Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36836 Sequoiadendron giganteum HOM05D003537 ORTHO05D004180 2.5e-87 325.5 170 100.0
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 3.9e-24 115.5 83 66.3
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 6.6e-24 114.8 118 50.0
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 3.3e-23 112.5 133 51.1
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 4.3e-23 112.1 77 72.7
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 5.6e-23 111.7 136 52.9
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 7.3e-23 111.3 79 73.4
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 7.3e-23 111.3 79 75.9
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 9.6e-23 110.9 81 67.9
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 9.6e-23 110.9 128 53.9
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 9.6e-23 110.9 83 60.2
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 9.6e-23 110.9 85 56.5
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 1.2e-22 110.5 81 60.5
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 1.2e-22 110.5 83 67.5
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 1.6e-22 110.2 87 58.6
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 3.6e-22 109.0 83 59.0
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 3.6e-22 109.0 83 68.7
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 4.7e-22 108.6 120 46.7
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 4.7e-22 108.6 123 48.0
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.7e-22 108.6 83 59.0
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 4.7e-22 108.6 83 59.0
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 4.7e-22 108.6 78 74.4
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 4.7e-22 108.6 83 59.0
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 6.2e-22 108.2 115 49.6
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 6.2e-22 108.2 128 50.8
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 6.2e-22 108.2 83 59.0
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 6.2e-22 108.2 69 66.7
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 6.2e-22 108.2 69 66.7
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 8.1e-22 107.8 71 74.6
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 8.1e-22 107.8 82 58.5
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 1.1e-21 107.5 83 62.7
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 1.4e-21 107.1 89 55.1
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 1.8e-21 106.7 75 69.3
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 3.1e-21 105.9 83 57.8
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 3.1e-21 105.9 112 50.0
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 3.1e-21 105.9 143 44.1
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 3.1e-21 105.9 83 65.1
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 3.1e-21 105.9 82 61.0
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 4.0e-21 105.5 81 63.0
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 5.2e-21 105.1 133 42.1
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 5.2e-21 105.1 81 59.3
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 5.2e-21 105.1 115 47.8
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 6.9e-21 104.8 84 64.3
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 6.9e-21 104.8 83 56.6
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 8.9e-21 104.4 88 55.7
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 8.9e-21 104.4 83 60.2
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.2e-20 104.0 133 41.4
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 1.2e-20 104.0 109 51.4
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 1.5e-20 103.6 79 67.1
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 2.0e-20 103.2 133 46.6
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 2.0e-20 103.2 81 65.4
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 2.0e-20 103.2 69 69.6
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 2.6e-20 102.8 113 42.5
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.6e-20 102.8 81 56.8
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 2.6e-20 102.8 140 42.9
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 3.4e-20 102.4 81 67.9
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 4.4e-20 102.1 68 69.1
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 5.8e-20 101.7 69 62.3
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 9.9e-20 100.9 81 65.4
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 1.7e-19 100.1 81 66.7
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 1.7e-19 100.1 81 64.2
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 2.2e-19 99.8 118 45.8
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 2.9e-19 99.4 77 70.1
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 3.8e-19 99.0 83 66.3
GSVIVG01015534001 Vitis vinifera HOM05D003537 ORTHO05D004180 4.9e-19 98.6 70 62.9
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 6.4e-19 98.2 83 66.3
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 6.4e-19 98.2 137 49.6
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 8.4e-19 97.8 81 54.3
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 1.1e-18 97.4 83 66.3
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 1.1e-18 97.4 69 58.0
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 1.4e-18 97.1 77 57.1
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 1.4e-18 97.1 69 63.8
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 1.9e-18 96.7 67 71.6
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 3.2e-18 95.9 94 47.9
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 3.2e-18 95.9 77 66.2
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 5.4e-18 95.1 139 48.2
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 5.4e-18 95.1 125 40.8
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 1.6e-17 93.6 147 40.8
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 2.1e-17 93.2 133 49.6
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 3.5e-17 92.4 101 45.5
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 3.5e-17 92.4 81 63.0
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 2.3e-16 89.7 78 53.8
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 2.3e-16 89.7 78 53.8
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 2.3e-16 89.7 78 53.8
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 5.1e-16 88.6 78 52.6
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 6.6e-16 88.2 121 43.0
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 6.6e-16 88.2 75 69.3
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 6.6e-16 88.2 91 57.1
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 6.6e-16 88.2 83 62.7
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 8.7e-16 87.8 81 63.0
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 2.5e-15 86.3 85 51.8
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 4.3e-15 85.5 79 54.4
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 1.6e-14 83.6 81 60.5
Lsat_1_v5_gn_5_30800 Lactuca sativa HOM05D003537 ORTHO05D004180 3.6e-14 82.4 71 52.1
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 3.6e-14 82.4 132 40.9
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 4.8e-14 82.0 83 59.0
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 4.8e-14 82.0 77 59.7
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 1.4e-13 80.5 138 42.8
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 1.4e-13 80.5 101 44.6
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 1.8e-13 80.1 83 59.0
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 3.1e-13 79.3 87 57.5
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 3.1e-13 79.3 94 50.0
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 4.0e-13 79.0 83 48.2
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 9.0e-13 77.8 82 50.0
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 9.0e-13 77.8 109 45.0
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 1.2e-12 77.4 83 57.8
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 1.2e-12 77.4 119 46.2
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.5e-12 77.0 96 42.7
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 2.6e-12 76.3 83 55.4
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 2.6e-12 76.3 118 39.8
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 2.6e-12 76.3 118 39.8
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 4.5e-12 75.5 81 54.3
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 4.5e-12 75.5 83 54.2
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 5.8e-12 75.1 108 40.7
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 5.8e-12 75.1 83 44.6
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 5.8e-12 75.1 69 60.9
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 7.6e-12 74.7 82 54.9
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 1.3e-11 73.9 83 53.0
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 1.3e-11 73.9 84 46.4
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 1.7e-11 73.6 73 57.5
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 2.2e-11 73.2 102 43.1
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 2.9e-11 72.8 111 45.9
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 2.9e-11 72.8 83 45.8
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 4.9e-11 72.0 83 41.0
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 4.9e-11 72.0 81 54.3
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 6.4e-11 71.6 127 39.4
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 8.4e-11 71.2 81 55.6
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 8.4e-11 71.2 81 55.6
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 8.4e-11 71.2 81 55.6
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 8.4e-11 71.2 86 50.0
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 8.4e-11 71.2 83 44.6
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 1.1e-10 70.9 80 48.8
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 1.1e-10 70.9 105 40.0
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 1.9e-10 70.1 75 56.0
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 1.9e-10 70.1 83 50.6
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 2.4e-10 69.7 83 49.4
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 4.2e-10 68.9 83 51.8
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 4.2e-10 68.9 81 51.9
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 4.2e-10 68.9 119 37.0
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 4.2e-10 68.9 82 50.0
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 5.4e-10 68.6 153 37.9
C03p67010 Brassica napus HOM05D003537 ORTHO05D004180 7.1e-10 68.2 81 43.2
BolC3t18976H Brassica oleracea HOM05D003537 ORTHO05D004180 7.1e-10 68.2 81 43.2
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 7.1e-10 68.2 140 35.0
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 7.1e-10 68.2 81 51.9
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 9.3e-10 67.8 127 37.0
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 9.3e-10 67.8 83 49.4
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 9.3e-10 67.8 83 50.6
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 1.2e-09 67.4 81 48.1
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 1.2e-09 67.4 81 48.1
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 1.2e-09 67.4 81 40.7
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 1.2e-09 67.4 81 42.0
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 1.2e-09 67.4 81 48.1
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 1.2e-09 67.4 81 45.7
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 1.2e-09 67.4 81 40.7
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 1.2e-09 67.4 140 34.3
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 1.2e-09 67.4 143 33.6
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 1.6e-09 67.0 115 38.3
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 2.7e-09 66.2 126 39.7
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 4.6e-09 65.5 146 37.7
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 1.0e-08 64.3 127 37.0
DCAR_003091 Daucus carota HOM05D003537 ORTHO05D004180 1.0e-08 64.3 56 69.6
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 3.0e-08 62.8 69 40.6
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 3.0e-08 62.8 69 40.6
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 3.9e-08 62.4 69 49.3
FAN26G0344 Fragaria x ananassa HOM05D003537 ORTHO05D004180 3.9e-08 62.4 55 65.5
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 5.1e-08 62.0 81 40.7
Thhalv10010812m.g Eutrema salsugineum HOM05D003537 ORTHO05D004180 5.1e-08 62.0 109 35.8
Gohir.D08G087900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 5.1e-08 62.0 70 45.7
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 6.7e-08 61.6 69 40.6
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 1.1e-07 60.8 134 32.8
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 1.1e-07 60.8 71 43.7
CSS0006865 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 1.5e-07 60.5 44 61.4
CSS0026750 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 1.5e-07 60.5 44 61.4
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 1.9e-07 60.1 69 43.5
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 1.9e-07 60.1 69 43.5
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 3.3e-07 59.3 82 36.6
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 4.3e-07 58.9 78 37.2
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 2.1e-06 56.6 69 39.1
MCO09G833 Micromonas commoda HOM05D001438 ORTHO05D001336 8.1e-06 54.7 50 42.0


User provided reference genes

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