Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 7.9e-152 540.4 275 100.0
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 5.4e-108 394.8 350 63.7
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 3.2e-60 236.1 181 74.6
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 8.1e-48 194.9 186 61.3
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.1e-43 180.3 186 57.5
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 4.3e-41 172.6 178 54.5
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 4.3e-41 172.6 185 53.0
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 5.7e-41 172.2 181 53.0
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 9.6e-41 171.4 181 55.2
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 1.6e-40 170.6 185 52.4
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 1.6e-40 170.6 181 51.4
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 2.1e-40 170.2 181 53.0
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 2.8e-40 169.9 181 52.5
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 2.8e-40 169.9 182 53.3
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 2.8e-40 169.9 181 53.6
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 4.8e-40 169.1 185 53.0
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 6.3e-40 168.7 181 52.5
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 1.1e-39 167.9 181 52.5
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 1.4e-39 167.5 181 51.9
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.4e-39 167.5 181 51.9
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 1.4e-39 167.5 181 52.5
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 1.8e-39 167.2 185 50.3
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 1.8e-39 167.2 181 51.9
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 1.8e-39 167.2 181 53.6
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 2.4e-39 166.8 185 51.9
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 2.4e-39 166.8 185 51.9
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 2.4e-39 166.8 180 51.7
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 2.4e-39 166.8 181 53.0
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 3.1e-39 166.4 181 53.6
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 5.3e-39 165.6 185 50.8
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 5.3e-39 165.6 185 50.8
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 5.3e-39 165.6 185 50.8
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 5.3e-39 165.6 185 50.3
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 5.3e-39 165.6 181 54.7
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 5.3e-39 165.6 181 51.4
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 5.3e-39 165.6 180 52.2
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 9.0e-39 164.9 181 51.9
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 1.2e-38 164.5 185 50.8
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 1.2e-38 164.5 185 50.8
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 1.2e-38 164.5 185 50.3
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 1.5e-38 164.1 181 50.8
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 1.5e-38 164.1 181 51.9
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 2.0e-38 163.7 181 53.6
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 2.6e-38 163.3 180 51.1
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 2.6e-38 163.3 206 49.0
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 2.6e-38 163.3 181 50.8
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 4.5e-38 162.5 181 51.4
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 4.5e-38 162.5 183 52.5
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 4.5e-38 162.5 181 51.4
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 4.5e-38 162.5 203 48.8
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 5.9e-38 162.2 181 49.7
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 1.0e-37 161.4 179 53.1
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 1.3e-37 161.0 181 51.9
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 2.2e-37 160.2 181 51.4
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 3.8e-37 159.5 181 51.4
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 3.8e-37 159.5 181 49.2
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 5.0e-37 159.1 181 49.7
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 5.0e-37 159.1 181 50.8
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 6.5e-37 158.7 180 51.1
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 6.5e-37 158.7 181 51.4
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 8.4e-37 158.3 185 50.3
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 8.4e-37 158.3 181 50.8
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 1.1e-36 157.9 181 50.3
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 1.9e-36 157.1 181 50.8
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 2.5e-36 156.8 180 51.1
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 2.5e-36 156.8 181 51.4
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 3.2e-36 156.4 181 51.4
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 7.2e-36 155.2 181 50.3
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 7.2e-36 155.2 181 49.2
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 9.3e-36 154.8 181 50.3
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 9.3e-36 154.8 181 50.8
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 9.3e-36 154.8 181 49.2
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 9.3e-36 154.8 181 50.8
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 1.2e-35 154.5 181 49.7
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 2.1e-35 153.7 181 49.7
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 2.7e-35 153.3 181 50.3
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 2.7e-35 153.3 181 49.2
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 2.7e-35 153.3 181 48.1
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 3.5e-35 152.9 181 49.7
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 3.5e-35 152.9 181 48.1
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 6.1e-35 152.1 181 48.6
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 6.1e-35 152.1 185 47.6
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 7.9e-35 151.8 181 50.3
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 1.8e-34 150.6 181 49.2
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 1.8e-34 150.6 185 48.6
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 3.0e-34 149.8 181 48.6
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 3.0e-34 149.8 181 49.7
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 8.7e-34 148.3 181 49.7
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 8.7e-34 148.3 185 47.0
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 8.7e-34 148.3 181 48.1
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 1.1e-33 147.9 185 48.1
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 1.1e-33 147.9 181 47.0
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 1.5e-33 147.5 181 50.8
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 2.5e-33 146.7 183 47.0
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 4.3e-33 146.0 180 49.4
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 1.3e-32 144.4 181 49.2
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 1.6e-32 144.1 241 40.7
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 6.3e-32 142.1 185 45.4
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 7.7e-30 135.2 224 38.4
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 1.0e-29 134.8 110 60.0
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 1.2e-27 127.9 215 41.4
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 2.1e-27 127.1 181 45.3
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 3.6e-27 126.3 166 44.6
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 3.6e-27 126.3 111 55.0
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 1.0e-26 124.8 181 43.1
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 1.8e-26 124.0 182 45.1
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 9.7e-25 118.2 145 49.0
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 1.1e-23 114.8 181 43.6
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.4e-23 113.6 142 53.5
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 7.2e-20 102.1 186 38.2
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 1.2e-19 101.3 145 46.2
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 1.2e-19 101.3 125 51.2
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 2.3e-18 97.1 224 33.9
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 8.8e-18 95.1 159 40.9
SEGI_31046 Sequoiadendron giganteum HOM05D000073 ORTHO05D000033 2.6e-17 93.6 62 75.8
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 9.7e-17 91.7 87 49.4
SEGI_15935 Sequoiadendron giganteum HOM05D059367 ORTHO05D384589 1.3e-16 91.3 52 84.6
SEGI_19348 Sequoiadendron giganteum HOM05D002708 ORTHO05D037597 2.2e-13 80.5 61 63.9
SEGI_37350 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 1.1e-12 78.2 52 75.0
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 4.2e-12 76.3 121 40.5
SEGI_28126 Sequoiadendron giganteum HOM05D002886 ORTHO05D000093 9.4e-12 75.1 67 62.7
SEGI_00772 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 1.4e-10 71.2 43 81.4
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 4.1e-07 59.7 98 41.8
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 3.5e-06 56.6 148 33.1


User provided reference genes

Program Settings