Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 2.1e-48 195.7 91 100.0
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 4.8e-40 167.9 88 84.1
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 4.8e-40 167.9 88 84.1
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 6.2e-40 167.5 88 85.2
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 1.1e-39 166.8 88 85.2
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.4e-39 166.4 88 83.0
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 1.8e-39 166.0 88 83.0
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 1.8e-39 166.0 88 83.0
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 2.4e-39 165.6 88 84.1
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 2.4e-39 165.6 88 84.1
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 2.4e-39 165.6 88 84.1
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 3.1e-39 165.2 88 83.0
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.1e-39 165.2 88 83.0
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.1e-39 165.2 88 83.0
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.1e-39 165.2 88 83.0
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 3.1e-39 165.2 88 83.0
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 3.1e-39 165.2 88 83.0
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 3.1e-39 165.2 88 83.0
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 3.1e-39 165.2 88 83.0
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 4.0e-39 164.9 88 83.0
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 4.0e-39 164.9 88 81.8
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 4.0e-39 164.9 88 84.1
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 4.0e-39 164.9 88 84.1
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 5.3e-39 164.5 88 84.1
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 5.3e-39 164.5 88 81.8
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 5.3e-39 164.5 88 81.8
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 5.3e-39 164.5 88 81.8
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 5.3e-39 164.5 88 81.8
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 5.3e-39 164.5 88 81.8
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 5.3e-39 164.5 88 84.1
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 5.3e-39 164.5 89 82.0
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 5.3e-39 164.5 88 84.1
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 6.9e-39 164.1 88 81.8
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 6.9e-39 164.1 88 81.8
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 6.9e-39 164.1 88 83.0
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 6.9e-39 164.1 88 83.0
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 6.9e-39 164.1 88 83.0
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 6.9e-39 164.1 88 83.0
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 9.0e-39 163.7 88 80.7
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 9.0e-39 163.7 88 80.7
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 9.0e-39 163.7 88 80.7
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 9.0e-39 163.7 88 81.8
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.2e-38 163.3 88 80.7
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 1.2e-38 163.3 88 80.7
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.2e-38 163.3 88 80.7
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 1.2e-38 163.3 88 80.7
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.5e-38 162.9 88 80.7
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 1.5e-38 162.9 88 81.8
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.5e-38 162.9 88 80.7
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.5e-38 162.9 88 80.7
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 1.5e-38 162.9 88 80.7
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 2.0e-38 162.5 88 80.7
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 2.0e-38 162.5 88 81.8
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 2.6e-38 162.2 88 80.7
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 2.6e-38 162.2 88 81.8
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 2.6e-38 162.2 87 80.5
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.6e-38 162.2 88 79.5
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 3.4e-38 161.8 88 80.7
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 3.4e-38 161.8 88 79.5
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 3.4e-38 161.8 88 79.5
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 3.4e-38 161.8 88 79.5
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 3.4e-38 161.8 88 79.5
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 3.4e-38 161.8 88 79.5
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 3.4e-38 161.8 88 79.5
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 3.4e-38 161.8 88 79.5
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 4.5e-38 161.4 88 81.8
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 4.5e-38 161.4 88 80.7
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.5e-38 161.4 88 79.5
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 4.5e-38 161.4 88 80.7
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 4.5e-38 161.4 88 79.5
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 4.5e-38 161.4 88 79.5
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.5e-38 161.4 88 79.5
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 5.8e-38 161.0 88 79.5
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 5.8e-38 161.0 88 79.5
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.8e-38 161.0 88 80.7
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 7.6e-38 160.6 88 78.4
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 7.6e-38 160.6 88 80.7
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 7.6e-38 160.6 88 78.4
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 9.9e-38 160.2 88 79.5
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 1.3e-37 159.8 88 78.4
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 1.3e-37 159.8 88 79.5
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 1.3e-37 159.8 88 79.5
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 1.3e-37 159.8 88 77.3
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 1.3e-37 159.8 88 79.5
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 1.3e-37 159.8 88 79.5
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.3e-37 159.8 88 77.3
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.2e-37 159.1 88 79.5
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.2e-37 159.1 88 79.5
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 2.2e-37 159.1 88 78.4
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 2.9e-37 158.7 88 77.3
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.9e-37 158.7 87 78.2
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 3.8e-37 158.3 93 77.4
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 3.8e-37 158.3 88 78.4
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 3.8e-37 158.3 88 76.1
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 3.8e-37 158.3 88 77.3
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 6.4e-37 157.5 88 75.0
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 6.4e-37 157.5 88 77.3
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 6.4e-37 157.5 88 80.7
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 6.4e-37 157.5 88 78.4
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 8.4e-37 157.1 82 84.1
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.1e-36 156.8 87 77.0
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 1.1e-36 156.8 88 78.4
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 1.4e-36 156.4 81 86.4
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.4e-36 155.6 88 78.4
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 2.4e-36 155.6 88 75.0
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.2e-36 154.8 89 77.5
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 4.2e-36 154.8 82 81.7
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 5.5e-36 154.5 88 77.3
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 5.5e-36 154.5 88 76.1
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 7.1e-36 154.1 88 77.3
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 9.3e-36 153.7 81 82.7
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 9.3e-36 153.7 87 77.0
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 1.2e-35 153.3 87 78.2
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 2.1e-35 152.5 83 80.7
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 2.1e-35 152.5 87 78.2
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.0e-34 150.2 82 80.5
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.3e-34 149.8 82 80.5
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 1.3e-34 149.8 82 80.5
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.9e-34 148.3 82 78.0
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 1.1e-33 146.7 84 76.2
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 2.5e-33 145.6 86 75.6
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 3.3e-33 145.2 80 80.0
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 3.3e-33 145.2 77 83.1
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 4.3e-33 144.8 83 74.7
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 4.3e-33 144.8 80 78.8
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 9.6e-33 143.7 80 77.5
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 3.7e-32 141.7 80 78.8
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 3.7e-32 141.7 82 74.4
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 8.2e-32 140.6 75 82.7
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 2.4e-31 139.0 84 70.2
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 4.0e-31 138.3 88 73.9
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 3.2e-28 128.6 82 68.3
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 4.2e-28 128.3 74 68.9
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 9.3e-28 127.1 82 73.2
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 9.3e-28 127.1 78 70.5
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 1.2e-27 126.7 68 83.8
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 5.1e-26 121.3 77 70.1
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.1e-23 113.6 57 86.0
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 1.1e-23 113.6 70 77.1
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 6.9e-23 110.9 66 77.3
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 9.0e-23 110.5 70 71.4
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 2.2e-21 105.9 72 59.7
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 1.2e-19 100.1 75 60.0
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 3.6e-19 98.6 74 56.8
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 6.7e-18 94.4 49 83.7
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 8.8e-18 94.0 74 52.7
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.1e-17 93.6 51 80.4
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.5e-12 75.9 40 80.0
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 1.8e-10 69.7 35 91.4
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 3.3e-09 65.5 32 87.5
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 6.3e-08 61.2 35 77.1
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 1.5e-06 56.6 33 72.7


User provided reference genes

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