Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.4e-45 186.0 102 100.0
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 3.3e-26 121.7 103 60.2
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 5.5e-26 120.9 103 59.2
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.2e-25 119.8 104 64.4
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 2.1e-25 119.0 104 59.6
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.1e-25 119.0 103 54.4
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.8e-25 118.6 102 58.8
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.8e-25 118.6 103 60.2
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 6.1e-25 117.5 100 54.0
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.0e-24 116.7 100 57.0
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.4e-24 116.3 103 56.3
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 3.0e-24 115.2 102 52.9
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 5.2e-24 114.4 103 57.3
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 5.2e-24 114.4 103 57.3
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 8.9e-24 113.6 100 63.0
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 8.9e-24 113.6 103 55.3
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.2e-23 113.2 103 57.3
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.2e-23 113.2 103 55.3
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.2e-23 113.2 103 57.3
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.0e-23 112.5 103 50.5
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 2.0e-23 112.5 102 54.9
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 3.4e-23 111.7 103 56.3
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 3.4e-23 111.7 104 63.5
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.4e-23 111.7 103 57.3
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 5.7e-23 110.9 105 54.3
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 7.5e-23 110.5 104 56.7
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 7.5e-23 110.5 102 53.9
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 7.5e-23 110.5 102 55.9
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 7.5e-23 110.5 102 57.8
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.3e-22 109.8 103 62.1
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.3e-22 109.8 100 55.0
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.8e-22 108.6 102 60.8
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.8e-22 108.6 102 54.9
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 3.7e-22 108.2 103 63.1
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 1.4e-21 106.3 103 51.5
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 3.1e-21 105.1 103 53.4
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 3.1e-21 105.1 102 58.8
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 4.1e-21 104.8 97 60.8
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 7.0e-21 104.0 104 58.7
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 7.0e-21 104.0 98 54.1
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 7.0e-21 104.0 98 54.1
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 9.2e-21 103.6 110 51.8
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.2e-20 103.2 103 60.2
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 1.2e-20 103.2 103 60.2
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.6e-20 102.8 97 53.6
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.6e-20 102.8 106 57.5
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 5.9e-20 100.9 103 59.2
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 7.8e-20 100.5 107 59.8
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 7.8e-20 100.5 101 58.4
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.0e-19 100.1 97 54.6
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 1.3e-19 99.8 109 52.3
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.3e-19 99.8 103 54.4
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.7e-19 99.4 101 50.5
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.9e-19 98.6 109 57.8
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 5.0e-19 97.8 107 54.2
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 5.0e-19 97.8 104 58.7
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 6.6e-19 97.4 110 52.7
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 8.6e-19 97.1 111 57.7
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 8.6e-19 97.1 93 53.8
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.1e-18 96.7 101 54.5
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 1.5e-18 96.3 105 55.2
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 2.5e-18 95.5 103 50.5
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 4.3e-18 94.7 97 45.4
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 5.6e-18 94.4 111 53.2
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 5.6e-18 94.4 111 53.2
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 5.6e-18 94.4 108 46.3
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 9.5e-18 93.6 110 57.3
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 9.5e-18 93.6 102 57.8
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 9.5e-18 93.6 102 57.8
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 9.5e-18 93.6 94 55.3
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 9.5e-18 93.6 108 56.5
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.2e-17 93.2 97 58.8
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 1.2e-17 93.2 95 55.8
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.2e-17 93.2 112 53.6
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 1.2e-17 93.2 101 46.5
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 1.2e-17 93.2 103 59.2
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.6e-17 92.8 112 54.5
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 2.1e-17 92.4 111 57.7
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 2.1e-17 92.4 112 55.4
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 2.1e-17 92.4 112 55.4
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 2.8e-17 92.0 113 50.4
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 2.8e-17 92.0 102 54.9
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 3.6e-17 91.7 107 53.3
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 3.6e-17 91.7 97 51.5
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 4.7e-17 91.3 105 47.6
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 6.1e-17 90.9 109 53.2
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 8.0e-17 90.5 105 51.4
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 8.0e-17 90.5 113 54.0
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 2.3e-16 89.0 109 53.2
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 2.3e-16 89.0 100 41.0
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 3.0e-16 88.6 113 55.8
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 3.0e-16 88.6 95 48.4
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 3.0e-16 88.6 114 57.0
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 3.0e-16 88.6 113 46.0
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.2e-15 86.7 91 62.6
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 2.0e-15 85.9 113 53.1
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.6e-15 85.5 108 52.8
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 7.5e-15 84.0 111 49.5
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 2.2e-14 82.4 106 53.8
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 2.2e-14 82.4 106 53.8
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 2.2e-14 82.4 91 49.5
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 4.9e-14 81.3 107 51.4
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 4.9e-14 81.3 105 52.4
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.1e-13 80.1 104 52.9
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 2.4e-13 79.0 110 50.0
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 3.5e-12 75.1 83 47.0
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 3.5e-12 75.1 85 49.4
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 1.0e-11 73.6 114 44.7
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 8.6e-11 70.5 91 52.7
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 1.1e-10 70.1 103 51.5
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 2.5e-10 68.9 103 50.5
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.3e-10 68.6 92 41.3
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 1.6e-09 66.2 65 58.5
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.1e-08 62.0 86 47.7
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.3e-06 56.6 80 52.5
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.2e-06 55.8 71 56.3
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 2.2e-06 55.8 79 54.4
MCO12G274 Micromonas commoda HOM05D006768 ORTHO05D008436 4.9e-06 54.7 101 45.5


User provided reference genes

Program Settings