Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36915 Sequoiadendron giganteum HOM05D004383 ORTHO05D005050 5.7e-95 350.9 177 100.0
ATR0580G398 Amborella trichopoda HOM05D004383 ORTHO05D005050 4.0e-72 275.0 175 75.4
PGR044G2662 Punica granatum HOM05D004383 ORTHO05D005050 1.5e-71 273.1 178 75.3
Duzib187G0841 Durio zibethinus HOM05D004383 ORTHO05D005050 2.6e-71 272.3 178 75.3
Prupe.1G396200 Prunus persica HOM05D004383 ORTHO05D005050 2.6e-71 272.3 167 76.6
RcHm_v2.0_Chr6g0299241 Rosa chinensis HOM05D004383 ORTHO05D005050 2.6e-71 272.3 167 77.2
Lj7A737G42 Lonicera japonica HOM05D004383 ORTHO05D005050 4.4e-71 271.6 173 76.3
GSVIVG01035992001 Vitis vinifera HOM05D004383 ORTHO05D005050 1.3e-70 270.0 167 76.6
FvH4_3g24420 Fragaria vesca HOM05D004383 ORTHO05D005050 1.7e-70 269.6 167 75.4
FAN21G1236 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.7e-70 269.6 167 75.4
Gohir.D06G105600 Gossypium hirsutum HOM05D004383 ORTHO05D005050 1.7e-70 269.6 167 75.4
FAN05G0819 Fragaria x ananassa HOM05D004383 ORTHO05D005050 2.2e-70 269.2 167 77.2
COL.COLO4_18979 Corchorus olitorius HOM05D002641 ORTHO05D005050 2.9e-70 268.9 167 76.0
ECA238G1890 Erigeron canadensis HOM05D004383 ORTHO05D005050 2.9e-70 268.9 166 76.5
CiPaw.08G004800 Carya illinoinensis HOM05D004383 ORTHO05D005050 3.7e-70 268.5 178 74.7
Cc00_g24580 Coffea canephora HOM05D004383 ORTHO05D005050 3.7e-70 268.5 165 78.8
Hma1.2p1_0355F.1_g133920 Hydrangea macrophylla HOM05D004383 ORTHO05D005050 3.7e-70 268.5 177 74.6
FvH4_6g27370 Fragaria vesca HOM05D004383 ORTHO05D005050 4.9e-70 268.1 167 76.6
Gorai.010G120200 Gossypium raimondii HOM05D004383 ORTHO05D005050 4.9e-70 268.1 167 74.9
MD15G1042900 Malus domestica HOM05D004383 ORTHO05D005050 6.4e-70 267.7 167 75.4
PSO017G0706 Papaver somniferum HOM05D004383 ORTHO05D005050 6.4e-70 267.7 179 73.7
PSO170G1218 Papaver somniferum HOM05D004383 ORTHO05D005050 6.4e-70 267.7 179 73.7
CDE02G0236 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 8.3e-70 267.3 175 73.1
CSS0047262 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 1.1e-69 266.9 178 73.0
FAN16G3501 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.1e-69 266.9 167 73.7
Gorai.009G064600 Gossypium raimondii HOM05D004383 ORTHO05D005050 1.1e-69 266.9 167 74.9
Lsat_1_v5_gn_8_16540 Lactuca sativa HOM05D004383 ORTHO05D005050 1.1e-69 266.9 164 78.0
CDE05G2494 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 1.4e-69 266.5 175 73.1
ECA233G1452 Erigeron canadensis HOM05D004383 ORTHO05D005050 1.4e-69 266.5 166 76.5
Gohir.A05G061400 Gossypium hirsutum HOM05D004383 ORTHO05D005050 1.4e-69 266.5 167 74.9
CSS0026414 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 3.2e-69 265.4 167 75.4
Eucgr.C04036 Eucalyptus grandis HOM05D004383 ORTHO05D005050 3.2e-69 265.4 167 73.7
MBI14_g31383_MAGBIO Magnolia biondii HOM05D004383 ORTHO05D005050 3.2e-69 265.4 178 72.5
Potri.006G266300 Populus trichocarpa HOM05D004383 ORTHO05D005050 3.2e-69 265.4 167 73.7
Thecc.09G012700 Theobroma cacao HOM05D004383 ORTHO05D005050 3.2e-69 265.4 167 74.9
TWI32G1179 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 3.2e-69 265.4 178 72.5
HanXRQChr12g0370101 Helianthus annuus HOM05D004383 ORTHO05D005050 4.1e-69 265.0 166 76.5
Manes.16G131700 Manihot esculenta HOM05D004383 ORTHO05D005050 4.1e-69 265.0 167 74.3
Nn3g19885 Nelumbo nucifera HOM05D004383 ORTHO05D005050 4.1e-69 265.0 176 72.7
Potri.018G016800 Populus trichocarpa HOM05D004383 ORTHO05D005050 4.1e-69 265.0 167 74.3
TAR625G0171 Trochodendron aralioides HOM05D004383 ORTHO05D005050 4.1e-69 265.0 177 73.4
TAR625G1552 Trochodendron aralioides HOM05D004383 ORTHO05D005050 4.1e-69 265.0 177 73.4
Aa31LG3G16320 Aethionema arabicum HOM05D004383 ORTHO05D005050 5.4e-69 264.6 168 74.4
MELO3C016948.2 Cucumis melo HOM05D004383 ORTHO05D005050 7.0e-69 264.2 177 73.4
Peaxi162Scf00045g01943 Petunia axillaris HOM05D004383 ORTHO05D005050 7.0e-69 264.2 176 73.9
CsaV3_4G036420 Cucumis sativus L. HOM05D004383 ORTHO05D005050 9.2e-69 263.8 177 73.4
Duzib168G1681 Durio zibethinus HOM05D004383 ORTHO05D005050 9.2e-69 263.8 166 74.1
Manes.03G007300 Manihot esculenta HOM05D004383 ORTHO05D005050 9.2e-69 263.8 167 74.3
Sed0012000 Sechium edule HOM05D004383 ORTHO05D005050 9.2e-69 263.8 178 73.0
Hund25610 Selenicereus undatus HOM05D004383 ORTHO05D005050 9.2e-69 263.8 167 75.4
CiPaw.07G231900 Carya illinoinensis HOM05D004383 ORTHO05D005050 1.2e-68 263.5 173 75.1
HanXRQChr07g0201211 Helianthus annuus HOM05D004383 ORTHO05D005050 1.2e-68 263.5 164 75.6
arahy.Tifrunner.gnm1.ann1.S5PPFL Arachis hypogaea HOM05D004383 ORTHO05D005050 1.6e-68 263.1 170 72.4
Gohir.D05G063900 Gossypium hirsutum HOM05D004383 ORTHO05D005050 1.6e-68 263.1 166 74.1
CANSAT64G0435 Cannabis sativa HOM05D004383 ORTHO05D005050 2.0e-68 262.7 167 73.7
arahy.Tifrunner.gnm1.ann1.W5C21C Arachis hypogaea HOM05D004383 ORTHO05D005050 3.5e-68 261.9 170 71.8
Atru.chr7.2584 Acer truncatum HOM05D004383 ORTHO05D005050 6.0e-68 261.2 167 74.3
FAN14G2933 Fragaria x ananassa HOM05D004383 ORTHO05D005050 6.0e-68 261.2 167 75.4
Os03g0360500 Oryza sativa ssp. japonica HOM05D004383 ORTHO05D005050 6.0e-68 261.2 176 73.3
Medtr1g013660 Medicago truncatula HOM05D004383 ORTHO05D005050 7.8e-68 260.8 171 71.9
Rhsim07G0166500 Rhododendron simsii HOM05D004383 ORTHO05D005050 1.3e-67 260.0 199 66.8
Phvul.001G042400 Phaseolus vulgaris HOM05D004383 ORTHO05D005050 2.3e-67 259.2 169 71.6
TPR.G38877 Trifolium pratense HOM05D004383 ORTHO05D005050 2.3e-67 259.2 173 71.1
CAN.G285.20 Capsicum annuum HOM05D004383 ORTHO05D005050 3.0e-67 258.8 165 74.5
Sed0009310 Sechium edule HOM05D004383 ORTHO05D005050 3.0e-67 258.8 178 71.9
Ca_13075_v3 Cicer arietinum L. HOM05D004383 ORTHO05D005050 3.9e-67 258.5 173 70.5
Migut.E01443 Erythranthe guttata HOM05D004383 ORTHO05D005050 3.9e-67 258.5 168 73.2
Psat6g025120 Pisum sativum HOM05D004383 ORTHO05D005050 3.9e-67 258.5 173 71.1
Solyc08g006650.3 Solanum lycopersicum HOM05D004383 ORTHO05D005050 3.9e-67 258.5 165 75.2
Actinidia14139 Actinidia chinensis HOM05D004383 ORTHO05D005050 6.6e-67 257.7 168 72.0
AL6G21360 Arabidopsis lyrata HOM05D004383 ORTHO05D005050 6.6e-67 257.7 168 72.0
AT5G10780 Arabidopsis thaliana HOM05D004383 ORTHO05D005050 6.6e-67 257.7 168 72.0
ClCG05G016150 Citrullus lanatus HOM05D004383 ORTHO05D005050 6.6e-67 257.7 166 73.5
Lj6g0009294 Lotus japonicus HOM05D004383 ORTHO05D005050 6.6e-67 257.7 165 73.3
CARHR202520 Cardamine hirsuta HOM05D004383 ORTHO05D005050 1.1e-66 256.9 168 71.4
BcaB01g06278 Brassica carinata HOM05D004383 ORTHO05D005050 1.5e-66 256.5 168 71.4
Sopen08g002600 Solanum pennellii HOM05D004383 ORTHO05D005050 1.5e-66 256.5 165 74.5
PGSC0003DMG400026285 Solanum tuberosum HOM05D004383 ORTHO05D005050 1.5e-66 256.5 165 74.5
THA.LOC104824960 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 1.5e-66 256.5 168 72.6
Zm00001eb394360 Zea mays HOM05D004383 ORTHO05D005050 1.5e-66 256.5 174 71.3
EL10Ac2g02480 Beta vulgaris HOM05D004383 ORTHO05D005050 1.9e-66 256.1 176 71.6
BcaB01g05499 Brassica carinata HOM05D004383 ORTHO05D005050 2.5e-66 255.8 168 72.0
C03p05470 Brassica napus HOM05D004383 ORTHO05D005050 2.5e-66 255.8 168 72.0
Carub.0006s0928 Capsella rubella HOM05D004383 ORTHO05D005050 2.5e-66 255.8 168 71.4
Thhalv10014802m.g Eutrema salsugineum HOM05D004383 ORTHO05D005050 2.5e-66 255.8 168 71.4
Sp6g32680 Schrenkiella parvula HOM05D004383 ORTHO05D005050 2.5e-66 255.8 168 71.4
VMungo0647G1739 Vigna mungo HOM05D004383 ORTHO05D005050 2.5e-66 255.8 169 70.4
Nitab4.5_0000264g0060 Nicotiana tabacum HOM05D004383 ORTHO05D005050 3.3e-66 255.4 165 73.9
Oeu010290.1 Olea europaea HOM05D004383 ORTHO05D005050 3.3e-66 255.4 167 70.7
BcaB05g21506 Brassica carinata HOM05D004383 ORTHO05D005050 4.3e-66 255.0 168 71.4
AUR62024788 Chenopodium quinoa HOM05D004383 ORTHO05D005050 4.3e-66 255.0 178 69.7
A03p04760 Brassica napus HOM05D004383 ORTHO05D005050 5.6e-66 254.6 169 71.6
Nn1g03128 Nelumbo nucifera HOM05D004383 ORTHO05D005050 5.6e-66 254.6 176 72.2
AUR62032433 Chenopodium quinoa HOM05D004383 ORTHO05D005050 9.5e-66 253.8 178 69.1
Glyma.17G222100 Glycine max HOM05D004383 ORTHO05D005050 9.5e-66 253.8 169 69.8
SGA_v2.0_scaffold4G02162 Striga asiatica HOM05D004383 ORTHO05D005050 1.6e-65 253.1 167 72.5
TWI34G1410 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 1.6e-65 253.1 177 70.6
Glyma.14G103800 Glycine max HOM05D004383 ORTHO05D005050 2.1e-65 252.7 169 69.8
QL02p018464 Quercus lobata HOM05D004383 ORTHO05D005050 2.1e-65 252.7 181 71.3
THA.LOC104799028 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 2.1e-65 252.7 168 71.4
Lalb_Chr24g0401921 Lupinus albus HOM05D004383 ORTHO05D005050 3.6e-65 251.9 170 69.4
BraA03t09816Z Brassica rapa HOM05D004383 ORTHO05D005050 4.7e-65 251.5 169 71.0
FAN02G2967 Fragaria x ananassa HOM05D004383 ORTHO05D005050 4.7e-65 251.5 156 78.2
MSTRG.13961 Avicennia marina HOM05D004383 ORTHO05D005050 6.2e-65 251.1 167 70.7
BcaC03g13332 Brassica carinata HOM05D004383 ORTHO05D005050 6.2e-65 251.1 169 71.0
A02p00660 Brassica napus HOM05D004383 ORTHO05D005050 6.2e-65 251.1 169 71.0
C02p04660 Brassica napus HOM05D004383 ORTHO05D005050 6.2e-65 251.1 169 71.0
SGA_v2.0_scaffold169G38599 Striga asiatica HOM05D004383 ORTHO05D005050 6.2e-65 251.1 178 68.5
Cpa.g.sc148.37 Carica papaya HOM05D004383 ORTHO05D005050 1.1e-64 250.4 166 73.5
Ciclev10009603m.g Citrus clementina HOM05D004383 ORTHO05D005050 1.4e-64 250.0 157 76.4
BraA02t05050Z Brassica rapa HOM05D004383 ORTHO05D005050 1.8e-64 249.6 169 70.4
Ah.12g060630 Amaranthus hybridus HOM05D004383 ORTHO05D005050 2.3e-64 249.2 175 70.3
Sabra18G0020200 Salix brachista HOM05D004383 ORTHO05D005050 2.3e-64 249.2 156 76.3
Sabra06G0208900 Salix brachista HOM05D004383 ORTHO05D005050 4.0e-64 248.4 156 75.6
vmacro05117 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 4.0e-64 248.4 166 73.5
CSS0025027 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 5.2e-64 248.1 166 72.9
DCAR_003054 Daucus carota HOM05D004383 ORTHO05D005050 5.2e-64 248.1 164 75.0
Migut.A00383 Erythranthe guttata HOM05D004383 ORTHO05D005050 6.8e-64 247.7 167 71.3
Oeu021906.1 Olea europaea HOM05D004383 ORTHO05D005050 1.2e-63 246.9 156 75.0
Nitab4.5_0001362g0040 Nicotiana tabacum HOM05D004383 ORTHO05D005050 7.5e-63 244.2 156 76.3
BolC3t13057H Brassica oleracea HOM05D004383 ORTHO05D005050 1.3e-62 243.4 166 71.7
Mapoly0039s0015 Marchantia polymorpha HOM05D004383 ORTHO05D005050 6.4e-62 241.1 170 67.1
Pp3c18_15950 Physcomitrium patens HOM05D004383 ORTHO05D005050 1.4e-61 240.0 174 67.2
SMO367G0045 Selaginella moellendorffii HOM05D004383 ORTHO05D005050 1.9e-61 239.6 170 65.3
BolC2t06425H Brassica oleracea HOM05D004383 ORTHO05D003478 3.2e-61 238.8 156 73.7
Haze_21384 Corylus avellana HOM05D004383 ORTHO05D005050 3.2e-61 238.8 183 66.7
unitig_32.g11121 Utricularia gibba HOM05D004383 ORTHO05D005050 5.4e-61 238.0 155 74.2
AagrBONN_evm.TU.Sc2ySwM_368.2778 Anthoceros agrestis HOM05D004383 ORTHO05D005050 7.1e-61 237.7 172 68.6
MD08G1052600 Malus domestica HOM05D004383 ORTHO05D005050 1.2e-60 236.9 166 69.9
SalBow8G1520 Salvia bowleyana HOM05D004383 ORTHO05D005050 3.5e-60 235.3 155 72.9
Sc23g0006160 Simmondsia chinensis HOM05D004383 ORTHO05D005050 2.2e-54 216.1 146 71.9
vmacro11269 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 3.2e-53 212.2 257 48.2
Dinv10290 Davidia involucrata HOM05D004383 ORTHO05D005050 4.1e-53 211.8 149 71.1
Actinidia10531 Actinidia chinensis HOM05D004383 ORTHO05D005050 1.6e-49 199.9 175 60.0
CBR_g29297 Chara braunii HOM05D004383 ORTHO05D005050 6.2e-49 198.0 169 56.8
BcaNung06638 Brassica carinata HOM05D004383 ORTHO05D005050 1.7e-43 179.9 139 64.0
Aqoxy7G03322 Aquilegia oxysepala HOM05D004383 ORTHO05D005050 3.4e-39 165.6 167 52.7
HPP92_021944 Vanilla planifolia HOM05D004383 ORTHO05D005050 1.3e-33 147.1 113 67.3
PRCOL_00000905 Prasinoderma coloniale HOM05D004383 ORTHO05D005050 2.0e-31 139.8 166 44.6
HPP92_021971 Vanilla planifolia HOM05D004383 ORTHO05D005050 4.5e-31 138.7 80 82.5
Dinv01903 Davidia involucrata HOM05D004383 ORTHO05D005050 1.7e-30 136.7 99 72.7
TAR383G0062 Trochodendron aralioides HOM05D004383 ORTHO05D005050 1.9e-29 133.3 100 72.0
MCO09G762 Micromonas commoda HOM05D004383 ORTHO05D005050 9.6e-26 120.9 175 36.0
TAR383G0705 Trochodendron aralioides HOM05D004383 ORTHO05D005050 1.3e-22 110.5 66 71.2
DCAR_031730 Daucus carota HOM05D004383 ORTHO05D005050 4.2e-21 105.5 100 57.0
CSS0012906 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 5.5e-21 105.1 54 90.7
Medtr8g027900 Medicago truncatula HOM05D000337 ORTHO05D000297 6.0e-20 101.7 51 94.1
CSS0013447 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 1.4e-16 90.5 57 66.7
Cre07.g351700 Chlamydomonas reinhardtii HOM05D004383 ORTHO05D005050 5.3e-16 88.6 168 32.1
Cfa024789 Carpinus fangiana HOM05D004383 ORTHO05D005050 6.9e-16 88.2 165 31.5
arahy.Tifrunner.gnm1.ann1.76P32W Arachis hypogaea HOM05D004383 ORTHO05D005050 9.0e-16 87.8 67 59.7
arahy.Tifrunner.gnm1.ann1.90HH72 Arachis hypogaea HOM05D004383 ORTHO05D005050 9.0e-16 87.8 67 59.7
DCAR_030622 Daucus carota HOM05D001936 ORTHO05D005050 2.6e-15 86.3 82 57.3
Lalb_Chr15g0080471 Lupinus albus HOM05D004383 ORTHO05D005050 3.5e-12 75.9 89 47.2
arahy.Tifrunner.gnm1.ann1.54XXT5 Arachis hypogaea HOM05D004383 ORTHO05D005050 3.0e-11 72.8 37 91.9
Lalb_Chr15g0078021 Lupinus albus HOM05D004383 ORTHO05D005050 1.9e-10 70.1 87 48.3
Atru.chr7.2578 Acer truncatum HOM05D004610 ORTHO05D001148 1.3e-09 67.4 51 66.7
Lalb_Chr10g0093521 Lupinus albus HOM05D004383 ORTHO05D005050 1.3e-09 67.4 38 86.8
Atru.chr7.2585 Acer truncatum HOM05D004383 ORTHO05D005050 2.2e-09 66.6 45 68.9
MD10G1133700 Malus domestica HOM05D004383 ORTHO05D005050 8.2e-09 64.7 35 82.9
Lalb_Chr01g0013281 Lupinus albus HOM05D004383 ORTHO05D005050 6.9e-08 61.6 50 60.0
MD10G1176800 Malus domestica HOM05D004383 ORTHO05D005050 9.0e-08 61.2 33 84.8
Oeu048647.1 Olea europaea HOM05D004383 ORTHO05D005050 1.5e-07 60.5 51 54.9


User provided reference genes

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