Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 1.0e-93 346.7 171 100.0
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 3.5e-57 225.3 169 61.5
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 4.6e-57 224.9 171 62.6
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 6.2e-54 214.5 171 59.6
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.8e-53 213.0 175 58.3
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.8e-53 213.0 175 58.3
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.0e-53 211.8 175 58.3
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 5.2e-53 211.5 170 59.4
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 5.2e-53 211.5 175 56.6
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 6.8e-53 211.1 173 58.4
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 1.2e-52 210.3 172 58.7
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.2e-52 210.3 175 57.7
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 1.5e-52 209.9 173 57.8
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.5e-52 209.9 175 57.7
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 7.6e-52 207.6 172 58.1
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 7.6e-52 207.6 173 58.4
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 9.9e-52 207.2 173 57.8
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 9.9e-52 207.2 175 56.6
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 9.9e-52 207.2 172 57.0
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 9.9e-52 207.2 175 57.1
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 2.9e-51 205.7 175 56.6
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 2.9e-51 205.7 173 56.1
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 3.7e-51 205.3 171 55.0
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 4.9e-51 204.9 173 57.2
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 6.4e-51 204.5 173 57.2
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 6.4e-51 204.5 175 56.0
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 6.4e-51 204.5 173 56.1
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 8.3e-51 204.1 173 56.6
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 1.1e-50 203.8 175 56.0
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.4e-50 203.4 173 57.8
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 2.4e-50 202.6 173 57.2
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 2.4e-50 202.6 170 57.1
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 3.2e-50 202.2 173 57.2
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 3.2e-50 202.2 173 55.5
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 4.1e-50 201.8 173 57.2
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 4.1e-50 201.8 172 55.8
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 7.1e-50 201.1 173 56.6
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 7.1e-50 201.1 173 55.5
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 1.2e-49 200.3 170 56.5
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.6e-49 199.9 173 56.6
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 2.7e-49 199.1 173 54.9
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 2.7e-49 199.1 172 54.7
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 3.5e-49 198.7 175 54.3
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 3.5e-49 198.7 173 54.3
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 4.6e-49 198.4 171 55.0
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 4.6e-49 198.4 173 55.5
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 7.8e-49 197.6 173 54.9
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 1.0e-48 197.2 173 54.3
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 1.3e-48 196.8 174 54.0
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 1.3e-48 196.8 173 54.3
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 1.3e-48 196.8 173 53.8
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 1.3e-48 196.8 174 55.7
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 1.7e-48 196.4 173 54.3
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 2.3e-48 196.1 173 52.6
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 2.3e-48 196.1 173 54.3
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 2.3e-48 196.1 172 56.4
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 2.3e-48 196.1 170 55.9
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 3.0e-48 195.7 173 53.8
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 3.0e-48 195.7 173 54.3
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 3.9e-48 195.3 173 54.3
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 3.9e-48 195.3 173 53.8
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 8.6e-48 194.1 172 53.5
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 1.9e-47 193.0 173 54.3
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 1.9e-47 193.0 171 54.4
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 2.5e-47 192.6 173 54.3
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 3.3e-47 192.2 172 52.9
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 5.6e-47 191.4 173 53.2
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 7.3e-47 191.0 192 51.6
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 9.6e-47 190.7 173 52.6
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 9.6e-47 190.7 174 52.9
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 9.6e-47 190.7 173 53.2
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 9.6e-47 190.7 173 52.6
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 1.2e-46 190.3 173 52.6
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 1.2e-46 190.3 173 52.6
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 1.6e-46 189.9 170 55.3
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 2.1e-46 189.5 170 55.3
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 3.6e-46 188.7 173 53.2
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 1.1e-45 187.2 173 52.0
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 1.4e-45 186.8 196 49.5
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 3.1e-45 185.7 173 51.4
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 3.1e-45 185.7 173 51.4
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 3.1e-45 185.7 173 51.4
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 4.0e-45 185.3 173 52.0
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 6.8e-45 184.5 173 51.4
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 6.8e-45 184.5 157 56.7
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 8.9e-45 184.1 174 52.3
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 8.9e-45 184.1 173 51.4
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 8.9e-45 184.1 173 51.4
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 1.2e-44 183.7 173 50.9
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 1.2e-44 183.7 203 47.8
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 1.5e-44 183.3 173 51.4
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 2.0e-44 183.0 174 51.7
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 2.0e-44 183.0 173 51.4
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 3.4e-44 182.2 173 51.4
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 4.4e-44 181.8 174 51.1
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 7.6e-44 181.0 173 50.9
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 1.4e-42 176.8 226 42.9
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 2.7e-41 172.6 174 51.1
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 4.6e-41 171.8 143 55.9
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 1.3e-40 170.2 177 49.2
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 3.9e-40 168.7 175 49.7
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 2.1e-38 162.9 246 39.8
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 1.8e-37 159.8 146 52.7
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 1.8e-37 159.8 175 46.3
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 3.4e-36 155.6 107 67.3
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 3.8e-35 152.1 112 62.5
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 3.8e-35 152.1 105 65.7
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 1.4e-34 150.2 105 66.7
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 2.4e-34 149.4 105 64.8
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 1.2e-33 147.1 118 56.8
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 1.1e-23 114.0 136 44.9
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 2.9e-19 99.4 129 41.1
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 2.3e-16 89.7 169 32.0
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 2.4e-13 79.7 165 29.1
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 6.3e-06 55.1 80 36.2
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 6.3e-06 55.1 44 50.0


User provided reference genes

Program Settings