6.6e-29 133.3 411 32.4
Cfa008851 Carpinus fangiana HOM05D005042 ORTHO05D006080 1.5e-28 132.1 162 58.6
Dinv34024 Davidia involucrata HOM05D005042 ORTHO05D006080 2.5e-28 131.3 161 56.5
COL.COLO4_27836 Corchorus olitorius HOM05D005042 ORTHO05D006080 3.3e-28 131.0 166 51.8
Mapoly0211s0012 Marchantia polymorpha HOM05D005042 ORTHO05D006080 7.3e-28 129.8 460 33.3
Thecc.02G323700 Theobroma cacao HOM05D005042 ORTHO05D006080 9.5e-28 129.4 583 31.4
CsaV3_6G033840 Cucumis sativus L. HOM05D005042 ORTHO05D006080 1.6e-27 128.6 362 31.8
PSO017G3437 Papaver somniferum HOM05D005042 ORTHO05D006080 2.1e-27 128.3 407 31.9
MELO3C011406.2 Cucumis melo HOM05D005042 ORTHO05D006080 3.6e-27 127.5 359 31.8
CiPaw.05G122400 Carya illinoinensis HOM05D005042 ORTHO05D006080 4.7e-27 127.1 203 44.3
PSO478G2238 Papaver somniferum HOM05D005042 ORTHO05D006080 4.7e-27 127.1 418 30.4
Lj2g0019338 Lotus japonicus HOM05D005042 ORTHO05D006080 1.4e-26 125.6 167 55.1
AUR62003064 Chenopodium quinoa HOM05D005042 ORTHO05D006080 1.8e-26 125.2 397 30.7
Cc11_g11610 Coffea canephora HOM05D005042 ORTHO05D006080 1.8e-26 125.2 499 30.3
Sabra08G0082800 Salix brachista HOM05D005042 ORTHO05D006080 8.9e-26 122.9 162 54.3
Migut.E00252 Erythranthe guttata HOM05D005042 ORTHO05D006080 1.2e-25 122.5 159 50.3
TWI31G0262 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 1.5e-25 122.1 161 55.3
Lalb_Chr10g0099121 Lupinus albus HOM05D005042 ORTHO05D006080 2.0e-25 121.7 166 55.4
ECA246G3902 Erigeron canadensis HOM05D005042 ORTHO05D006080 3.4e-25 120.9 382 33.5
Oeu024162.6 Olea europaea HOM05D005042 ORTHO05D006080 3.4e-25 120.9 161 49.7
AUR62007879 Chenopodium quinoa HOM05D005042 ORTHO05D006080 7.5e-25 119.8 399 30.6
Haze_11871 Corylus avellana HOM05D005042 ORTHO05D006080 7.5e-25 119.8 201 48.8
Oeu055079.1 Olea europaea HOM05D005042 ORTHO05D006080 1.3e-24 119.0 275 38.2
HanXRQChr17g0570091 Helianthus annuus HOM05D005042 ORTHO05D006080 3.7e-24 117.5 193 44.6
HPP92_000883 Vanilla planifolia HOM05D005042 ORTHO05D006080 3.7e-24 117.5 267 39.7
TWI79G1206 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 1.4e-23 115.5 166 53.6
Glyma.02G122200 Glycine max HOM05D005042 ORTHO05D006080 2.4e-23 114.8 412 34.0
ClCG08G010560 Citrullus lanatus HOM05D005042 ORTHO05D006080 5.4e-23 113.6 394 29.9
unitig_62.g23700 Utricularia gibba HOM05D005042 ORTHO05D006080 7.0e-23 113.2 362 32.9
Aa31LG4G11790 Aethionema arabicum HOM05D005042 ORTHO05D006080 1.2e-22 112.5 212 39.2
CSS0000751 Camellia sinensis var. sinensis HOM05D005042 ORTHO05D006080 6.0e-22 110.2 165 51.5
Psat2g093520 Pisum sativum HOM05D005042 ORTHO05D006080 1.0e-21 109.4 163 49.1
Solyc05g011950.3 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.0e-21 109.4 165 45.5
AT1G69060 Arabidopsis thaliana HOM05D005042 ORTHO05D006080 1.3e-21 109.0 300 32.3
SGA_v2.0_scaffold287G47187 Striga asiatica HOM05D005042 ORTHO05D006080 1.7e-21 108.6 168 43.5
TPR.G34179 Trifolium pratense HOM05D005042 ORTHO05D006080 1.7e-21 108.6 166 50.0
VMungo1215G3453 Vigna mungo HOM05D005042 ORTHO05D006080 1.7e-21 108.6 131 53.4
Atru.chr11.1578 Acer truncatum HOM05D005042 ORTHO05D006080 2.3e-21 108.2 162 50.6
Cpa.g.sc1.165 Carica papaya HOM05D005042 ORTHO05D006080 5.0e-21 107.1 162 42.6
THA.LOC104821992 Tarenaya hassleriana HOM05D005042 ORTHO05D006080 6.6e-21 106.7 477 28.7
MD16G1056300 Malus domestica HOM05D005042 ORTHO05D006080 1.1e-20 105.9 180 47.8
Oeu021807.1 Olea europaea HOM05D005042 ORTHO05D006080 2.5e-20 104.8 166 49.4
Rhsim09G0122700 Rhododendron simsii HOM05D005042 ORTHO05D006080 4.3e-20 104.0 254 34.6
CDE10G0071 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 9.5e-20 102.8 458 28.2
Gohir.A05G306900 Gossypium hirsutum HOM05D005042 ORTHO05D006080 2.1e-19 101.7 194 44.8
Oeu057419.1 Olea europaea HOM05D005042 ORTHO05D006080 2.8e-19 101.3 169 50.3
vmacro10479 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 3.6e-19 100.9 229 36.2
Duzib251G0840 Durio zibethinus HOM05D005042 ORTHO05D006080 4.7e-19 100.5 473 30.7
PGR119G2532 Punica granatum HOM05D005042 ORTHO05D006080 1.8e-18 98.6 229 39.7
TPR.G37754 Trifolium pratense HOM05D005042 ORTHO05D006080 1.8e-18 98.6 159 41.5
Zm00001eb057530 Zea mays HOM05D005042 ORTHO05D006080 3.1e-18 97.8 161 47.8
CARHR061940 Cardamine hirsuta HOM05D005042 ORTHO05D006080 6.8e-18 96.7 156 48.1
TAR629G0517 Trochodendron aralioides HOM05D005042 ORTHO05D006080 6.8e-18 96.7 165 47.9
arahy.Tifrunner.gnm1.ann1.L0BNS4 Arachis hypogaea HOM05D005042 ORTHO05D006080 8.9e-18 96.3 111 50.5
Carub.0002s1568 Capsella rubella HOM05D005042 ORTHO05D006080 8.9e-18 96.3 452 30.1
Solyc05g011930.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.5e-17 95.5 488 29.7
PSO782G3512 Papaver somniferum HOM05D005042 ORTHO05D006080 2.0e-17 95.1 534 28.5
Gorai.009G327100 Gossypium raimondii HOM05D005042 ORTHO05D006080 3.4e-17 94.4 171 46.2
Ah.03g138660 Amaranthus hybridus HOM05D000485 ORTHO05D000341 4.4e-17 94.0 277 37.5
Sopen05g006670 Solanum pennellii HOM05D005042 ORTHO05D006080 4.4e-17 94.0 166 47.0
Os03g0752700 Oryza sativa ssp. japonica HOM05D005042 ORTHO05D006080 5.8e-17 93.6 164 47.6
Sabra10G0107300 Salix brachista HOM05D005042 ORTHO05D006080 5.8e-17 93.6 118 50.8
Gohir.D05G307200 Gossypium hirsutum HOM05D005042 ORTHO05D006080 7.5e-17 93.2 171 46.2
Medtr5g047140 Medicago truncatula HOM05D005042 ORTHO05D006080 7.5e-17 93.2 164 39.6
Ciclev10030834m.g Citrus clementina HOM05D005042 ORTHO05D006080 1.3e-16 92.4 162 47.5
CBR_g19648 Chara braunii HOM05D005042 ORTHO05D006080 2.2e-16 91.7 98 53.1
Nitab4.5_0012072g0010 Nicotiana tabacum HOM05D005042 ORTHO05D006080 2.9e-16 91.3 323 33.7
PSO063G2731 Papaver somniferum HOM05D005042 ORTHO05D006080 3.7e-16 90.9 535 28.6
PGSC0003DMG400028304 Solanum tuberosum HOM05D005042 ORTHO05D006080 4.9e-16 90.5 164 46.3
DCAR_030054 Daucus carota HOM05D005042 ORTHO05D006080 6.4e-16 90.1 425 29.9
FAN07G1705 Fragaria x ananassa HOM05D005042 ORTHO05D006080 6.4e-16 90.1 198 42.9
QL05p008217 Quercus lobata HOM05D005042 ORTHO05D006080 8.3e-16 89.7 176 37.5
Sopen05g006680 Solanum pennellii HOM05D000061 ORTHO05D000050 1.4e-15 89.0 150 42.7
MD13G1056900 Malus domestica HOM05D005042 ORTHO05D006080 2.4e-15 88.2 180 42.8
CAN.G1021.3 Capsicum annuum HOM05D005042 ORTHO05D006080 5.4e-15 87.0 482 28.8
Lsat_1_v5_gn_4_25561 Lactuca sativa HOM05D005042 ORTHO05D006080 7.1e-15 86.7 154 40.9
CAN.G1021.19 Capsicum annuum HOM05D005042 ORTHO05D006080 9.2e-15 86.3 100 47.0
Glyma.01G064400 Glycine max HOM05D005042 ORTHO05D006080 1.6e-14 85.5 158 47.5
CAN.G1021.18 Capsicum annuum HOM05D005042 ORTHO05D006080 2.1e-14 85.1 142 40.1
Ca_05058_v3 Cicer arietinum L. HOM05D005042 ORTHO05D006080 2.7e-14 84.7 162 37.0
DCAR_023741 Daucus carota HOM05D005042 ORTHO05D006080 2.7e-14 84.7 93 49.5
Peaxi162Scf00188g01341 Petunia axillaris HOM05D005042 ORTHO05D006080 2.7e-14 84.7 487 30.2
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea HOM05D005042 ORTHO05D006080 6.0e-14 83.6 494 30.2
ECA234G0547 Erigeron canadensis HOM05D005042 ORTHO05D006080 7.8e-14 83.2 202 40.6
HanXRQChr16g0527171 Helianthus annuus HOM05D005042 ORTHO05D006080 1.7e-13 82.0 201 44.3
RcHm_v2.0_Chr4g0437421 Rosa chinensis HOM05D005042 ORTHO05D006080 2.3e-13 81.6 162 42.6
GSVIVG01012257001 Vitis vinifera HOM05D005042 ORTHO05D006080 5.1e-13 80.5 162 43.2
CAN.G1021.10 Capsicum annuum HOM05D005042 ORTHO05D006080 6.6e-13 80.1 162 36.4
TPR.G38503 Trifolium pratense HOM05D005042 ORTHO05D006080 6.6e-13 80.1 441 27.9
PGSC0003DMG400028305 Solanum tuberosum HOM05D005042 ORTHO05D006080 8.6e-13 79.7 90 47.8
Solyc05g011960.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.5e-12 79.0 88 47.7
Nitab4.5_0000027g0180 Nicotiana tabacum HOM05D005042 ORTHO05D006080 2.5e-12 78.2 178 42.7
FAN17G2893 Fragaria x ananassa HOM05D005042 ORTHO05D006080 3.3e-12 77.8 200 39.0
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 3.3e-12 77.8 163 42.3
FvH4_4g29350 Fragaria vesca HOM05D005042 ORTHO05D006080 5.6e-12 77.0 248 35.5
FAN12G1549 Fragaria x ananassa HOM05D005042 ORTHO05D006080 5.6e-12 77.0 248 35.5
COL.COLO4_27818 Corchorus olitorius HOM05D005042 ORTHO05D006080 7.3e-12 76.6 514 24.5
FAN22G1919 Fragaria x ananassa HOM05D005042 ORTHO05D006080 7.3e-12 76.6 198 38.9
Sopen05g006700 Solanum pennellii HOM05D005042 ORTHO05D006080 9.5e-12 76.3 88 45.5
AL2G28110 Arabidopsis lyrata HOM05D005042 ORTHO05D006080 2.1e-11 75.1 156 42.3
Dinv15585 Davidia involucrata HOM05D005042 ORTHO05D006080 2.1e-11 75.1 66 59.1
CAN.G1021.20 Capsicum annuum HOM05D005042 ORTHO05D006080 6.2e-11 73.6 140 40.7
C06p40780 Brassica napus HOM05D005042 ORTHO05D006080 1.8e-10 72.0 160 41.2
BolC6t39355H Brassica oleracea HOM05D005042 ORTHO05D006080 1.8e-10 72.0 160 41.2
DCAR_007205 Daucus carota HOM05D005042 ORTHO05D006080 2.3e-10 71.6 171 39.8
Thhalv10018302m.g Eutrema salsugineum HOM05D005042 ORTHO05D006080 2.3e-10 71.6 527 27.1
Sc04g0007390 Simmondsia chinensis HOM05D005042 ORTHO05D006080 1.2e-09 69.3 506 26.9
CAN.G1021.24 Capsicum annuum HOM05D005042 ORTHO05D006080 1.5e-09 68.9 134 43.3
Nn3g17525 Nelumbo nucifera HOM05D005042 ORTHO05D006080 4.4e-09 67.4 89 47.2
A07p35450 Brassica napus HOM05D005042 ORTHO05D006080 3.7e-08 64.3 160 39.4
BraA07t31136Z Brassica rapa HOM05D005042 ORTHO05D006080 3.7e-08 64.3 160 39.4


User provided reference genes

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