Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 0.0e+00 1687.2 941 100.0
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.7e-103 380.9 973 41.9
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 1.8e-99 368.2 1014 36.2
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.0e-98 364.8 1001 36.5
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 1.5e-96 358.6 1000 35.6
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.8e-94 351.7 1014 35.5
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.3e-94 351.3 1014 35.3
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 3.4e-93 347.4 996 34.5
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 4.4e-93 347.1 1008 35.3
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.3e-92 345.5 997 35.7
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 7.0e-91 339.7 1002 35.2
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 2.7e-90 337.8 1008 37.0
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.1e-88 332.4 1005 35.1
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.9e-88 331.6 1000 34.4
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 1.9e-88 331.6 1006 34.9
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.2e-87 328.9 1000 34.1
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 6.1e-87 326.6 996 34.8
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 3.0e-86 324.3 992 33.1
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 2.0e-85 321.6 1014 34.5
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.6e-85 321.2 1001 33.3
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 5.7e-85 320.1 1011 32.6
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 7.5e-85 319.7 1011 32.6
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 1.3e-84 318.9 1001 34.5
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.3e-84 318.9 1003 32.8
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.2e-84 318.2 1003 32.8
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 3.7e-84 317.4 858 36.7
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 1.1e-83 315.8 1003 34.6
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 4.1e-83 313.9 1013 34.4
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 9.2e-83 312.8 999 32.5
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 1.6e-82 312.0 994 34.6
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 3.5e-82 310.8 1001 34.9
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 3.5e-82 310.8 1010 34.0
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 3.5e-82 310.8 1005 33.4
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 7.8e-82 309.7 1007 33.9
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.0e-81 309.3 1001 34.7
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.0e-81 309.3 867 34.5
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 2.3e-81 308.1 848 37.3
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 3.9e-81 307.4 992 34.5
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 8.6e-81 306.2 963 34.9
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 8.6e-81 306.2 1006 34.2
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 1.5e-80 305.4 999 32.7
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.5e-80 305.4 1113 34.4
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 9.5e-80 302.8 1008 34.4
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 1.6e-79 302.0 1003 33.4
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 4.7e-79 300.4 1007 33.0
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 6.2e-79 300.1 1006 34.7
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 6.2e-79 300.1 1012 33.6
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 1.8e-78 298.5 1003 33.9
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 5.2e-78 297.0 978 33.4
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 5.2e-78 297.0 984 36.9
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.4e-77 294.3 1005 32.6
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 1.7e-76 292.0 1044 34.6
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 2.2e-76 291.6 991 35.2
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 2.9e-76 291.2 1006 34.0
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 6.4e-76 290.0 986 31.7
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 1.9e-75 288.5 987 34.1
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 3.2e-75 287.7 1012 33.7
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 3.2e-75 287.7 991 36.2
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 4.1e-75 287.3 916 35.8
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 7.0e-75 286.6 994 36.0
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 1.6e-74 285.4 997 33.5
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 1.6e-74 285.4 1003 33.4
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 2.0e-74 285.0 975 33.5
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 2.0e-74 285.0 991 32.8
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 2.0e-74 285.0 998 33.9
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 2.7e-74 284.6 882 35.3
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 3.5e-74 284.3 991 36.2
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 3.5e-74 284.3 999 31.9
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 6.0e-74 283.5 1008 33.1
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.0e-73 282.7 956 34.8
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 1.3e-73 282.3 975 33.4
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 1.7e-73 282.0 1014 33.7
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 1.7e-73 282.0 1013 33.7
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.5e-72 278.9 1000 34.6
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.5e-72 278.9 1029 29.0
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 2.5e-72 278.1 792 36.6
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 3.3e-72 277.7 941 32.8
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 5.6e-72 276.9 994 33.4
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 9.5e-72 276.2 982 33.6
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 1.2e-71 275.8 958 32.0
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 2.1e-71 275.0 1026 32.6
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 2.1e-71 275.0 1026 32.4
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 2.8e-71 274.6 957 32.8
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 3.6e-71 274.2 980 34.2
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 4.7e-71 273.9 1014 33.4
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 8.1e-71 273.1 295 51.5
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.3e-70 271.6 1000 34.9
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 3.1e-70 271.2 1004 35.1
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 6.8e-70 270.0 1011 33.4
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.2e-69 269.2 812 35.2
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 1.5e-69 268.9 1038 31.2
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 2.0e-69 268.5 997 33.1
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 2.6e-69 268.1 994 32.1
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 3.4e-69 267.7 970 34.3
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.3e-68 265.8 942 33.7
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 1.3e-68 265.8 1005 32.6
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 1.7e-68 265.4 992 33.0
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 3.7e-68 264.2 992 32.1
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 8.3e-68 263.1 996 32.2
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 8.3e-68 263.1 1016 31.3
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 1.4e-67 262.3 981 33.6
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 3.2e-67 261.2 995 32.5
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 5.4e-67 260.4 864 35.6
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 5.4e-67 260.4 984 33.1
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 2.7e-66 258.1 846 31.2
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 3.5e-66 257.7 813 32.8
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 4.6e-66 257.3 283 49.5
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 1.7e-65 255.4 991 32.8
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 6.6e-65 253.4 994 31.4
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.5e-64 252.3 845 31.7
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.3e-64 251.1 949 33.2
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 4.3e-64 250.8 990 33.4
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 4.3e-64 250.8 982 33.2
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 7.3e-64 250.0 996 32.8
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 1.2e-63 249.2 856 34.7
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 2.3e-62 245.0 245 52.7
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.1e-62 244.6 994 31.8
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 5.2e-62 243.8 952 31.4
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 6.8e-62 243.4 859 35.5
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 8.9e-62 243.0 829 37.5
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 1.5e-61 242.3 955 30.6
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 2.0e-61 241.9 977 33.3
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 2.6e-61 241.5 952 31.5
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 2.6e-61 241.5 273 49.5
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 3.4e-61 241.1 836 36.0
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 7.6e-61 240.0 988 31.8
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.3e-60 239.2 946 29.0
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 1.7e-60 238.8 942 31.5
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 3.7e-60 237.7 839 33.7
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 4.9e-60 237.3 961 30.0
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 1.1e-59 236.1 977 32.9
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 1.4e-59 235.7 978 32.9
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.9e-59 235.3 266 49.2
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 3.2e-59 234.6 798 31.1
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 5.4e-59 233.8 839 32.9
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 9.2e-59 233.0 953 32.0
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 3.5e-58 231.1 955 30.8
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-57 229.2 918 31.6
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 1.3e-57 229.2 867 36.0
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 6.6e-57 226.9 963 33.4
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 1.1e-56 226.1 913 31.4
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 1.9e-56 225.3 280 47.9
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.2e-55 222.6 841 34.4
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.8e-55 221.5 830 31.1
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 5.2e-54 217.2 832 31.6
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 5.8e-53 213.8 860 33.5
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 6.4e-52 210.3 228 50.0
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 6.4e-52 210.3 171 62.6
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 1.1e-51 209.5 275 46.2
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 4.2e-51 207.6 223 51.6
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 7.1e-51 206.8 779 34.1
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 2.7e-50 204.9 784 33.9
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 3.5e-50 204.5 223 50.2
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 3.5e-50 204.5 963 30.5
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 7.8e-50 203.4 1008 29.8
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 2.3e-49 201.8 168 61.3
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.5e-48 199.1 880 30.8
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 2.5e-48 198.4 785 33.0
SEGI_26240 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.3e-48 197.6 601 32.9
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 7.3e-48 196.8 883 28.4
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 1.5e-45 189.1 895 32.0
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 5.8e-45 187.2 475 38.1
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 5.8e-45 187.2 895 31.8
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 3.2e-43 181.4 963 30.6
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 2.4e-38 165.2 259 41.3
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 3.4e-37 161.4 800 32.5
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 7.4e-32 143.7 930 27.5
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 2.8e-31 141.7 943 28.8
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 2.0e-29 135.6 97 70.1
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 5.8e-29 134.0 109 62.4
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.4e-27 129.4 600 29.7
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 3.0e-25 121.7 193 40.4
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 9.6e-24 116.7 868 26.3
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 1.8e-17 95.9 58 75.9
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 8.7e-17 93.6 827 28.5
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.3e-12 79.7 115 46.1
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 1.6e-10 72.8 189 32.3
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 1.8e-09 69.3 953 27.7
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 4.8e-07 61.2 547 24.7
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 5.3e-06 57.8 137 29.9


User provided reference genes

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